RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CERS3Q8IU89 383 aa14.87□□□□□ -0.03
LIMS2-210ENST00000413578 EAF2Q96CJ1 260 aaPredicted RBP14.87□□□□□ -0.03
LIMS2-210ENST00000413578 KIAA1683Q9H0B3 1180 aa14.87□□□□□ -0.03
LIMS2-210ENST00000413578 FLRT1Q9NZU1 646 aa14.87□□□□□ -0.03
LIMS2-210ENST00000413578 USP17L15C9J2P7 530 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 USP17L13C9JLJ4 530 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 USP17L11C9JVI0 530 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 USP17L18D6R9N7 530 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 USP17L22D6RA61 530 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 USP17L17D6RBQ6 530 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 USP17L19D6RCP7 530 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 USP17L20D6RJB6 530 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 VCAM1P19320 739 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 USP17L24Q0WX57 530 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 ZKSCAN2Q63HK3 967 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 TMED8Q6PL24 325 aaPredicted RBP14.86□□□□□ -0.03
LIMS2-210ENST00000413578 MIGA1Q8NAN2 632 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 MTMR10Q9NXD2 777 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 SERPINB13Q9UIV8 391 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 STXBP5LQ9Y2K9 1186 aa14.86□□□□□ -0.03
LIMS2-210ENST00000413578 SLC15A5A6NIM6 579 aa14.85□□□□□ -0.03
LIMS2-210ENST00000413578 IDH1O75874 414 aaKnown RBP14.85□□□□□ -0.03
LIMS2-210ENST00000413578 PTPREP23469 700 aa14.85□□□□□ -0.03
LIMS2-210ENST00000413578 GUCY1A2P33402 732 aa14.85□□□□□ -0.03
LIMS2-210ENST00000413578 USP14P54578 494 aa14.85□□□□□ -0.03
LIMS2-210ENST00000413578 OS9Q13438 667 aaPredicted RBP14.85□□□□□ -0.03
LIMS2-210ENST00000413578 GRB14Q14449 540 aa14.85□□□□□ -0.03
LIMS2-210ENST00000413578 ACER1Q8TDN7 264 aa14.85□□□□□ -0.03
LIMS2-210ENST00000413578 EDC3Q96F86 508 aaKnown RBP14.85□□□□□ -0.03
LIMS2-210ENST00000413578 RIOK1Q9BRS2 568 aaKnown RBP14.85□□□□□ -0.03
LIMS2-210ENST00000413578 UBE2OQ9C0C9 1292 aaKnown RBP14.85□□□□□ -0.03
LIMS2-210ENST00000413578 CCDC8Q9H0W5 538 aaPredicted RBP14.85□□□□□ -0.03
LIMS2-210ENST00000413578 ANTXR1Q9H6X2 564 aa14.85□□□□□ -0.03
LIMS2-210ENST00000413578 C1orf115Q9H7X2 142 aa14.85□□□□□ -0.03
LIMS2-210ENST00000413578 BTBD7Q9P203 1132 aa14.85□□□□□ -0.03
LIMS2-210ENST00000413578 SPDYE16A6NNV3 312 aaPredicted RBP14.84□□□□□ -0.03
LIMS2-210ENST00000413578 SHMT1P34896 483 aa14.84□□□□□ -0.03
LIMS2-210ENST00000413578 CCNA1P78396 465 aa14.84□□□□□ -0.03
LIMS2-210ENST00000413578 GABPAQ06546 454 aa14.84□□□□□ -0.03
LIMS2-210ENST00000413578 ZYXQ15942 572 aaKnown RBP14.84□□□□□ -0.03
LIMS2-210ENST00000413578 CCAR1Q8IX12 1150 aaKnown RBP14.84□□□□□ -0.03
LIMS2-210ENST00000413578 MAGEB6Q8N7X4 407 aa14.84□□□□□ -0.03
LIMS2-210ENST00000413578 FEZ1Q99689 392 aa14.84□□□□□ -0.03
LIMS2-210ENST00000413578 NDUFB9Q9Y6M9 179 aa14.84□□□□□ -0.03
LIMS2-210ENST00000413578 USP5P45974 858 aa14.83□□□□□ -0.04
LIMS2-210ENST00000413578 PLCD1P51178 756 aa14.83□□□□□ -0.04
LIMS2-210ENST00000413578 RAB3GAP1Q15042 981 aa14.83□□□□□ -0.04
LIMS2-210ENST00000413578 ABCB5Q2M3G0 1257 aa14.83□□□□□ -0.04
LIMS2-210ENST00000413578 CERKLQ49MI3 558 aaPredicted RBP14.83□□□□□ -0.04
LIMS2-210ENST00000413578 MFSD14CQ5VZR4 134 aa14.83□□□□□ -0.04
LIMS2-210ENST00000413578 TTC6Q86TZ1 520 aa14.83□□□□□ -0.04
LIMS2-210ENST00000413578 TRPV1Q8NER1 839 aa14.83□□□□□ -0.04
LIMS2-210ENST00000413578 NPLOC4Q8TAT6 608 aa14.83□□□□□ -0.04
LIMS2-210ENST00000413578 DDX20Q9UHI6 824 aaKnown RBP14.83□□□□□ -0.04
LIMS2-210ENST00000413578 MYO5AQ9Y4I1 1855 aaKnown RBP14.82□□□□□ -0.04
LIMS2-210ENST00000413578 POTEB2H3BUK9 544 aa14.82□□□□□ -0.04
LIMS2-210ENST00000413578 MSCO60682 206 aa14.82□□□□□ -0.04
LIMS2-210ENST00000413578 GLRX3O76003 335 aaKnown RBP14.82□□□□□ -0.04
LIMS2-210ENST00000413578 RLBP1P12271 317 aa14.82□□□□□ -0.04
LIMS2-210ENST00000413578 LPAR1Q92633 364 aa14.82□□□□□ -0.04
LIMS2-210ENST00000413578 CYBAP13498 195 aa14.81□□□□□ -0.04
LIMS2-210ENST00000413578 CYP2C19P33261 490 aa14.81□□□□□ -0.04
LIMS2-210ENST00000413578 MDM2Q00987 491 aaPredicted RBP14.81□□□□□ -0.04
LIMS2-210ENST00000413578 EVX2Q03828 476 aa14.81□□□□□ -0.04
LIMS2-210ENST00000413578 MAP3K12Q12852 859 aa14.81□□□□□ -0.04
LIMS2-210ENST00000413578 FAM109BQ6ICB4 259 aaPredicted RBP14.81□□□□□ -0.04
LIMS2-210ENST00000413578 CEP85Q6P2H3 762 aa14.81□□□□□ -0.04
LIMS2-210ENST00000413578 RPAP3Q9H6T3 665 aaPredicted RBP14.81□□□□□ -0.04
LIMS2-210ENST00000413578 A0A1W2PRG0 241 aa14.8□□□□□ -0.04
LIMS2-210ENST00000413578 DNM1LO00429 736 aa14.8□□□□□ -0.04
LIMS2-210ENST00000413578 SEPT2Q15019 361 aa14.8□□□□□ -0.04
LIMS2-210ENST00000413578 OLFML2BQ68BL8 750 aa14.8□□□□□ -0.04
LIMS2-210ENST00000413578 SENP6Q9GZR1 1112 aaPredicted RBP14.8□□□□□ -0.04
LIMS2-210ENST00000413578 CWC22Q9HCG8 908 aaKnown RBP14.8□□□□□ -0.04
LIMS2-210ENST00000413578 CABP5Q9NP86 173 aa14.8□□□□□ -0.04
LIMS2-210ENST00000413578 ATP2B2Q01814 1243 aa14.79□□□□□ -0.04
LIMS2-210ENST00000413578 WDR78Q5VTH9 848 aa14.79□□□□□ -0.04
LIMS2-210ENST00000413578 MOV10L1Q9BXT6 1211 aaKnown RBP14.79□□□□□ -0.04
LIMS2-210ENST00000413578 IVNS1ABPQ9Y6Y0 642 aa14.79□□□□□ -0.04
LIMS2-210ENST00000413578 UNC80Q8N2C7 3258 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 ADORA2AP29274 412 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 COG2Q14746 738 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 KIAA1755Q5JYT7 1200 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 AACSQ86V21 672 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 ITPRIPQ8IWB1 547 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 SHCBP1Q8NEM2 672 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 GUCD1Q96NT3 240 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 EXOC6BQ9Y2D4 811 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 MYH1P12882 1939 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 FRMPD3Q5JV73 1810 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 ZNF236Q9UL36 1845 aa14.78□□□□□ -0.04
LIMS2-210ENST00000413578 TCRBV5S4A2TA0A5A2 114 aa14.77□□□□□ -0.05
LIMS2-210ENST00000413578 STRNO43815 780 aa14.77□□□□□ -0.05
LIMS2-210ENST00000413578 COBLO75128 1261 aa14.77□□□□□ -0.05
LIMS2-210ENST00000413578 PDE6AP16499 860 aa14.77□□□□□ -0.05
LIMS2-210ENST00000413578 ERCC3P19447 782 aa14.77□□□□□ -0.05
LIMS2-210ENST00000413578 ATN1P54259 1190 aaPredicted RBP14.77□□□□□ -0.05
LIMS2-210ENST00000413578 SNX17Q15036 470 aa14.77□□□□□ -0.05
LIMS2-210ENST00000413578 ERC1Q8IUD2 1116 aa14.77□□□□□ -0.05
LIMS2-210ENST00000413578 SIAH1Q8IUQ4 282 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms