RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZNRF3Q9ULT6 936 aa7.47□□□□□ -1.21
HMGB1P49-201ENST00000418882 MAPK8IP1Q9UQF2 711 aa7.47□□□□□ -1.21
HMGB1P49-201ENST00000418882 UBOX5O94941 541 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 ERCC5P28715 1186 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 ZNF165P49910 485 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 BNIP3Q12983 259 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 CCDC81Q6ZN84 652 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 SPRED2Q7Z698 418 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 NETO1Q8TDF5 533 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 RASGRP4Q8TDF6 673 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 ATG4CQ96DT6 458 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 Q96M66 194 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 MKNK2Q9HBH9 465 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 GTF2IRD1Q9UHL9 959 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 CEP131Q9UPN4 1083 aa7.46□□□□□ -1.22
HMGB1P49-201ENST00000418882 MEIS3P2A8K0S8 358 aa7.45□□□□□ -1.22
HMGB1P49-201ENST00000418882 CBX7O95931 251 aa7.45□□□□□ -1.22
HMGB1P49-201ENST00000418882 ZNF865P0CJ78 1059 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P49-201ENST00000418882 SFRP5Q5T4F7 317 aa7.45□□□□□ -1.22
HMGB1P49-201ENST00000418882 C22orf34Q6ZV56 151 aa7.45□□□□□ -1.22
HMGB1P49-201ENST00000418882 BCL7CQ8WUZ0 217 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P49-201ENST00000418882 TMEM40Q8WWA1 233 aa7.45□□□□□ -1.22
HMGB1P49-201ENST00000418882 CNNM2Q9H8M5 875 aa7.45□□□□□ -1.22
HMGB1P49-201ENST00000418882 BSDC1Q9NW68 430 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P49-201ENST00000418882 EFR3BQ9Y2G0 817 aa7.45□□□□□ -1.22
HMGB1P49-201ENST00000418882 CAPN6Q9Y6Q1 641 aa7.45□□□□□ -1.22
HMGB1P49-201ENST00000418882 E9PSI1 815 aa7.44□□□□□ -1.22
HMGB1P49-201ENST00000418882 LRRN2O75325 713 aa7.44□□□□□ -1.22
HMGB1P49-201ENST00000418882 ACRP10323 421 aa7.44□□□□□ -1.22
HMGB1P49-201ENST00000418882 SOX9P48436 509 aa7.44□□□□□ -1.22
HMGB1P49-201ENST00000418882 IFI16Q16666 785 aaKnown RBP7.44□□□□□ -1.22
HMGB1P49-201ENST00000418882 XP32Q5T750 250 aa7.44□□□□□ -1.22
HMGB1P49-201ENST00000418882 CDCP2Q5VXM1 449 aa7.44□□□□□ -1.22
HMGB1P49-201ENST00000418882 PHACTR4Q8IZ21 702 aa7.44□□□□□ -1.22
HMGB1P49-201ENST00000418882 CCSER2Q9H7U1 834 aa7.44□□□□□ -1.22
HMGB1P49-201ENST00000418882 RGS13O14921 159 aa7.43□□□□□ -1.22
HMGB1P49-201ENST00000418882 NME1P15531 152 aaKnown RBP7.43□□□□□ -1.22
HMGB1P49-201ENST00000418882 TNK2Q07912 1038 aa7.43□□□□□ -1.22
HMGB1P49-201ENST00000418882 RUFY4Q6ZNE9 571 aa7.43□□□□□ -1.22
HMGB1P49-201ENST00000418882 ARHGAP27Q6ZUM4 889 aa7.43□□□□□ -1.22
HMGB1P49-201ENST00000418882 NLRC3Q7RTR2 1065 aa7.43□□□□□ -1.22
HMGB1P49-201ENST00000418882 MFSD4AQ8N468 514 aa7.43□□□□□ -1.22
HMGB1P49-201ENST00000418882 VWCEQ96DN2 955 aa7.43□□□□□ -1.22
HMGB1P49-201ENST00000418882 CCDC74BQ96LY2 380 aa7.43□□□□□ -1.22
HMGB1P49-201ENST00000418882 ST14Q9Y5Y6 855 aa7.43□□□□□ -1.22
HMGB1P49-201ENST00000418882 GNAT3A8MTJ3 354 aa7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 WASH4PA8MWX3 477 aa7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 VSIG10LQ86VR7 867 aa7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 LSRQ86X29 649 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 HSPA12BQ96MM6 686 aa7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 KREMEN1Q96MU8 473 aa7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 FERD3LQ96RJ6 166 aa7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 SLC9A7Q96T83 725 aa7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 TINF2Q9BSI4 451 aa7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 PAK6Q9NQU5 681 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 SEMA3GQ9NS98 782 aa7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 INPP5FQ9Y2H2 1132 aa7.42□□□□□ -1.22
HMGB1P49-201ENST00000418882 FAM86C2PA6NEL3 165 aa7.41□□□□□ -1.22
HMGB1P49-201ENST00000418882 TNFRSF10CO14798 259 aa7.41□□□□□ -1.22
HMGB1P49-201ENST00000418882 CD8BP10966 210 aa7.41□□□□□ -1.22
HMGB1P49-201ENST00000418882 RAG1P15918 1043 aa7.41□□□□□ -1.22
HMGB1P49-201ENST00000418882 ETV3P41162 512 aa7.41□□□□□ -1.22
HMGB1P49-201ENST00000418882 NASPP49321 788 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P49-201ENST00000418882 CDKAL1Q5VV42 579 aa7.41□□□□□ -1.22
HMGB1P49-201ENST00000418882 TMEM192Q8IY95 271 aa7.41□□□□□ -1.22
HMGB1P49-201ENST00000418882 OAS3Q9Y6K5 1087 aaKnown RBP7.41□□□□□ -1.22
HMGB1P49-201ENST00000418882 PITPNM2Q9BZ72 1349 aa7.41□□□□□ -1.22
HMGB1P49-201ENST00000418882 WNT11O96014 354 aa7.4□□□□□ -1.22
HMGB1P49-201ENST00000418882 GP2P55259 537 aaKnown RBP7.4□□□□□ -1.22
HMGB1P49-201ENST00000418882 PRKCQQ04759 706 aa7.4□□□□□ -1.22
HMGB1P49-201ENST00000418882 MLECQ14165 292 aa7.4□□□□□ -1.22
HMGB1P49-201ENST00000418882 ZYXQ15942 572 aaKnown RBP7.4□□□□□ -1.22
HMGB1P49-201ENST00000418882 AOC3Q16853 763 aa7.4□□□□□ -1.22
HMGB1P49-201ENST00000418882 FBXW10Q5XX13 1052 aa7.4□□□□□ -1.22
HMGB1P49-201ENST00000418882 ZNF746Q6NUN9 644 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P49-201ENST00000418882 DTWD2Q8NBA8 298 aa7.4□□□□□ -1.22
HMGB1P49-201ENST00000418882 FLCNQ8NFG4 579 aa7.4□□□□□ -1.22
HMGB1P49-201ENST00000418882 RNF141Q8WVD5 230 aa7.4□□□□□ -1.22
HMGB1P49-201ENST00000418882 TMEM265A0A087WTH1 108 aa7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 H3BS24 57 aa7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 GBP1P32455 592 aa7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 ABI1Q8IZP0 508 aa7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 RBBP8NLQ8NC74 664 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 SHDQ96IW2 340 aa7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 ZNF512BQ96KM6 892 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 HRASLS5Q96KN8 279 aa7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 CAPN10Q9HC96 672 aa7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 ATP13A1Q9HD20 1204 aa7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 VAV3Q9UKW4 847 aa7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 SLC5A6Q9Y289 635 aa7.39□□□□□ -1.23
HMGB1P49-201ENST00000418882 FAM155AB1AL88 458 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P49-201ENST00000418882 ATF4P18848 351 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P49-201ENST00000418882 CYP7A1P22680 504 aa7.38□□□□□ -1.23
HMGB1P49-201ENST00000418882 KIR3DL1P43629 444 aa7.38□□□□□ -1.23
HMGB1P49-201ENST00000418882 CLCN7P51798 805 aa7.38□□□□□ -1.23
HMGB1P49-201ENST00000418882 COL9A2Q14055 689 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P49-201ENST00000418882 LRRFIP1Q32MZ4 808 aaKnown RBP7.38□□□□□ -1.23
HMGB1P49-201ENST00000418882 FAM169BQ8N8A8 192 aa7.38□□□□□ -1.23
HMGB1P49-201ENST00000418882 DUSP15Q9H1R2 295 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P49-201ENST00000418882 ANGEL1Q9UNK9 670 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms