RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 SLC3A2P08195 630 aaKnown RBP16.96■□□□□ 0.31
SLC13A3-205ENST00000417157 BCRP11274 1271 aa16.96■□□□□ 0.31
SLC13A3-205ENST00000417157 HOXD10P28358 340 aa16.96■□□□□ 0.31
SLC13A3-205ENST00000417157 HOXA7P31268 230 aaPredicted RBP16.96■□□□□ 0.31
SLC13A3-205ENST00000417157 IFNL3Q8IZI9 196 aa16.96■□□□□ 0.31
SLC13A3-205ENST00000417157 SLC44A5Q8NCS7 719 aa16.96■□□□□ 0.31
SLC13A3-205ENST00000417157 GTF3C2Q8WUA4 911 aaPredicted RBP16.96■□□□□ 0.31
SLC13A3-205ENST00000417157 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
SLC13A3-205ENST00000417157 ARHGEF10LQ9HCE6 1279 aa16.96■□□□□ 0.31
SLC13A3-205ENST00000417157 EPB41L4AQ9HCS5 686 aaPredicted RBP16.96■□□□□ 0.31
SLC13A3-205ENST00000417157 PTPN22Q9Y2R2 807 aa16.96■□□□□ 0.31
SLC13A3-205ENST00000417157 MINDY4BA8MYZ0 360 aa16.95■□□□□ 0.3
SLC13A3-205ENST00000417157 HIP1O00291 1037 aa16.95■□□□□ 0.3
SLC13A3-205ENST00000417157 MFAP1P55081 439 aaKnown RBP16.95■□□□□ 0.3
SLC13A3-205ENST00000417157 FCGRTP55899 365 aa16.95■□□□□ 0.3
SLC13A3-205ENST00000417157 EVX2Q03828 476 aa16.95■□□□□ 0.3
SLC13A3-205ENST00000417157 ICA1Q05084 483 aa16.95■□□□□ 0.3
SLC13A3-205ENST00000417157 SEPT2Q15019 361 aa16.95■□□□□ 0.3
SLC13A3-205ENST00000417157 FAM110CQ1W6H9 321 aa16.95■□□□□ 0.3
SLC13A3-205ENST00000417157 ASCC2Q9H1I8 757 aaPredicted RBP16.95■□□□□ 0.3
SLC13A3-205ENST00000417157 MKNK2Q9HBH9 465 aa16.95■□□□□ 0.3
SLC13A3-205ENST00000417157 GUCY1A2P33402 732 aa16.94■□□□□ 0.3
SLC13A3-205ENST00000417157 PSMC4P43686 418 aa16.94■□□□□ 0.3
SLC13A3-205ENST00000417157 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
SLC13A3-205ENST00000417157 EMILIN3Q9NT22 766 aa16.94■□□□□ 0.3
SLC13A3-205ENST00000417157 FMNL1O95466 1100 aaPredicted RBP16.93■□□□□ 0.3
SLC13A3-205ENST00000417157 AKR1B1P15121 316 aa16.93■□□□□ 0.3
SLC13A3-205ENST00000417157 PDE4BQ07343 736 aa16.93■□□□□ 0.3
SLC13A3-205ENST00000417157 ZYXQ15942 572 aaKnown RBP16.93■□□□□ 0.3
SLC13A3-205ENST00000417157 KANSL2Q9H9L4 492 aa16.93■□□□□ 0.3
SLC13A3-205ENST00000417157 DIAPH3Q9NSV4 1193 aa16.93■□□□□ 0.3
SLC13A3-205ENST00000417157 BAZ2AQ9UIF9 1905 aaKnown RBP16.93■□□□□ 0.3
SLC13A3-205ENST00000417157 USP17L15C9J2P7 530 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 USP17L13C9JLJ4 530 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 USP17L11C9JVI0 530 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 USP17L18D6R9N7 530 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 USP17L22D6RA61 530 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 USP17L17D6RBQ6 530 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 USP17L19D6RCP7 530 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 USP17L20D6RJB6 530 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 VCAM1P19320 739 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 USP17L24Q0WX57 530 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 ACER1Q8TDN7 264 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 LPAR1Q92633 364 aa16.92■□□□□ 0.3
SLC13A3-205ENST00000417157 A0A0D9SFI3 127 aa16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 SDSP20132 328 aa16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 HERVK_113P62684 666 aa16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 PPARAQ07869 468 aa16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 NMIQ13287 307 aaPredicted RBP16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 NBPF11Q86T75 865 aa16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 ZNF444Q8N0Y2 327 aaPredicted RBP16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 ARHGAP39Q9C0H5 1083 aa16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 ZMYM6O95789 1325 aa16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 CCDC171Q6TFL3 1326 aa16.91■□□□□ 0.3
SLC13A3-205ENST00000417157 MYH8P13535 1937 aa16.9■□□□□ 0.3
SLC13A3-205ENST00000417157 TNPO2O14787 897 aaKnown RBP16.9■□□□□ 0.3
SLC13A3-205ENST00000417157 RASA1P20936 1047 aa16.9■□□□□ 0.3
SLC13A3-205ENST00000417157 TRIM47Q96LD4 638 aa16.9■□□□□ 0.3
SLC13A3-205ENST00000417157 GOPCQ9HD26 462 aa16.9■□□□□ 0.3
SLC13A3-205ENST00000417157 MORF4L1Q9UBU8 362 aa16.9■□□□□ 0.3
SLC13A3-205ENST00000417157 SRRDQ9UH36 339 aa16.9■□□□□ 0.3
SLC13A3-205ENST00000417157 TMX2Q9Y320 296 aa16.9■□□□□ 0.3
SLC13A3-205ENST00000417157 MYPNQ86TC9 1320 aa16.9■□□□□ 0.3
SLC13A3-205ENST00000417157 SMIM22K7EJ46 135 aa16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 ALX1Q15699 326 aa16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 SLC9C1Q4G0N8 1177 aa16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 PPP4R3BQ5MIZ7 849 aa16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 TTC22Q5TAA0 569 aa16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 CATSPERGQ6ZRH7 1159 aa16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 GPRC5AQ8NFJ5 357 aa16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 RAET1EQ8TD07 263 aa16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 COA7Q96BR5 231 aa16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 P2RX7Q99572 595 aaKnown RBP16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 RPAP3Q9H6T3 665 aaPredicted RBP16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 PTCH2Q9Y6C5 1203 aa16.89■□□□□ 0.29
SLC13A3-205ENST00000417157 A0A1W2PRG0 241 aa16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 TSPY3P0CV98 308 aa16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 TSPY8P0CW00 308 aa16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 EEF2P13639 858 aaKnown RBP16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 PDE4AP27815 886 aa16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 CAP1Q01518 475 aa16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 ATP2B2Q01814 1243 aa16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 CENPQQ7L2Z9 268 aaPredicted RBP16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 CCAR1Q8IX12 1150 aaKnown RBP16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 STK11IPQ8N1F8 1099 aa16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 ARMC5Q96C12 935 aa16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 TANGO6Q9C0B7 1094 aa16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 VCPKMTQ9H867 229 aa16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 SYNPO2Q9UMS6 1093 aa16.88■□□□□ 0.29
SLC13A3-205ENST00000417157 WDR46O15213 610 aaKnown RBP16.87■□□□□ 0.29
SLC13A3-205ENST00000417157 ECM2O94769 699 aaPredicted RBP16.87■□□□□ 0.29
SLC13A3-205ENST00000417157 HSPD1P10809 573 aaKnown RBP16.87■□□□□ 0.29
SLC13A3-205ENST00000417157 CTGFP29279 349 aa16.87■□□□□ 0.29
SLC13A3-205ENST00000417157 CCNA1P78396 465 aa16.87■□□□□ 0.29
SLC13A3-205ENST00000417157 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
SLC13A3-205ENST00000417157 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
SLC13A3-205ENST00000417157 LBX2Q6XYB7 198 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms