RNA–Protein interactions for RNA: ENST00000412562.1

PHBP3-201, Transcript of prohibitin pseudogene 3, humanhuman

BASIC

Gene PHBP3, Length 819 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHBP3-201ENST00000412562 PORCNQ9H237 461 aa14.93□□□□□ -0.02
PHBP3-201ENST00000412562 DCP1AQ9NPI6 582 aaPredicted RBP14.93□□□□□ -0.02
PHBP3-201ENST00000412562 PAK6Q9NQU5 681 aaPredicted RBP14.93□□□□□ -0.02
PHBP3-201ENST00000412562 CYP2D7A0A087X1C5 515 aa14.92□□□□□ -0.02
PHBP3-201ENST00000412562 A0A1W2PRG0 241 aa14.92□□□□□ -0.02
PHBP3-201ENST00000412562 CNMDO75829 334 aa14.92□□□□□ -0.02
PHBP3-201ENST00000412562 FARP2O94887 1054 aaPredicted RBP14.92□□□□□ -0.02
PHBP3-201ENST00000412562 MBD4O95243 580 aa14.92□□□□□ -0.02
PHBP3-201ENST00000412562 TFRCP02786 760 aaKnown RBP14.92□□□□□ -0.02
PHBP3-201ENST00000412562 ADD2P35612 726 aa14.92□□□□□ -0.02
PHBP3-201ENST00000412562 PDE3AQ14432 1141 aa14.92□□□□□ -0.02
PHBP3-201ENST00000412562 CERS3Q8IU89 383 aa14.92□□□□□ -0.02
PHBP3-201ENST00000412562 DIS3LQ8TF46 1054 aaKnown RBP14.92□□□□□ -0.02
PHBP3-201ENST00000412562 TRIB2Q92519 343 aa14.92□□□□□ -0.02
PHBP3-201ENST00000412562 HAUS7Q99871 368 aa14.92□□□□□ -0.02
PHBP3-201ENST00000412562 PLXNB2O15031 1838 aa14.92□□□□□ -0.02
PHBP3-201ENST00000412562 DDX60LQ5H9U9 1706 aaKnown RBP14.92□□□□□ -0.02
PHBP3-201ENST00000412562 VCAM1P19320 739 aa14.91□□□□□ -0.02
PHBP3-201ENST00000412562 KIAA1755Q5JYT7 1200 aa14.91□□□□□ -0.02
PHBP3-201ENST00000412562 TSHZ3Q63HK5 1081 aa14.91□□□□□ -0.02
PHBP3-201ENST00000412562 TMED8Q6PL24 325 aaPredicted RBP14.91□□□□□ -0.02
PHBP3-201ENST00000412562 CLEC10AQ8IUN9 316 aa14.91□□□□□ -0.02
PHBP3-201ENST00000412562 C12orf42Q96LP6 360 aa14.91□□□□□ -0.02
PHBP3-201ENST00000412562 LRRCC1Q9C099 1032 aa14.91□□□□□ -0.02
PHBP3-201ENST00000412562 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.91□□□□□ -0.02
PHBP3-201ENST00000412562 MPHOSPH10O00566 681 aaKnown RBP14.9□□□□□ -0.02
PHBP3-201ENST00000412562 HMGCRP04035 888 aa14.9□□□□□ -0.02
PHBP3-201ENST00000412562 ERVK-9P63128 1117 aa14.9□□□□□ -0.02
PHBP3-201ENST00000412562 ERVK-24P63145 666 aa14.9□□□□□ -0.02
PHBP3-201ENST00000412562 CCL14Q16627 93 aa14.9□□□□□ -0.02
PHBP3-201ENST00000412562 CATSPERGQ6ZRH7 1159 aa14.9□□□□□ -0.02
PHBP3-201ENST00000412562 GCC1Q96CN9 775 aa14.9□□□□□ -0.02
PHBP3-201ENST00000412562 KIAA1683Q9H0B3 1180 aa14.9□□□□□ -0.02
PHBP3-201ENST00000412562 CRISPLD2Q9H0B8 497 aa14.9□□□□□ -0.02
PHBP3-201ENST00000412562 CABP5Q9NP86 173 aa14.9□□□□□ -0.02
PHBP3-201ENST00000412562 NAV1Q8NEY1 1877 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 USP17L15C9J2P7 530 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 USP17L13C9JLJ4 530 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 USP17L11C9JVI0 530 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 USP17L18D6R9N7 530 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 USP17L22D6RA61 530 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 USP17L17D6RBQ6 530 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 USP17L19D6RCP7 530 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 USP17L20D6RJB6 530 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 AKR1B1P15121 316 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 USP17L24Q0WX57 530 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 CHRDL2Q6WN34 429 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 GPR142Q7Z601 462 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 SIAH1Q8IUQ4 282 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 USP6NLQ92738 828 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 PUS7LQ9H0K6 701 aaKnown RBP14.89□□□□□ -0.03
PHBP3-201ENST00000412562 RPAP3Q9H6T3 665 aaPredicted RBP14.89□□□□□ -0.03
PHBP3-201ENST00000412562 BTBD7Q9P203 1132 aa14.89□□□□□ -0.03
PHBP3-201ENST00000412562 PAWRQ96IZ0 340 aaKnown RBP14.88□□□□□ -0.03
PHBP3-201ENST00000412562 CHMP4BQ9H444 224 aaKnown RBP14.88□□□□□ -0.03
PHBP3-201ENST00000412562 PCDH10Q9P2E7 1040 aa14.88□□□□□ -0.03
PHBP3-201ENST00000412562 SZT2Q5T011 3432 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 SPDYE16A6NNV3 312 aaPredicted RBP14.87□□□□□ -0.03
PHBP3-201ENST00000412562 USP17L12C9JPN9 530 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 USP17L21D6R901 530 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 PRKAR2AP13861 404 aaKnown RBP14.87□□□□□ -0.03
PHBP3-201ENST00000412562 MAPK4P31152 587 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 MNX1P50219 401 aaPredicted RBP14.87□□□□□ -0.03
PHBP3-201ENST00000412562 FXR1P51114 621 aaKnown RBP eCLIP14.87□□□□□ -0.03
PHBP3-201ENST00000412562 USP14P54578 494 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 UBE3CQ15386 1083 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 MORN1Q5T089 497 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 PLEKHH3Q7Z736 793 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 NUDT12Q9BQG2 462 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 DCTPP1Q9H773 170 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 PCDHB15Q9Y5E8 787 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 SLC4A4Q9Y6R1 1079 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 RPTORQ8N122 1335 aa14.87□□□□□ -0.03
PHBP3-201ENST00000412562 CACNB2Q08289 660 aaPredicted RBP14.86□□□□□ -0.03
PHBP3-201ENST00000412562 MAP3K21Q5TCX8 1036 aa14.86□□□□□ -0.03
PHBP3-201ENST00000412562 C12orf60Q5U649 245 aa14.86□□□□□ -0.03
PHBP3-201ENST00000412562 CCAR1Q8IX12 1150 aaKnown RBP14.86□□□□□ -0.03
PHBP3-201ENST00000412562 SPICE1Q8N0Z3 855 aa14.86□□□□□ -0.03
PHBP3-201ENST00000412562 HTATIP2Q9BUP3 242 aa14.86□□□□□ -0.03
PHBP3-201ENST00000412562 HMX1Q9NP08 348 aaPredicted RBP14.86□□□□□ -0.03
PHBP3-201ENST00000412562 ECHDC1Q9NTX5 307 aa14.86□□□□□ -0.03
PHBP3-201ENST00000412562 FLRT1Q9NZU1 646 aa14.86□□□□□ -0.03
PHBP3-201ENST00000412562 RBM27Q9P2N5 1060 aaKnown RBP14.86□□□□□ -0.03
PHBP3-201ENST00000412562 RABGAP1Q9Y3P9 1069 aa14.86□□□□□ -0.03
PHBP3-201ENST00000412562 BAZ2AQ9UIF9 1905 aaKnown RBP14.86□□□□□ -0.03
PHBP3-201ENST00000412562 XRCC5P13010 732 aaKnown RBP14.85□□□□□ -0.03
PHBP3-201ENST00000412562 CCND3P30281 292 aaPredicted RBP14.85□□□□□ -0.03
PHBP3-201ENST00000412562 CDK8P49336 464 aa14.85□□□□□ -0.03
PHBP3-201ENST00000412562 WDR78Q5VTH9 848 aa14.85□□□□□ -0.03
PHBP3-201ENST00000412562 CTR9Q6PD62 1173 aa14.85□□□□□ -0.03
PHBP3-201ENST00000412562 STK11IPQ8N1F8 1099 aa14.85□□□□□ -0.03
PHBP3-201ENST00000412562 OTUD7AQ8TE49 926 aaPredicted RBP14.85□□□□□ -0.03
PHBP3-201ENST00000412562 GTF3C2Q8WUA4 911 aaPredicted RBP14.85□□□□□ -0.03
PHBP3-201ENST00000412562 SOCS4Q8WXH5 440 aa14.85□□□□□ -0.03
PHBP3-201ENST00000412562 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.85□□□□□ -0.03
PHBP3-201ENST00000412562 ATP8A2Q9NTI2 1148 aa14.85□□□□□ -0.03
PHBP3-201ENST00000412562 ZKSCAN1P17029 563 aaPredicted RBP14.84□□□□□ -0.03
PHBP3-201ENST00000412562 RGS2P41220 211 aa14.84□□□□□ -0.03
PHBP3-201ENST00000412562 MAP2K5Q13163 448 aa14.84□□□□□ -0.03
PHBP3-201ENST00000412562 TMEM179Q6ZVK1 233 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms