RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ZBTB47Q9UFB7 747 aaPredicted RBP24.74■■□□□ 1.55
PKNOX1-202ENST00000418336 GNAT2P19087 354 aa24.73■■□□□ 1.55
PKNOX1-202ENST00000418336 LRRFIP1Q32MZ4 808 aaKnown RBP24.73■■□□□ 1.55
PKNOX1-202ENST00000418336 USP17L2Q6R6M4 530 aa24.73■■□□□ 1.55
PKNOX1-202ENST00000418336 CCDC129Q6ZRS4 1044 aa24.73■■□□□ 1.55
PKNOX1-202ENST00000418336 IFNL3Q8IZI9 196 aa24.73■■□□□ 1.55
PKNOX1-202ENST00000418336 PTCH2Q9Y6C5 1203 aa24.73■■□□□ 1.55
PKNOX1-202ENST00000418336 PSMC4P43686 418 aa24.72■■□□□ 1.55
PKNOX1-202ENST00000418336 KIAA1755Q5JYT7 1200 aa24.72■■□□□ 1.55
PKNOX1-202ENST00000418336 TMEM179Q6ZVK1 233 aa24.72■■□□□ 1.55
PKNOX1-202ENST00000418336 TICAM2Q86XR7 235 aa24.72■■□□□ 1.55
PKNOX1-202ENST00000418336 CLEC10AQ8IUN9 316 aa24.72■■□□□ 1.55
PKNOX1-202ENST00000418336 P2RX7Q99572 595 aaKnown RBP24.72■■□□□ 1.55
PKNOX1-202ENST00000418336 CABP5Q9NP86 173 aa24.72■■□□□ 1.55
PKNOX1-202ENST00000418336 PNMA3Q9UL41 463 aa24.72■■□□□ 1.55
PKNOX1-202ENST00000418336 RLFQ13129 1914 aa24.71■■□□□ 1.55
PKNOX1-202ENST00000418336 GNRH1P01148 92 aa24.71■■□□□ 1.55
PKNOX1-202ENST00000418336 OSBPP22059 807 aa24.71■■□□□ 1.55
PKNOX1-202ENST00000418336 FAM110CQ1W6H9 321 aa24.71■■□□□ 1.55
PKNOX1-202ENST00000418336 ARMC5Q96C12 935 aa24.71■■□□□ 1.55
PKNOX1-202ENST00000418336 FAM227BQ96M60 508 aa24.71■■□□□ 1.55
PKNOX1-202ENST00000418336 TXNRD2Q9NNW7 524 aa24.71■■□□□ 1.55
PKNOX1-202ENST00000418336 TMOD4Q9NZQ9 345 aa24.71■■□□□ 1.55
PKNOX1-202ENST00000418336 A0A0D9SFI3 127 aa24.7■■□□□ 1.54
PKNOX1-202ENST00000418336 PEX10O60683 326 aa24.7■■□□□ 1.54
PKNOX1-202ENST00000418336 RASA1P20936 1047 aa24.7■■□□□ 1.54
PKNOX1-202ENST00000418336 PABPC4Q13310 644 aaKnown RBP eCLIP24.7■■□□□ 1.54
PKNOX1-202ENST00000418336 VPS53Q5VIR6 699 aa24.7■■□□□ 1.54
PKNOX1-202ENST00000418336 ANKRD13CQ8N6S4 541 aa24.7■■□□□ 1.54
PKNOX1-202ENST00000418336 SMCR8Q8TEV9 937 aaPredicted RBP24.7■■□□□ 1.54
PKNOX1-202ENST00000418336 MORF4L1Q9UBU8 362 aa24.7■■□□□ 1.54
PKNOX1-202ENST00000418336 SRRDQ9UH36 339 aa24.7■■□□□ 1.54
PKNOX1-202ENST00000418336 VCAM1P19320 739 aa24.69■■□□□ 1.54
PKNOX1-202ENST00000418336 ZYXQ15942 572 aaKnown RBP24.69■■□□□ 1.54
PKNOX1-202ENST00000418336 DDRGK1Q96HY6 314 aa24.69■■□□□ 1.54
PKNOX1-202ENST00000418336 CCDC17Q96LX7 622 aa24.69■■□□□ 1.54
PKNOX1-202ENST00000418336 TACC3Q9Y6A5 838 aa24.69■■□□□ 1.54
PKNOX1-202ENST00000418336 DOCK3Q8IZD9 2030 aa24.69■■□□□ 1.54
PKNOX1-202ENST00000418336 PLXNB2O15031 1838 aa24.68■■□□□ 1.54
PKNOX1-202ENST00000418336 RBBP6Q7Z6E9 1792 aaKnown RBP24.68■■□□□ 1.54
PKNOX1-202ENST00000418336 ECM2O94769 699 aaPredicted RBP24.68■■□□□ 1.54
PKNOX1-202ENST00000418336 GCLCP48506 637 aaPredicted RBP24.68■■□□□ 1.54
PKNOX1-202ENST00000418336 USP14P54578 494 aa24.68■■□□□ 1.54
PKNOX1-202ENST00000418336 HERVK_113P62684 666 aa24.68■■□□□ 1.54
PKNOX1-202ENST00000418336 HELLSQ9NRZ9 838 aa24.68■■□□□ 1.54
PKNOX1-202ENST00000418336 RBPJLQ9UBG7 517 aa24.68■■□□□ 1.54
PKNOX1-202ENST00000418336 MPHOSPH10O00566 681 aaKnown RBP24.67■■□□□ 1.54
PKNOX1-202ENST00000418336 CNMDO75829 334 aa24.67■■□□□ 1.54
PKNOX1-202ENST00000418336 SOX10P56693 466 aa24.67■■□□□ 1.54
PKNOX1-202ENST00000418336 KIF22Q14807 665 aa24.67■■□□□ 1.54
PKNOX1-202ENST00000418336 CATSPERGQ6ZRH7 1159 aa24.67■■□□□ 1.54
PKNOX1-202ENST00000418336 ZNF589Q86UQ0 364 aaPredicted RBP24.67■■□□□ 1.54
PKNOX1-202ENST00000418336 GABRQQ9UN88 632 aa24.67■■□□□ 1.54
PKNOX1-202ENST00000418336 TMX2Q9Y320 296 aa24.67■■□□□ 1.54
PKNOX1-202ENST00000418336 MKI67P46013 3256 aaKnown RBP24.66■■□□□ 1.54
PKNOX1-202ENST00000418336 IGKV6D-41A0A0C4DH26 115 aa24.66■■□□□ 1.54
PKNOX1-202ENST00000418336 PRMT2P55345 433 aa24.66■■□□□ 1.54
PKNOX1-202ENST00000418336 NMIQ13287 307 aaPredicted RBP24.66■■□□□ 1.54
PKNOX1-202ENST00000418336 ARHGEF6Q15052 776 aa24.66■■□□□ 1.54
PKNOX1-202ENST00000418336 AMOTL1Q8IY63 956 aa24.66■■□□□ 1.54
PKNOX1-202ENST00000418336 ZNF333Q96JL9 665 aa24.66■■□□□ 1.54
PKNOX1-202ENST00000418336 A0A0G2JMZ2 1700 aa24.66■■□□□ 1.54
PKNOX1-202ENST00000418336 PARP14Q460N5 1801 aa24.65■■□□□ 1.54
PKNOX1-202ENST00000418336 MINDY4BA8MYZ0 360 aa24.65■■□□□ 1.54
PKNOX1-202ENST00000418336 TDO2P48775 406 aa24.65■■□□□ 1.54
PKNOX1-202ENST00000418336 FCGRTP55899 365 aa24.65■■□□□ 1.54
PKNOX1-202ENST00000418336 ICA1Q05084 483 aa24.65■■□□□ 1.54
PKNOX1-202ENST00000418336 PRKCZQ05513 592 aa24.65■■□□□ 1.54
PKNOX1-202ENST00000418336 Q3C1V9 767 aa24.65■■□□□ 1.54
PKNOX1-202ENST00000418336 USP17L15C9J2P7 530 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 USP17L13C9JLJ4 530 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 USP17L11C9JVI0 530 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 USP17L18D6R9N7 530 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 USP17L22D6RA61 530 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 USP17L17D6RBQ6 530 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 USP17L19D6RCP7 530 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 USP17L20D6RJB6 530 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 FMNL1O95466 1100 aaPredicted RBP24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 GSPT1P15170 499 aaKnown RBP24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 SDSP20132 328 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 IRX3P78415 501 aaPredicted RBP24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 USP17L24Q0WX57 530 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 LBX2Q6XYB7 198 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 FEZ1Q99689 392 aa24.64■■□□□ 1.54
PKNOX1-202ENST00000418336 APPP05067 770 aa24.63■■□□□ 1.53
PKNOX1-202ENST00000418336 PPARAQ07869 468 aa24.63■■□□□ 1.53
PKNOX1-202ENST00000418336 ALX1Q15699 326 aa24.63■■□□□ 1.53
PKNOX1-202ENST00000418336 MCMDC2Q4G0Z9 681 aa24.63■■□□□ 1.53
PKNOX1-202ENST00000418336 STK11IPQ8N1F8 1099 aa24.63■■□□□ 1.53
PKNOX1-202ENST00000418336 RPAP3Q9H6T3 665 aaPredicted RBP24.63■■□□□ 1.53
PKNOX1-202ENST00000418336 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.63■■□□□ 1.533e-8■■■■■ 40.8
PKNOX1-202ENST00000418336 PLIN4Q96Q06 1357 aa24.63■■□□□ 1.53
PKNOX1-202ENST00000418336 TNRC18O15417 2968 aaPredicted RBP24.63■■□□□ 1.53
PKNOX1-202ENST00000418336 MYPNQ86TC9 1320 aa24.62■■□□□ 1.53
PKNOX1-202ENST00000418336 TRIM6-TRIM34B2RNG4 842 aa24.62■■□□□ 1.53
PKNOX1-202ENST00000418336 PRDM1O75626 825 aa24.62■■□□□ 1.53
PKNOX1-202ENST00000418336 EEF2P13639 858 aaKnown RBP24.62■■□□□ 1.53
PKNOX1-202ENST00000418336 SH3TC2Q8TF17 1288 aa24.62■■□□□ 1.53
PKNOX1-202ENST00000418336 RILPL2Q969X0 211 aa24.62■■□□□ 1.53
PKNOX1-202ENST00000418336 KANSL2Q9H9L4 492 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms