RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 TMTC2Q8N394 836 aa14.68□□□□□ -0.06
TMEM53-206ENST00000420706 ENAHQ8N8S7 591 aaPredicted RBP14.68□□□□□ -0.06
TMEM53-206ENST00000420706 SMC1BQ8NDV3 1235 aa14.68□□□□□ -0.06
TMEM53-206ENST00000420706 RBM46Q8TBY0 533 aaKnown RBP14.68□□□□□ -0.06
TMEM53-206ENST00000420706 ZKSCAN4Q969J2 545 aaPredicted RBP14.68□□□□□ -0.06
TMEM53-206ENST00000420706 ZNF408Q9H9D4 720 aa14.68□□□□□ -0.06
TMEM53-206ENST00000420706 KANSL2Q9H9L4 492 aa14.68□□□□□ -0.06
TMEM53-206ENST00000420706 LY9Q9HBG7 655 aa14.68□□□□□ -0.06
TMEM53-206ENST00000420706 SENP2Q9HC62 589 aa14.68□□□□□ -0.06
TMEM53-206ENST00000420706 MTMR4Q9NYA4 1195 aa14.68□□□□□ -0.06
TMEM53-206ENST00000420706 ZBTB21Q9ULJ3 1066 aa14.68□□□□□ -0.06
TMEM53-206ENST00000420706 CELF2O95319 508 aaKnown RBP14.67□□□□□ -0.06
TMEM53-206ENST00000420706 CD2BP2O95400 341 aaKnown RBP14.67□□□□□ -0.06
TMEM53-206ENST00000420706 ASNSP08243 561 aa14.67□□□□□ -0.06
TMEM53-206ENST00000420706 FGD1P98174 961 aa14.67□□□□□ -0.06
TMEM53-206ENST00000420706 TTLL12Q14166 644 aaPredicted RBP14.67□□□□□ -0.06
TMEM53-206ENST00000420706 RAB3GAP1Q15042 981 aa14.67□□□□□ -0.06
TMEM53-206ENST00000420706 ANKRD1Q15327 319 aa14.67□□□□□ -0.06
TMEM53-206ENST00000420706 NOL9Q5SY16 702 aaKnown RBP14.67□□□□□ -0.06
TMEM53-206ENST00000420706 SIAH1Q8IUQ4 282 aa14.67□□□□□ -0.06
TMEM53-206ENST00000420706 SCYL3Q8IZE3 742 aa14.67□□□□□ -0.06
TMEM53-206ENST00000420706 BRF1Q92994 677 aa14.67□□□□□ -0.06
TMEM53-206ENST00000420706 SNX21Q969T3 373 aa14.67□□□□□ -0.06
TMEM53-206ENST00000420706 LARP6Q9BRS8 491 aaKnown RBP14.67□□□□□ -0.06
TMEM53-206ENST00000420706 NYAP2Q9P242 653 aa14.67□□□□□ -0.06
TMEM53-206ENST00000420706 PASKQ96RG2 1323 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 UBE2Q2LH0YL09 131 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 EVCP57679 992 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 FKBP1BP68106 108 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 APOBRQ0VD83 1088 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 PPP4R3BQ5MIZ7 849 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 IFIT1BQ5T764 474 aaKnown RBP14.66□□□□□ -0.06
TMEM53-206ENST00000420706 CST9Q5W186 159 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 SGMS1Q86VZ5 419 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 CLEC10AQ8IUN9 316 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 MKL1Q969V6 931 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 TMEM47Q9BQJ4 181 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 GBA2Q9HCG7 927 aaPredicted RBP14.66□□□□□ -0.06
TMEM53-206ENST00000420706 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.66□□□□□ -0.06
TMEM53-206ENST00000420706 CLIP2Q9UDT6 1046 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 STX8Q9UNK0 236 aa14.66□□□□□ -0.06
TMEM53-206ENST00000420706 ATAD5Q96QE3 1844 aa14.65□□□□□ -0.06
TMEM53-206ENST00000420706 USP17L5A8MUK1 530 aa14.65□□□□□ -0.06
TMEM53-206ENST00000420706 TTLL1O95922 423 aa14.65□□□□□ -0.06
TMEM53-206ENST00000420706 EEF2P13639 858 aaKnown RBP14.65□□□□□ -0.06
TMEM53-206ENST00000420706 MCM2P49736 904 aa14.65□□□□□ -0.06
TMEM53-206ENST00000420706 ICA1Q05084 483 aa14.65□□□□□ -0.06
TMEM53-206ENST00000420706 LDLRAD1Q5T700 205 aa14.65□□□□□ -0.06
TMEM53-206ENST00000420706 ANKRD13AQ8IZ07 590 aa14.65□□□□□ -0.06
TMEM53-206ENST00000420706 C2orf69Q8N8R5 385 aa14.65□□□□□ -0.06
TMEM53-206ENST00000420706 BRPF3Q9ULD4 1205 aa14.65□□□□□ -0.06
TMEM53-206ENST00000420706 SNCAIPQ9Y6H5 919 aa14.65□□□□□ -0.06
TMEM53-206ENST00000420706 TRPM7Q96QT4 1865 aa14.65□□□□□ -0.06
TMEM53-206ENST00000420706 DOCK1Q14185 1865 aa14.64□□□□□ -0.07
TMEM53-206ENST00000420706 CCDC69A6NI79 296 aa14.64□□□□□ -0.07
TMEM53-206ENST00000420706 UNCXA6NJT0 531 aa14.64□□□□□ -0.07
TMEM53-206ENST00000420706 TOP1P11387 765 aaKnown RBP14.64□□□□□ -0.07
TMEM53-206ENST00000420706 PTPRAP18433 802 aa14.64□□□□□ -0.07
TMEM53-206ENST00000420706 VGLL4Q14135 290 aa14.64□□□□□ -0.07
TMEM53-206ENST00000420706 NFXL1Q6ZNB6 911 aa14.64□□□□□ -0.07
TMEM53-206ENST00000420706 NOL8Q76FK4 1167 aaKnown RBP14.64□□□□□ -0.07
TMEM53-206ENST00000420706 CCDC84Q86UT8 332 aaPredicted RBP14.64□□□□□ -0.07
TMEM53-206ENST00000420706 KAT14Q9H8E8 782 aa14.64□□□□□ -0.07
TMEM53-206ENST00000420706 PICK1Q9NRD5 415 aa14.64□□□□□ -0.07
TMEM53-206ENST00000420706 TPCN1Q9ULQ1 816 aa14.64□□□□□ -0.07
TMEM53-206ENST00000420706 LIMCH1Q9UPQ0 1083 aa14.64□□□□□ -0.07
TMEM53-206ENST00000420706 CSADQ9Y600 493 aa14.64□□□□□ -0.07
TMEM53-206ENST00000420706 PAPPA2Q9BXP8 1791 aa14.63□□□□□ -0.07
TMEM53-206ENST00000420706 KLF18A0A0U1RQI7 1052 aa14.63□□□□□ -0.07
TMEM53-206ENST00000420706 A0A1W2PRG0 241 aa14.63□□□□□ -0.07
TMEM53-206ENST00000420706 ATP2B2Q01814 1243 aa14.63□□□□□ -0.07
TMEM53-206ENST00000420706 FSTL1Q12841 308 aa14.63□□□□□ -0.07
TMEM53-206ENST00000420706 ACER1Q8TDN7 264 aa14.63□□□□□ -0.07
TMEM53-206ENST00000420706 ZNF274Q96GC6 653 aaPredicted RBP14.63□□□□□ -0.07
TMEM53-206ENST00000420706 ZSCAN31Q96LW9 406 aaPredicted RBP14.63□□□□□ -0.07
TMEM53-206ENST00000420706 ARHGEF10LQ9HCE6 1279 aa14.63□□□□□ -0.07
TMEM53-206ENST00000420706 SLC12A7Q9Y666 1083 aa14.63□□□□□ -0.07
TMEM53-206ENST00000420706 ZHX2Q9Y6X8 837 aa14.63□□□□□ -0.07
TMEM53-206ENST00000420706 OTOFQ9HC10 1997 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 PDIA3P30101 505 aaKnown RBP14.62□□□□□ -0.07
TMEM53-206ENST00000420706 ECE1P42892 770 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 ME3Q16798 604 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 APOA5Q6Q788 366 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 SYNE3Q6ZMZ3 975 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 ZNF654Q8IZM8 581 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 PNMA1Q8ND90 353 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 CLMNQ96JQ2 1002 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 WDR18Q9BV38 432 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 TBC1D2Q9BYX2 928 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 ELP3Q9H9T3 547 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 AS3MTQ9HBK9 375 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.62□□□□□ -0.07
TMEM53-206ENST00000420706 TMX2Q9Y320 296 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 MYH4Q9Y623 1939 aa14.62□□□□□ -0.07
TMEM53-206ENST00000420706 LARGE1O95461 756 aa14.61□□□□□ -0.07
TMEM53-206ENST00000420706 PPATQ06203 517 aa14.61□□□□□ -0.07
TMEM53-206ENST00000420706 TROAPQ12815 778 aa14.61□□□□□ -0.07
TMEM53-206ENST00000420706 CATIPQ7Z7H3 387 aa14.61□□□□□ -0.07
TMEM53-206ENST00000420706 RAB11FIP4Q86YS3 637 aa14.61□□□□□ -0.07
TMEM53-206ENST00000420706 HSCBQ8IWL3 235 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms