RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 TBC1D10CQ8IV04 446 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 DIS3L2Q8IYB7 885 aaKnown RBP11.06□□□□□ -0.64
CMSS1-201ENST00000421999 DCP1AQ9NPI6 582 aaPredicted RBP11.06□□□□□ -0.64
CMSS1-201ENST00000421999 DDX19AQ9NUU7 478 aaKnown RBP11.06□□□□□ -0.64
CMSS1-201ENST00000421999 POLLQ9UGP5 575 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 LARGE1O95461 756 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 APOA5Q6Q788 366 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 DTHD1Q6ZMT9 781 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 PYM1Q9BRP8 204 aaKnown RBP11.06□□□□□ -0.64
CMSS1-201ENST00000421999 SPTLC2O15270 562 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 MTIF2P46199 727 aaKnown RBP11.06□□□□□ -0.64
CMSS1-201ENST00000421999 ASIC1P78348 528 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 ZNF174Q15697 407 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 FKBP15Q5T1M5 1219 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 CCDC183Q5T5S1 534 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 KRT40Q6A162 431 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 CACNA2D4Q7Z3S7 1137 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 VPS54Q9P1Q0 977 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 AHDC1Q5TGY3 1603 aaPredicted RBP11.06□□□□□ -0.64
CMSS1-201ENST00000421999 RGPD2P0DJD1 1756 aa11.06□□□□□ -0.64
CMSS1-201ENST00000421999 FGFR1OPO95684 399 aaKnown RBP11.05□□□□□ -0.64
CMSS1-201ENST00000421999 CETN1Q12798 172 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 PIK3AP1Q6ZUJ8 805 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 TICAM2Q86XR7 235 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 SLC44A5Q8NCS7 719 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 DHX58Q96C10 678 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 ZNF512BQ96KM6 892 aaPredicted RBP11.05□□□□□ -0.64
CMSS1-201ENST00000421999 LRRC27Q9C0I9 530 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 FGFR2P21802 821 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 USP8P40818 1118 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 PABPC4Q13310 644 aaKnown RBP eCLIP11.05□□□□□ -0.64
CMSS1-201ENST00000421999 STYK1Q6J9G0 422 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 CAGE1Q8TC20 777 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 EXOC1Q9NV70 894 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 FRMPD2Q68DX3 1309 aaPredicted RBP11.05□□□□□ -0.64
CMSS1-201ENST00000421999 RGPD5Q99666 1765 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 MROH7-TTC4A0A0A0MT08 1334 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 FAM196BA6NMK8 535 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 CTAGE5O15320 804 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 SLFN13Q68D06 897 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 ARMC9Q7Z3E5 817 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 CCDC17Q96LX7 622 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 MMRN2Q9H8L6 949 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 ZBTB12Q9Y330 459 aaPredicted RBP11.05□□□□□ -0.64
CMSS1-201ENST00000421999 SALL3Q9BXA9 1300 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 ONECUT3O60422 494 aaPredicted RBP11.05□□□□□ -0.64
CMSS1-201ENST00000421999 PCP11498 1178 aaKnown RBP11.05□□□□□ -0.64
CMSS1-201ENST00000421999 SSR1P43307 286 aaKnown RBP11.05□□□□□ -0.64
CMSS1-201ENST00000421999 PPP2R5BQ15173 497 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 KLHL40Q2TBA0 621 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 KANK3Q6NY19 840 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 FAM177A1Q8N128 213 aaPredicted RBP11.05□□□□□ -0.64
CMSS1-201ENST00000421999 CHAMP1Q96JM3 812 aa11.05□□□□□ -0.64
CMSS1-201ENST00000421999 RRAGBQ5VZM2 374 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 BRAPQ7Z569 592 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 CCDC150Q8NCX0 1101 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 MNS1Q8NEH6 495 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 TDRD7Q8NHU6 1098 aaKnown RBP11.04□□□□□ -0.64
CMSS1-201ENST00000421999 TMEM232C9JQI7 657 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 KLRF2D3W0D1 207 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 DDX39AO00148 427 aaKnown RBP11.04□□□□□ -0.64
CMSS1-201ENST00000421999 KIF22Q14807 665 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 ANKRD35Q8N283 1001 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 MTFR1LQ9H019 292 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 DACT1Q9NYF0 836 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 STRCP1A6NGW2 1772 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 ALS2Q96Q42 1657 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 PHRF1Q9P1Y6 1649 aaKnown RBP11.04□□□□□ -0.64
CMSS1-201ENST00000421999 VWA3AA6NCI4 1184 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 CDK8P49336 464 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 GOLGA6L1Q8N7Z2 621 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 PI4KBQ9UBF8 816 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 RFX7Q2KHR2 1363 aa11.04□□□□□ -0.64
CMSS1-201ENST00000421999 RGL2O15211 777 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 CNGA1P29973 690 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 NCBP1Q09161 790 aaKnown RBP11.03□□□□□ -0.64
CMSS1-201ENST00000421999 GIMAP6Q6P9H5 292 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 NCAPG2Q86XI2 1143 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 MRPS27Q92552 414 aaKnown RBP11.03□□□□□ -0.64
CMSS1-201ENST00000421999 POTEJP0CG39 1038 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 TRIM47Q96LD4 638 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 GRPEL1Q9HAV7 217 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 PARP4Q9UKK3 1724 aaKnown RBP11.03□□□□□ -0.64
CMSS1-201ENST00000421999 ZMYM6O95789 1325 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 NEDD4P46934 1319 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 TOP1P11387 765 aaKnown RBP11.03□□□□□ -0.64
CMSS1-201ENST00000421999 TXKP42681 527 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 ADCY7P51828 1080 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 GRIPAP1Q4V328 841 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 CTR9Q6PD62 1173 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 SLC10A4Q96EP9 437 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 DNAI2Q9GZS0 605 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 GLT8D2Q9H1C3 349 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 TAF6LQ9Y6J9 622 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 TRPM3Q9HCF6 1732 aaPredicted RBP11.03□□□□□ -0.64
CMSS1-201ENST00000421999 SH2B2O14492 632 aaPredicted RBP11.03□□□□□ -0.64
CMSS1-201ENST00000421999 BRD1O95696 1058 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 TM4SF1P30408 202 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 DHX36Q9H2U1 1008 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms