RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 PASKQ96RG2 1323 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 CCDC69A6NI79 296 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 ZNF157P51786 506 aaPredicted RBP9.95□□□□□ -0.82
TRIM48-201ENST00000417545 MAP3K10Q02779 954 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 WTAPQ15007 396 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 SEPT2Q15019 361 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 MAP3K11Q16584 847 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 TSGA10IPQ3SY00 556 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 TMEM67Q5HYA8 995 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 NOL9Q5SY16 702 aaKnown RBP9.95□□□□□ -0.82
TRIM48-201ENST00000417545 IFIT1BQ5T764 474 aaKnown RBP9.95□□□□□ -0.82
TRIM48-201ENST00000417545 SYNE3Q6ZMZ3 975 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 STOX1Q6ZVD7 989 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 CHST3Q7LGC8 479 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 RASEFQ8IZ41 740 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 NEDD1Q8NHV4 660 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 KAT14Q9H8E8 782 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 KANSL2Q9H9L4 492 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 ZNF112Q9UJU3 913 aa9.95□□□□□ -0.82
TRIM48-201ENST00000417545 TNKSO95271 1327 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 UNCXA6NJT0 531 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 PHF20L1A8MW92 1017 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 ST18O60284 1047 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 TTLL1O95922 423 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 RBM25P49756 843 aaKnown RBP9.94□□□□□ -0.82
TRIM48-201ENST00000417545 APLP1P51693 650 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 RABEP1Q15276 862 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 ZYXQ15942 572 aaKnown RBP9.94□□□□□ -0.82
TRIM48-201ENST00000417545 ADCK5Q3MIX3 580 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 DHX32Q7L7V1 743 aaKnown RBP9.94□□□□□ -0.82
TRIM48-201ENST00000417545 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 TMEM87BQ96K49 555 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 TBC1D32Q96NH3 1257 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 ZSCAN10Q96SZ4 725 aaPredicted RBP9.94□□□□□ -0.82
TRIM48-201ENST00000417545 UPF3BQ9BZI7 483 aaKnown RBP9.94□□□□□ -0.82
TRIM48-201ENST00000417545 TM6SF1Q9BZW5 370 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 GOPCQ9HD26 462 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 PDRG1Q9NUG6 133 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 ZSWIM5Q9P217 1185 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 CLIP2Q9UDT6 1046 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 MTMR7Q9Y216 660 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 SNCAIPQ9Y6H5 919 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 TAF6LQ9Y6J9 622 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 ZHX2Q9Y6X8 837 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 PLIN4Q96Q06 1357 aa9.94□□□□□ -0.82
TRIM48-201ENST00000417545 FGRP09769 529 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 PTPRAP18433 802 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 RPS6KB1P23443 525 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 NEK4P51957 841 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 MKRN3Q13064 507 aaKnown RBP9.93□□□□□ -0.82
TRIM48-201ENST00000417545 CST9Q5W186 159 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 RGMBQ6NW40 437 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.93□□□□□ -0.82
TRIM48-201ENST00000417545 RUFY3Q7L099 469 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 CYB5R4Q7L1T6 521 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 ERO1BQ86YB8 467 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 MB21D2Q8IYB1 491 aaPredicted RBP9.93□□□□□ -0.82
TRIM48-201ENST00000417545 KCNB2Q92953 911 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 OPTNQ96CV9 577 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 CEP95Q96GE4 821 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 CLMNQ96JQ2 1002 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 TCEANC2Q96MN5 208 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 LRRC2Q9BYS8 371 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 TMOD4Q9NZQ9 345 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 TLL2Q9Y6L7 1015 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 WDR19Q8NEZ3 1342 aa9.93□□□□□ -0.82
TRIM48-201ENST00000417545 GREB1LQ9C091 1923 aaPredicted RBP9.93□□□□□ -0.82
TRIM48-201ENST00000417545 SPDYE5A6NIY4 337 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 TRIM75PA6NK02 468 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 USP17L10C9JJH3 530 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 NMT2O60551 498 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 EEF2P13639 858 aaKnown RBP9.92□□□□□ -0.82
TRIM48-201ENST00000417545 CPA1P15085 419 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 USP14P54578 494 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 PPATQ06203 517 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 IKQ13123 557 aaPredicted RBP9.92□□□□□ -0.82
TRIM48-201ENST00000417545 ANKRD1Q15327 319 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 GADL1Q6ZQY3 521 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 Q6ZUG5 572 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 NOL8Q76FK4 1167 aaKnown RBP9.92□□□□□ -0.82
TRIM48-201ENST00000417545 CATIPQ7Z7H3 387 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 CCDC84Q86UT8 332 aaPredicted RBP9.92□□□□□ -0.82
TRIM48-201ENST00000417545 CLEC10AQ8IUN9 316 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 LRRC47Q8N1G4 583 aaKnown RBP9.92□□□□□ -0.82
TRIM48-201ENST00000417545 TMTC2Q8N394 836 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 ZNF280CQ8ND82 737 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 TTC14Q96N46 770 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 CREBZFQ9NS37 354 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 TCP11L1Q9NUJ3 509 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 MTMR4Q9NYA4 1195 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.92□□□□□ -0.82
TRIM48-201ENST00000417545 TACC3Q9Y6A5 838 aa9.92□□□□□ -0.82
TRIM48-201ENST00000417545 TOP1P11387 765 aaKnown RBP9.91□□□□□ -0.82
TRIM48-201ENST00000417545 ECE1P42892 770 aa9.91□□□□□ -0.82
TRIM48-201ENST00000417545 SPP2Q13103 211 aa9.91□□□□□ -0.82
TRIM48-201ENST00000417545 PPIL2Q13356 520 aa9.91□□□□□ -0.82
TRIM48-201ENST00000417545 MTMR2Q13614 643 aa9.91□□□□□ -0.82
TRIM48-201ENST00000417545 RRP1BQ14684 758 aaKnown RBP9.91□□□□□ -0.82
TRIM48-201ENST00000417545 CCDC96Q2M329 555 aa9.91□□□□□ -0.82
TRIM48-201ENST00000417545 SHROOM1Q2M3G4 852 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms