RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 KCNQ2O43526 872 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 RBL2Q08999 1139 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 MORC3Q14149 939 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 ZSCAN10Q96SZ4 725 aaPredicted RBP13.54□□□□□ -0.24
LIMK1-202ENST00000418310 ZCCHC17Q9NP64 241 aaKnown RBP13.54□□□□□ -0.24
LIMK1-202ENST00000418310 RNF216Q9NWF9 866 aaPredicted RBP13.54□□□□□ -0.24
LIMK1-202ENST00000418310 SYNRGQ9UMZ2 1314 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 ATRNO75882 1429 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 SLFN14P0C7P3 912 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 XBP1P17861 261 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 PTGDRQ13258 359 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 ERFEQ4G0M1 354 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 INTS5Q6P9B9 1019 aaKnown RBP13.54□□□□□ -0.24
LIMK1-202ENST00000418310 PPFIBP1Q86W92 1011 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 MLKLQ8NB16 471 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 GPKOWQ92917 476 aaPredicted RBP eCLIP13.54□□□□□ -0.24
LIMK1-202ENST00000418310 STK36Q9NRP7 1315 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 EIF5P55010 431 aaKnown RBP13.54□□□□□ -0.24
LIMK1-202ENST00000418310 NLRP5P59047 1200 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 PPP2R3AQ06190 1150 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 DPYDQ12882 1025 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 PKN1Q16512 942 aa13.54□□□□□ -0.24
LIMK1-202ENST00000418310 BCL9O00512 1426 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 PNMA6AP0CW24 399 aaPredicted RBP13.53□□□□□ -0.24
LIMK1-202ENST00000418310 SIK1P57059 783 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 IQCA1Q86XH1 822 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 PAGE5Q96GU1 130 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 DACH1Q9UI36 760 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 CEP131Q9UPN4 1083 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 CCP110O43303 1012 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 ABL1P00519 1130 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 GNAT2P19087 354 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 CASP14P31944 242 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 PLCD1P51178 756 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 GYS2P54840 703 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 RRAGBQ5VZM2 374 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 TAB2Q9NYJ8 693 aa13.53□□□□□ -0.24
LIMK1-202ENST00000418310 ERVV-1B6SEH8 477 aa13.52□□□□□ -0.24
LIMK1-202ENST00000418310 TERF2Q15554 542 aa13.52□□□□□ -0.24
LIMK1-202ENST00000418310 RAD9BQ6WBX8 426 aa13.52□□□□□ -0.24
LIMK1-202ENST00000418310 ANKRD18AQ8IVF6 992 aa13.52□□□□□ -0.24
LIMK1-202ENST00000418310 ENOX1Q8TC92 643 aaKnown RBP13.52□□□□□ -0.24
LIMK1-202ENST00000418310 CELF1Q92879 486 aaKnown RBP13.52□□□□□ -0.24
LIMK1-202ENST00000418310 SLIT2O94813 1529 aa13.52□□□□□ -0.24
LIMK1-202ENST00000418310 AKR1B15C9JRZ8 316 aaPredicted RBP13.52□□□□□ -0.25
LIMK1-202ENST00000418310 TADA3O75528 432 aa13.52□□□□□ -0.25
LIMK1-202ENST00000418310 H2AFXP16104 143 aaPredicted RBP13.52□□□□□ -0.25
LIMK1-202ENST00000418310 ZNF18P17022 549 aa13.52□□□□□ -0.25
LIMK1-202ENST00000418310 PRDX5P30044 214 aa13.52□□□□□ -0.25
LIMK1-202ENST00000418310 BMS1Q14692 1282 aaKnown RBP13.52□□□□□ -0.25
LIMK1-202ENST00000418310 TTC38Q5R3I4 469 aa13.52□□□□□ -0.25
LIMK1-202ENST00000418310 FHOD1Q9Y613 1164 aa13.52□□□□□ -0.25
LIMK1-202ENST00000418310 PHLPP2Q6ZVD8 1323 aa13.52□□□□□ -0.25
LIMK1-202ENST00000418310 CAMTA2O94983 1202 aa13.52□□□□□ -0.25
LIMK1-202ENST00000418310 SEC23AQ15436 765 aa13.52□□□□□ -0.25
LIMK1-202ENST00000418310 CPVLQ9H3G5 476 aa13.52□□□□□ -0.25
LIMK1-202ENST00000418310 ARGLU1Q9NWB6 273 aaPredicted RBP13.52□□□□□ -0.25
LIMK1-202ENST00000418310 FAM237AA0A1B0GTK4 181 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 TSPY2A6NKD2 308 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 PP2D1A8MPX8 630 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 NTSR2O95665 410 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 DHX8Q14562 1220 aaKnown RBP13.51□□□□□ -0.25
LIMK1-202ENST00000418310 DDB1Q16531 1140 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 CAVIN4Q5BKX8 364 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 TMTC2Q8N394 836 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 NOL10Q9BSC4 688 aaKnown RBP13.51□□□□□ -0.25
LIMK1-202ENST00000418310 N4BP3O15049 544 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 CUL4BQ13620 913 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 ZNF569Q5MCW4 686 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 SRBD1Q8N5C6 995 aaKnown RBP13.51□□□□□ -0.25
LIMK1-202ENST00000418310 CTCFLQ8NI51 663 aaPredicted RBP13.51□□□□□ -0.25
LIMK1-202ENST00000418310 BRMS1Q9HCU9 246 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 GDAQ9Y2T3 454 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 SARSP49591 514 aaKnown RBP13.51□□□□□ -0.25
LIMK1-202ENST00000418310 FXR1P51114 621 aaKnown RBP eCLIP13.51□□□□□ -0.25
LIMK1-202ENST00000418310 RASGRP2Q7LDG7 609 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 ZNF384Q8TF68 577 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 CDC5LQ99459 802 aaKnown RBP13.51□□□□□ -0.25
LIMK1-202ENST00000418310 RNF26Q9BY78 433 aaPredicted RBP13.51□□□□□ -0.25
LIMK1-202ENST00000418310 GNL3LQ9NVN8 582 aaKnown RBP13.51□□□□□ -0.25
LIMK1-202ENST00000418310 TFR2Q9UP52 801 aa13.51□□□□□ -0.25
LIMK1-202ENST00000418310 TBX2Q13207 712 aaPredicted RBP13.5□□□□□ -0.25
LIMK1-202ENST00000418310 KCND1Q9NSA2 647 aa13.5□□□□□ -0.25
LIMK1-202ENST00000418310 PNPLA7Q6ZV29 1317 aa13.5□□□□□ -0.25
LIMK1-202ENST00000418310 STX10O60499 249 aa13.5□□□□□ -0.25
LIMK1-202ENST00000418310 PLA2G4AP47712 749 aa13.5□□□□□ -0.25
LIMK1-202ENST00000418310 CTR9Q6PD62 1173 aa13.5□□□□□ -0.25
LIMK1-202ENST00000418310 NUP88Q99567 741 aaPredicted RBP13.5□□□□□ -0.25
LIMK1-202ENST00000418310 RIOK1Q9BRS2 568 aaKnown RBP13.5□□□□□ -0.25
LIMK1-202ENST00000418310 TRIM49BA6NDI0 452 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 CCDC175P0C221 793 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 ERCC3P19447 782 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 GABPB1Q06547 395 aaPredicted RBP13.49□□□□□ -0.25
LIMK1-202ENST00000418310 NR1I3Q14994 352 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 KIF4BQ2VIQ3 1234 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 DYNLL2Q96FJ2 89 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 GPR101Q96P66 508 aaPredicted RBP13.49□□□□□ -0.25
LIMK1-202ENST00000418310 PHF20Q9BVI0 1012 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms