RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 ADGRA1Q86SQ6 560 aa12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 FOXP4Q8IVH2 680 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 MAPKAPK5Q8IW41 473 aa12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 C12orf42Q96LP6 360 aa12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 NOL10Q9BSC4 688 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-202ENST00000420009 CNMDO75829 334 aa12.54□□□□□ -0.4
TNFAIP3-202ENST00000420009 CRACR2BQ8N4Y2 399 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP3-202ENST00000420009 TGFBRAP1Q8WUH2 860 aa12.54□□□□□ -0.4
TNFAIP3-202ENST00000420009 PAGR1Q9BTK6 254 aa12.54□□□□□ -0.4
TNFAIP3-202ENST00000420009 PALD1Q9ULE6 856 aa12.54□□□□□ -0.4
TNFAIP3-202ENST00000420009 LTBP2Q14767 1821 aa12.53□□□□□ -0.4
TNFAIP3-202ENST00000420009 PNMA6EA0A0J9YXQ4 647 aa12.53□□□□□ -0.4
TNFAIP3-202ENST00000420009 HOXC6P09630 235 aa12.53□□□□□ -0.4
TNFAIP3-202ENST00000420009 USP17L2Q6R6M4 530 aa12.53□□□□□ -0.4
TNFAIP3-202ENST00000420009 CCAR1Q8IX12 1150 aaKnown RBP12.53□□□□□ -0.4
TNFAIP3-202ENST00000420009 ARHGAP45Q92619 1136 aa12.53□□□□□ -0.4
TNFAIP3-202ENST00000420009 FLRT1Q9NZU1 646 aa12.53□□□□□ -0.4
TNFAIP3-202ENST00000420009 RABGAP1Q9Y3P9 1069 aa12.53□□□□□ -0.4
TNFAIP3-202ENST00000420009 MSCO60682 206 aa12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 IGSF3O75054 1194 aa12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 GH2P01242 217 aa12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 IGHA2P01877 340 aa12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 RARSP54136 660 aaKnown RBP12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 LBX2Q6XYB7 198 aa12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 LPAR1Q92633 364 aa12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 EDC3Q96F86 508 aaKnown RBP12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 LBHD1Q9BQE6 289 aaPredicted RBP12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 TRIM34Q9BYJ4 488 aa12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 SNRKQ9NRH2 765 aa12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 DDX20Q9UHI6 824 aaKnown RBP12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 SAP30BPQ9UHR5 308 aaKnown RBP12.52□□□□□ -0.41
TNFAIP3-202ENST00000420009 PRUNE2Q8WUY3 3088 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 ZNF236Q9UL36 1845 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 ZNF316A6NFI3 1004 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 SLC15A5A6NIM6 579 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 USP17L15C9J2P7 530 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 USP17L13C9JLJ4 530 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 USP17L11C9JVI0 530 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 USP17L18D6R9N7 530 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 USP17L22D6RA61 530 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 USP17L17D6RBQ6 530 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 USP17L19D6RCP7 530 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 USP17L20D6RJB6 530 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 DNM1LO00429 736 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 GLRX3O76003 335 aaKnown RBP12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 CYP2E1P05181 493 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 HLA-DOAP06340 250 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 PTPREP23469 700 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 CCNA1P78396 465 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 USP17L24Q0WX57 530 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 GRB14Q14449 540 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 MFSD14CQ5VZR4 134 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 TATDN1Q6P1N9 297 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 ATF7IPQ6VMQ6 1270 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 DBNDD2Q9BQY9 259 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 SENP6Q9GZR1 1112 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 GPR108Q9NPR9 543 aa12.51□□□□□ -0.41
TNFAIP3-202ENST00000420009 MUC3AQ02505 3323 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 GNAI2P04899 355 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 VCAM1P19320 739 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 G3BP1Q13283 466 aaKnown RBP eCLIP12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 ZYXQ15942 572 aaKnown RBP12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 TNNI3KQ59H18 835 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 TTC39AQ5SRH9 613 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 CATSPERGQ6ZRH7 1159 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 TRPV1Q8NER1 839 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 MS4A3Q96HJ5 214 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 ZNF512BQ96KM6 892 aaPredicted RBP12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 FEZ1Q99689 392 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 KIAA1683Q9H0B3 1180 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 EHD4Q9H223 541 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 PIH1D3Q9NQM4 214 aaKnown RBP12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 NDUFB9Q9Y6M9 179 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 FPGT-TNNI3KV9GXZ4 949 aa12.5□□□□□ -0.41
TNFAIP3-202ENST00000420009 SPDYE16A6NNV3 312 aaPredicted RBP12.49□□□□□ -0.41
TNFAIP3-202ENST00000420009 CYBAP13498 195 aa12.49□□□□□ -0.41
TNFAIP3-202ENST00000420009 ATN1P54259 1190 aaPredicted RBP12.49□□□□□ -0.41
TNFAIP3-202ENST00000420009 USP14P54578 494 aa12.49□□□□□ -0.41
TNFAIP3-202ENST00000420009 RTP1P59025 263 aa12.49□□□□□ -0.41
TNFAIP3-202ENST00000420009 DYNLL1P63167 89 aaKnown RBP12.49□□□□□ -0.41
TNFAIP3-202ENST00000420009 ZNF697Q5TEC3 545 aa12.49□□□□□ -0.41
TNFAIP3-202ENST00000420009 NPLOC4Q8TAT6 608 aa12.49□□□□□ -0.41
TNFAIP3-202ENST00000420009 FAM161BQ96MY7 647 aa12.49□□□□□ -0.41
TNFAIP3-202ENST00000420009 BTBD7Q9P203 1132 aa12.49□□□□□ -0.41
TNFAIP3-202ENST00000420009 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
TNFAIP3-202ENST00000420009 A0A0G2JMZ2 1700 aa12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 ATMINO43313 823 aaPredicted RBP12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 TRIM27P14373 513 aa12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 CYP2C19P33261 490 aa12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 ZAP70P43403 619 aa12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 ATP2B2Q01814 1243 aa12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 SNX17Q15036 470 aa12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 CCDC158Q5M9N0 1113 aa12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 WDR78Q5VTH9 848 aa12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 ACER1Q8TDN7 264 aa12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 SERPINB13Q9UIV8 391 aa12.48□□□□□ -0.41
TNFAIP3-202ENST00000420009 IVNS1ABPQ9Y6Y0 642 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms