RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ACER1Q8TDN7 264 aa24.34■■□□□ 1.49
GTF3A-202ENST00000419181 TRIM47Q96LD4 638 aa24.34■■□□□ 1.49
GTF3A-202ENST00000419181 C12orf42Q96LP6 360 aa24.34■■□□□ 1.49
GTF3A-202ENST00000419181 FEZ1Q99689 392 aa24.34■■□□□ 1.49
GTF3A-202ENST00000419181 KIAA1683Q9H0B3 1180 aa24.34■■□□□ 1.49
GTF3A-202ENST00000419181 OSBPL3Q9H4L5 887 aa24.34■■□□□ 1.49
GTF3A-202ENST00000419181 ROBO3Q96MS0 1386 aa24.33■■□□□ 1.49
GTF3A-202ENST00000419181 OSBPP22059 807 aa24.33■■□□□ 1.49
GTF3A-202ENST00000419181 PSMC4P43686 418 aa24.33■■□□□ 1.49
GTF3A-202ENST00000419181 TMEM179Q6ZVK1 233 aa24.33■■□□□ 1.49
GTF3A-202ENST00000419181 CENPFP49454 3210 aa24.33■■□□□ 1.49
GTF3A-202ENST00000419181 PATL2C9JE40 543 aaKnown RBP24.32■■□□□ 1.48
GTF3A-202ENST00000419181 AKR1B1P15121 316 aa24.32■■□□□ 1.48
GTF3A-202ENST00000419181 GCLCP48506 637 aaPredicted RBP24.32■■□□□ 1.48
GTF3A-202ENST00000419181 TICAM2Q86XR7 235 aa24.32■■□□□ 1.48
GTF3A-202ENST00000419181 CCDC17Q96LX7 622 aa24.32■■□□□ 1.48
GTF3A-202ENST00000419181 ECM2O94769 699 aaPredicted RBP24.31■■□□□ 1.48
GTF3A-202ENST00000419181 APPP05067 770 aa24.31■■□□□ 1.48
GTF3A-202ENST00000419181 TDO2P48775 406 aa24.31■■□□□ 1.48
GTF3A-202ENST00000419181 USP14P54578 494 aa24.31■■□□□ 1.48
GTF3A-202ENST00000419181 IRX3P78415 501 aaPredicted RBP24.31■■□□□ 1.48
GTF3A-202ENST00000419181 ZYXQ15942 572 aaKnown RBP24.31■■□□□ 1.48
GTF3A-202ENST00000419181 FAM110CQ1W6H9 321 aa24.31■■□□□ 1.48
GTF3A-202ENST00000419181 IFNL3Q8IZI9 196 aa24.31■■□□□ 1.48
GTF3A-202ENST00000419181 ANKRD13CQ8N6S4 541 aa24.31■■□□□ 1.48
GTF3A-202ENST00000419181 PTCH2Q9Y6C5 1203 aa24.31■■□□□ 1.48
GTF3A-202ENST00000419181 GREB1LQ9C091 1923 aaPredicted RBP24.3■■□□□ 1.48
GTF3A-202ENST00000419181 FMNL1O95466 1100 aaPredicted RBP24.3■■□□□ 1.48
GTF3A-202ENST00000419181 PRMT2P55345 433 aa24.3■■□□□ 1.48
GTF3A-202ENST00000419181 FCGRTP55899 365 aa24.3■■□□□ 1.48
GTF3A-202ENST00000419181 SRRDQ9UH36 339 aa24.3■■□□□ 1.48
GTF3A-202ENST00000419181 A0A1W2PRG0 241 aa24.29■■□□□ 1.48
GTF3A-202ENST00000419181 MINDY4BA8MYZ0 360 aa24.29■■□□□ 1.48
GTF3A-202ENST00000419181 VCAM1P19320 739 aa24.29■■□□□ 1.48
GTF3A-202ENST00000419181 CCDC129Q6ZRS4 1044 aa24.29■■□□□ 1.48
GTF3A-202ENST00000419181 ARMC5Q96C12 935 aa24.29■■□□□ 1.48
GTF3A-202ENST00000419181 P2RX7Q99572 595 aaKnown RBP24.29■■□□□ 1.48
GTF3A-202ENST00000419181 NACAP1Q9BZK3 213 aa24.29■■□□□ 1.48
GTF3A-202ENST00000419181 TRIM6-TRIM34B2RNG4 842 aa24.28■■□□□ 1.48
GTF3A-202ENST00000419181 FOXP2O15409 715 aa24.28■■□□□ 1.48
GTF3A-202ENST00000419181 HERVK_113P62684 666 aa24.28■■□□□ 1.48
GTF3A-202ENST00000419181 CLEC10AQ8IUN9 316 aa24.28■■□□□ 1.48
GTF3A-202ENST00000419181 HELLSQ9NRZ9 838 aa24.28■■□□□ 1.48
GTF3A-202ENST00000419181 HOXD10P28358 340 aa24.27■■□□□ 1.48
GTF3A-202ENST00000419181 ICA1Q05084 483 aa24.27■■□□□ 1.48
GTF3A-202ENST00000419181 SIAH1Q8IUQ4 282 aa24.27■■□□□ 1.48
GTF3A-202ENST00000419181 FAM227BQ96M60 508 aa24.27■■□□□ 1.48
GTF3A-202ENST00000419181 MORF4L1Q9UBU8 362 aa24.27■■□□□ 1.48
GTF3A-202ENST00000419181 A0A0D9SFI3 127 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 USP17L15C9J2P7 530 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 USP17L13C9JLJ4 530 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 USP17L11C9JVI0 530 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 USP17L18D6R9N7 530 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 USP17L22D6RA61 530 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 USP17L17D6RBQ6 530 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 USP17L19D6RCP7 530 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 USP17L20D6RJB6 530 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 RASA1P20936 1047 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 USP17L24Q0WX57 530 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 RILPL2Q969X0 211 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 NAPBQ9H115 298 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 MYPNQ86TC9 1320 aa24.26■■□□□ 1.47
GTF3A-202ENST00000419181 DOCK3Q8IZD9 2030 aa24.25■■□□□ 1.47
GTF3A-202ENST00000419181 SLC9C1Q4G0N8 1177 aa24.25■■□□□ 1.47
GTF3A-202ENST00000419181 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.25■■□□□ 1.47
GTF3A-202ENST00000419181 KANSL2Q9H9L4 492 aa24.25■■□□□ 1.47
GTF3A-202ENST00000419181 ARHGEF10LQ9HCE6 1279 aa24.25■■□□□ 1.47
GTF3A-202ENST00000419181 TMX2Q9Y320 296 aa24.25■■□□□ 1.47
GTF3A-202ENST00000419181 RBBP6Q7Z6E9 1792 aaKnown RBP24.24■■□□□ 1.47
GTF3A-202ENST00000419181 PDE4AP27815 886 aa24.24■■□□□ 1.47
GTF3A-202ENST00000419181 PRKCZQ05513 592 aa24.24■■□□□ 1.47
GTF3A-202ENST00000419181 NMIQ13287 307 aaPredicted RBP24.24■■□□□ 1.47
GTF3A-202ENST00000419181 MCMDC2Q4G0Z9 681 aa24.24■■□□□ 1.47
GTF3A-202ENST00000419181 POTEEQ6S8J3 1075 aa24.24■■□□□ 1.47
GTF3A-202ENST00000419181 CATSPERGQ6ZRH7 1159 aa24.24■■□□□ 1.47
GTF3A-202ENST00000419181 STK11IPQ8N1F8 1099 aa24.24■■□□□ 1.47
GTF3A-202ENST00000419181 GTF3C2Q8WUA4 911 aaPredicted RBP24.24■■□□□ 1.47
GTF3A-202ENST00000419181 ZNF333Q96JL9 665 aa24.24■■□□□ 1.47
GTF3A-202ENST00000419181 MKNK2Q9HBH9 465 aa24.24■■□□□ 1.47
GTF3A-202ENST00000419181 TXNRD2Q9NNW7 524 aa24.24■■□□□ 1.47
GTF3A-202ENST00000419181 TNPO2O14787 897 aaKnown RBP24.23■■□□□ 1.47
GTF3A-202ENST00000419181 VPS53Q5VIR6 699 aa24.23■■□□□ 1.47
GTF3A-202ENST00000419181 RPAP3Q9H6T3 665 aaPredicted RBP24.23■■□□□ 1.47
GTF3A-202ENST00000419181 SH2D4AQ9H788 454 aa24.23■■□□□ 1.47
GTF3A-202ENST00000419181 ZNF287Q9HBT7 754 aa24.23■■□□□ 1.47
GTF3A-202ENST00000419181 RBPJLQ9UBG7 517 aa24.23■■□□□ 1.47
GTF3A-202ENST00000419181 KIAA0100Q14667 2235 aaKnown RBP24.22■■□□□ 1.47
GTF3A-202ENST00000419181 EEF2P13639 858 aaKnown RBP24.22■■□□□ 1.47
GTF3A-202ENST00000419181 SDSP20132 328 aa24.22■■□□□ 1.47
GTF3A-202ENST00000419181 PPARAQ07869 468 aa24.22■■□□□ 1.47
GTF3A-202ENST00000419181 KIAA1755Q5JYT7 1200 aa24.22■■□□□ 1.47
GTF3A-202ENST00000419181 NBPF11Q86T75 865 aa24.22■■□□□ 1.47
GTF3A-202ENST00000419181 RAET1EQ8TD07 263 aa24.22■■□□□ 1.47
GTF3A-202ENST00000419181 LPAR1Q92633 364 aa24.22■■□□□ 1.47
GTF3A-202ENST00000419181 GABRQQ9UN88 632 aa24.22■■□□□ 1.47
GTF3A-202ENST00000419181 RLFQ13129 1914 aa24.22■■□□□ 1.47
GTF3A-202ENST00000419181 PEX10O60683 326 aa24.21■■□□□ 1.47
GTF3A-202ENST00000419181 PRDM1O75626 825 aa24.21■■□□□ 1.47
GTF3A-202ENST00000419181 LBX2Q6XYB7 198 aa24.21■■□□□ 1.47
GTF3A-202ENST00000419181 ZNF589Q86UQ0 364 aaPredicted RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms