RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
PTCH1-206ENST00000421141 SOS2Q07890 1332 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-206ENST00000421141 TMOD1P28289 359 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 SLFN12Q8IYM2 578 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 ERLIN1O75477 346 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 TMED8Q6PL24 325 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-206ENST00000421141 KANSL2Q9H9L4 492 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 KIF2AO00139 706 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-206ENST00000421141 HARSP12081 509 aaKnown RBP12.07□□□□□ -0.48
PTCH1-206ENST00000421141 TNNT1P13805 278 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 TRPC3Q13507 836 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 BRIP1Q9BX63 1249 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 CNPY2Q9Y2B0 182 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 KDM3AQ9Y4C1 1321 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 SMCO2A6NFE2 343 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 ZNF165P49910 485 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 SLFN13Q68D06 897 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 PODNQ7Z5L7 613 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 ZNF654Q8IZM8 581 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 REREQ9P2R6 1566 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 LMAN1P49257 510 aa12.07□□□□□ -0.48
PTCH1-206ENST00000421141 PABPN1LA6NDY0 278 aaKnown RBP12.06□□□□□ -0.48
PTCH1-206ENST00000421141 TXKP42681 527 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 DDAH1O94760 285 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 CPLX3Q8WVH0 158 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 SNX16P57768 344 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 GALNT17Q6IS24 598 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 EAF2Q96CJ1 260 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-206ENST00000421141 CENPHQ9H3R5 247 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 PALD1Q9ULE6 856 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 ELP1O95163 1332 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 DNM1Q05193 864 aaKnown RBP12.06□□□□□ -0.48
PTCH1-206ENST00000421141 OTUD7AQ8TE49 926 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-206ENST00000421141 PUS3Q9BZE2 481 aaKnown RBP12.06□□□□□ -0.48
PTCH1-206ENST00000421141 ZNF277Q9NRM2 450 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-206ENST00000421141 GSTTP1A0A1W2PQM5 241 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 TMCO5BA8MYB1 307 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 TMEM232C9JQI7 657 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 TTC38Q5R3I4 469 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 AXDND1Q5T1B0 1012 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-206ENST00000421141 GOLGA1Q92805 767 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 PHKBQ93100 1093 aa12.06□□□□□ -0.48
PTCH1-206ENST00000421141 PAFAH1B1P43034 410 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 UBASH3AP57075 661 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 CEP135Q66GS9 1140 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 KIFAP3Q92845 792 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 KDM4FA0A1W2PPD8 638 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 PALM3A6NDB9 673 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-206ENST00000421141 ASNSP08243 561 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 PLIN2Q99541 437 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 DCAF17Q5H9S7 520 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-206ENST00000421141 LUZP1Q86V48 1076 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 PRPHP41219 470 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 BIRC3Q13489 604 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 FAM160B1Q5W0V3 765 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 EHBP1Q8NDI1 1231 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 CDC37L1Q7L3B6 337 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 MAP7D2Q96T17 732 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 HOXD10P28358 340 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 SPICE1Q8N0Z3 855 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 TECPR2O15040 1411 aa12.05□□□□□ -0.48
PTCH1-206ENST00000421141 HSPD1P10809 573 aaKnown RBP12.04□□□□□ -0.48
PTCH1-206ENST00000421141 TBC1D10BQ4KMP7 808 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-206ENST00000421141 SP8Q8IXZ3 490 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 TTLL11Q8NHH1 800 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 NT5C3AQ9H0P0 336 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 NEMFO60524 1076 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 MCM3P25205 808 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 TMC6Q7Z403 805 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 RSPH3Q86UC2 560 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 CCDC112Q8NEF3 446 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 FGAP02671 866 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 PRPF4BQ13523 1007 aaKnown RBP12.04□□□□□ -0.48
PTCH1-206ENST00000421141 NEK11Q8NG66 645 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 MINPP1Q9UNW1 487 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 COMMD10Q9Y6G5 202 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 MECOMQ03112 1051 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 MKRN3Q13064 507 aaKnown RBP12.04□□□□□ -0.48
PTCH1-206ENST00000421141 SLC16A10Q8TF71 515 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 SSX2IPQ9Y2D8 614 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 EZRP15311 586 aaKnown RBP12.04□□□□□ -0.48
PTCH1-206ENST00000421141 MIER3Q7Z3K6 550 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 MRPL44Q9H9J2 332 aaKnown RBP12.04□□□□□ -0.48
PTCH1-206ENST00000421141 MIGA2Q7L4E1 593 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 SNX14Q9Y5W7 946 aa12.04□□□□□ -0.48
PTCH1-206ENST00000421141 CRKP46108 304 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 MAEAQ7L5Y9 396 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 NAA15Q9BXJ9 866 aaKnown RBP12.03□□□□□ -0.48
PTCH1-206ENST00000421141 GOLGA6L9A6NEM1 432 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 IWS1Q96ST2 819 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 MYL10Q9BUA6 226 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 TPH2Q8IWU9 490 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 MYCT1Q8N699 235 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 SNX29Q8TEQ0 813 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 AMNQ9BXJ7 453 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 NACA2Q9H009 215 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 USP25Q9UHP3 1055 aa12.03□□□□□ -0.48
PTCH1-206ENST00000421141 NCOA5Q9HCD5 579 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms