RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 GABPAQ06546 454 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 GRM4Q14833 912 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 NPY5RQ15761 445 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 MSL1Q68DK7 614 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 MAPKAPK5Q8IW41 473 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 NEDD1Q8NHV4 660 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 CTCFLQ8NI51 663 aaPredicted RBP10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 FAM200AQ8TCP9 573 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 TNFRSF25Q93038 417 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 CNKSR1Q969H4 720 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 DYNLL2Q96FJ2 89 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 TMX4Q9H1E5 349 aaPredicted RBP10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 MRVI1Q9Y6F6 885 aa10.46□□□□□ -0.73
LINCMD1-201ENST00000418518 COL2A1P02458 1487 aaPredicted RBP10.46□□□□□ -0.74
LINCMD1-201ENST00000418518 FER1L6Q2WGJ9 1857 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 RIMBP2O15034 1052 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 KINO60870 393 aaKnown RBP10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 CUTAO60888 179 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 WDHD1O75717 1129 aaPredicted RBP10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 CDK8P49336 464 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 GNAQP50148 359 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 TOB1P50616 345 aaPredicted RBP10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 TFAP4Q01664 338 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 AKAP17AQ02040 695 aaKnown RBP10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 SF3A1Q15459 793 aaKnown RBP10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 GRIPAP1Q4V328 841 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 RILPL1Q5EBL4 403 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 OLFM4Q6UX06 510 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 SRBD1Q8N5C6 995 aaKnown RBP10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 RNF214Q8ND24 703 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 TIGD1Q96MW7 591 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 HPSEQ9Y251 543 aa10.45□□□□□ -0.74
LINCMD1-201ENST00000418518 IGKV6D-41A0A0C4DH26 115 aa10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 BTBD18B2RXH4 712 aa10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 NPM3O75607 178 aaKnown RBP10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 EN1Q05925 392 aaPredicted RBP10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 GNL2Q13823 731 aaKnown RBP10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 PFKFB3Q16875 520 aaPredicted RBP10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 STRIP1Q5VSL9 837 aa10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 RESP18Q5W5W9 173 aa10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 ELOA2Q8IYF1 753 aaPredicted RBP10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 ZNF444Q8N0Y2 327 aaPredicted RBP10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 SLC44A5Q8NCS7 719 aa10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 PNMA1Q8ND90 353 aa10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 ZNF622Q969S3 477 aaKnown RBP eCLIP10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 KAT14Q9H8E8 782 aa10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 MKNK2Q9HBH9 465 aa10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 SH3GLB2Q9NR46 395 aa10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 KCNJ14Q9UNX9 436 aa10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 TTF2Q9UNY4 1162 aaKnown RBP10.44□□□□□ -0.74
LINCMD1-201ENST00000418518 PALM3A6NDB9 673 aaPredicted RBP10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 BMP15O95972 392 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 TSPY3P0CV98 308 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 TSPY8P0CW00 308 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 SCG2P13521 617 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 PTPREP23469 700 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 SMARCA1P28370 1054 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 KRT2P35908 639 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 NDUFA8P51970 172 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 KIAA2012Q0VF49 1180 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 CAMK4Q16566 473 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 STX1AQ16623 288 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 DACT2Q5SW24 774 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 APOBEC3HQ6NTF7 200 aaKnown RBP10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 CKAP2LQ8IYA6 745 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 CMTR1Q8N1G2 835 aaKnown RBP10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 OXER1Q8TDS5 423 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 SLC16A10Q8TF71 515 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 TEKT1Q969V4 418 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 ZDHHC15Q96MV8 337 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 LZTS2Q9BRK4 669 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 SPZ1Q9BXG8 430 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 EHD4Q9H223 541 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 SWAP70Q9UH65 585 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 SAP30BPQ9UHR5 308 aaKnown RBP10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 MAD2L2Q9UI95 211 aa10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 V9GY48 417 aaPredicted RBP10.43□□□□□ -0.74
LINCMD1-201ENST00000418518 USP17L3A6NCW0 530 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 USP17L4A6NCW7 530 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 TOP1P11387 765 aaKnown RBP10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 PFKFB1P16118 471 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 BAG6P46379 1132 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 TRAPPC10P48553 1259 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 NR5A1Q13285 461 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 DOK7Q18PE1 504 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 SLC35G1Q2M3R5 365 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 TPRNQ4KMQ1 711 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 SHC4Q6S5L8 630 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 SASS6Q6UVJ0 657 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 USP17L1Q7RTZ2 530 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 KRI1Q8N9T8 703 aaKnown RBP10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 ZNF579Q8NAF0 562 aaKnown RBP10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 DAGLBQ8NCG7 672 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 SUPT20HQ8NEM7 779 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 TRIM44Q96DX7 344 aaPredicted RBP10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 TMEM47Q9BQJ4 181 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 OSBPL5Q9H0X9 879 aaPredicted RBP10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 CBX8Q9HC52 389 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 BRMS1Q9HCU9 246 aa10.42□□□□□ -0.74
LINCMD1-201ENST00000418518 DDX4Q9NQI0 724 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms