RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 IMPACTQ9P2X3 320 aa13.43□□□□□ -0.26
PTPRF-205ENST00000414879 SLIT1O75093 1534 aa13.43□□□□□ -0.26
PTPRF-205ENST00000414879 GNA14O95837 355 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 IRX3P78415 501 aaPredicted RBP13.42□□□□□ -0.26
PTPRF-205ENST00000414879 PTH1RQ03431 593 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 ME3Q16798 604 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 MMRN2Q9H8L6 949 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 SETD1BQ9UPS6 1966 aaKnown RBP13.42□□□□□ -0.26
PTPRF-205ENST00000414879 CYP19A1P11511 503 aaPredicted RBP13.42□□□□□ -0.26
PTPRF-205ENST00000414879 PDE4DQ08499 809 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 CEP135Q66GS9 1140 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 BARGINQ6ZT62 677 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 WDR19Q8NEZ3 1342 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 RCAN1P53805 252 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 SNX16P57768 344 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 NLRP12P59046 1061 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 PUS3Q9BZE2 481 aaKnown RBP13.42□□□□□ -0.26
PTPRF-205ENST00000414879 CUEDC2Q9H467 287 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 A0A1B0GVL5 298 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 SMCO2A6NFE2 343 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 KIAA0754O94854 1291 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 UBXN1Q04323 297 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 CEP112Q8N8E3 955 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 PLA2G12BQ9BX93 195 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 BCS1LQ9Y276 419 aa13.42□□□□□ -0.26
PTPRF-205ENST00000414879 ICA1Q05084 483 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 SUPT20HL1Q3ZLR7 823 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 CCDC186Q7Z3E2 898 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 SNX29Q8TEQ0 813 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 BBXQ8WY36 941 aaPredicted RBP13.41□□□□□ -0.26
PTPRF-205ENST00000414879 KANSL2Q9H9L4 492 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 ZKSCAN5Q9Y2L8 839 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 CD163L1Q9NR16 1453 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 ZNF202O95125 648 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 LIFRP42702 1097 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 OTUD6AQ7L8S5 288 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 FCHSD1Q86WN1 690 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 KIFAP3Q92845 792 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 BRIP1Q9BX63 1249 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 SUSD4Q5VX71 490 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 CCDC91Q7Z6B0 441 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 CCDC84Q86UT8 332 aaPredicted RBP13.41□□□□□ -0.26
PTPRF-205ENST00000414879 FOXP4Q8IVH2 680 aaPredicted RBP13.41□□□□□ -0.26
PTPRF-205ENST00000414879 GJD4Q96KN9 370 aaPredicted RBP13.41□□□□□ -0.26
PTPRF-205ENST00000414879 TTC14Q96N46 770 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 AZI2Q9H6S1 392 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 H0YHG0 523 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 FOXP1Q9H334 677 aaPredicted RBP13.41□□□□□ -0.26
PTPRF-205ENST00000414879 RASAL2Q9UJF2 1139 aa13.41□□□□□ -0.26
PTPRF-205ENST00000414879 KLRF2D3W0D1 207 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 GCFC2P16383 781 aaKnown RBP13.4□□□□□ -0.26
PTPRF-205ENST00000414879 PAK1Q13153 545 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 SLC17A8Q8NDX2 589 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 GOLGA5Q8TBA6 731 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 CCDC102AQ96A19 550 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 SYNCQ9H7C4 482 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 CPDO75976 1380 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 GSTTP1A0A1W2PQM5 241 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 TRAF5O00463 557 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 TXKP42681 527 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 DNM2P50570 870 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 STRN3Q13033 797 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 ENOX2Q16206 610 aaKnown RBP13.4□□□□□ -0.26
PTPRF-205ENST00000414879 KIAA0753Q2KHM9 967 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 ABCB5Q2M3G0 1257 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 DCPSQ96C86 337 aaKnown RBP13.4□□□□□ -0.26
PTPRF-205ENST00000414879 PUF60Q9UHX1 559 aaKnown RBP13.4□□□□□ -0.26
PTPRF-205ENST00000414879 WDR44Q5JSH3 913 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 SULF1Q8IWU6 871 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 JADE2Q9NQC1 790 aa13.4□□□□□ -0.26
PTPRF-205ENST00000414879 A0A1W2PQ27 194 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 A0A1W2PQ64 194 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 A0A1W2PQD8 194 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 PDIA3P30101 505 aaKnown RBP13.39□□□□□ -0.27
PTPRF-205ENST00000414879 ADORA1P30542 326 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 ABCD1P33897 745 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 TCP10Q12799 353 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 CABP7Q86V35 215 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 FBXO11Q86XK2 927 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 EDC3Q96F86 508 aaKnown RBP13.39□□□□□ -0.27
PTPRF-205ENST00000414879 C16orf45Q96MC5 204 aaPredicted RBP13.39□□□□□ -0.27
PTPRF-205ENST00000414879 SUGT1Q9Y2Z0 365 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 C3P01024 1663 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 POLR2MP0CAP2 368 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 CMA1P23946 247 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 LONP1P36776 959 aaKnown RBP13.39□□□□□ -0.27
PTPRF-205ENST00000414879 NEK8Q86SG6 692 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 CCDC24Q8N4L8 307 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 PSTPIP2Q9H939 334 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 TRMT1Q9NXH9 659 aaKnown RBP13.39□□□□□ -0.27
PTPRF-205ENST00000414879 AKR1B15C9JRZ8 316 aaPredicted RBP13.39□□□□□ -0.27
PTPRF-205ENST00000414879 NOP56O00567 594 aaKnown RBP13.39□□□□□ -0.27
PTPRF-205ENST00000414879 POLR2DO15514 142 aaKnown RBP13.39□□□□□ -0.27
PTPRF-205ENST00000414879 TTLL1O95922 423 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 POSTNQ15063 836 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 FBXO18Q8NFZ0 1043 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 PHKBQ93100 1093 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 IGKV5-2P06315 115 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 CLUL1Q15846 466 aa13.39□□□□□ -0.27
PTPRF-205ENST00000414879 SLFN13Q68D06 897 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms