RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 SHANK3Q9BYB0 1731 aa7.18□□□□□ -1.26
LINC00342-201ENST00000412393 PLSCR1O15162 318 aa7.18□□□□□ -1.26
LINC00342-201ENST00000412393 EPHA1P21709 976 aa7.18□□□□□ -1.26
LINC00342-201ENST00000412393 TRIP4Q15650 581 aaPredicted RBP7.18□□□□□ -1.26
LINC00342-201ENST00000412393 COX20Q5RI15 118 aa7.18□□□□□ -1.26
LINC00342-201ENST00000412393 UBASH3BQ8TF42 649 aa7.18□□□□□ -1.26
LINC00342-201ENST00000412393 KLHDC7BQ96G42 594 aa7.18□□□□□ -1.26
LINC00342-201ENST00000412393 RUSC1Q9BVN2 902 aa7.18□□□□□ -1.26
LINC00342-201ENST00000412393 RASSF4Q9H2L5 321 aa7.18□□□□□ -1.26
LINC00342-201ENST00000412393 VRTNQ9H8Y1 702 aa7.18□□□□□ -1.26
LINC00342-201ENST00000412393 KCNQ2O43526 872 aa7.17□□□□□ -1.26
LINC00342-201ENST00000412393 GLMNQ92990 594 aa7.17□□□□□ -1.26
LINC00342-201ENST00000412393 ACSBG1Q96GR2 724 aa7.17□□□□□ -1.26
LINC00342-201ENST00000412393 ARXQ96QS3 562 aa7.17□□□□□ -1.26
LINC00342-201ENST00000412393 DOT1LQ8TEK3 1739 aa7.17□□□□□ -1.26
LINC00342-201ENST00000412393 CGNL1Q0VF96 1302 aa7.17□□□□□ -1.26
LINC00342-201ENST00000412393 KIF24Q5T7B8 1368 aa7.17□□□□□ -1.26
LINC00342-201ENST00000412393 SMG6Q86US8 1419 aaKnown RBP7.17□□□□□ -1.26
LINC00342-201ENST00000412393 EIF4EBP3O60516 100 aaPredicted RBP7.16□□□□□ -1.26
LINC00342-201ENST00000412393 LGR5O75473 907 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 F13BP05160 661 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 ARL4DP49703 201 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 TXNRD1Q16881 649 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 HSP90AB2PQ58FF8 381 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 COL13A1Q5TAT6 717 aaPredicted RBP7.16□□□□□ -1.26
LINC00342-201ENST00000412393 NBPF6Q5VWK0 638 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 CEP120Q8N960 986 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 ZCRB1Q8TBF4 217 aaKnown RBP7.16□□□□□ -1.26
LINC00342-201ENST00000412393 DDX54Q8TDD1 881 aaKnown RBP7.16□□□□□ -1.26
LINC00342-201ENST00000412393 NBPF4Q96M43 638 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 SUGCTQ9HAC7 445 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 INSRP06213 1382 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 FLT4P35916 1363 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 MEGF6O75095 1541 aa7.16□□□□□ -1.26
LINC00342-201ENST00000412393 PPM1GO15355 546 aaPredicted RBP7.15□□□□□ -1.26
LINC00342-201ENST00000412393 DDX3YO15523 660 aaKnown RBP7.15□□□□□ -1.26
LINC00342-201ENST00000412393 PAOXQ6QHF9 649 aa7.15□□□□□ -1.26
LINC00342-201ENST00000412393 ETFBKMTQ8IXQ9 262 aa7.15□□□□□ -1.26
LINC00342-201ENST00000412393 USHBP1Q8N6Y0 703 aa7.15□□□□□ -1.26
LINC00342-201ENST00000412393 RAPGEF4Q8WZA2 1011 aa7.15□□□□□ -1.26
LINC00342-201ENST00000412393 COL26A1Q96A83 441 aa7.15□□□□□ -1.26
LINC00342-201ENST00000412393 ANP32EQ9BTT0 268 aa7.15□□□□□ -1.26
LINC00342-201ENST00000412393 PPP1R12CQ9BZL4 782 aa7.15□□□□□ -1.26
LINC00342-201ENST00000412393 ABI2Q9NYB9 513 aaPredicted RBP7.15□□□□□ -1.26
LINC00342-201ENST00000412393 CASZ1Q86V15 1759 aa7.15□□□□□ -1.27
LINC00342-201ENST00000412393 ITGB4P16144 1822 aa7.15□□□□□ -1.27
LINC00342-201ENST00000412393 BIN1O00499 593 aa7.14□□□□□ -1.27
LINC00342-201ENST00000412393 LY75O60449 1722 aa7.14□□□□□ -1.27
LINC00342-201ENST00000412393 CDC25BP30305 580 aa7.14□□□□□ -1.27
LINC00342-201ENST00000412393 PKD1L3Q7Z443 1732 aa7.14□□□□□ -1.27
LINC00342-201ENST00000412393 NCAPG2Q86XI2 1143 aa7.14□□□□□ -1.27
LINC00342-201ENST00000412393 FAM200AQ8TCP9 573 aa7.14□□□□□ -1.27
LINC00342-201ENST00000412393 PANK3Q9H999 370 aa7.14□□□□□ -1.27
LINC00342-201ENST00000412393 CYP4F12Q9HCS2 524 aa7.14□□□□□ -1.27
LINC00342-201ENST00000412393 SH2B1Q9NRF2 756 aaPredicted RBP7.14□□□□□ -1.27
LINC00342-201ENST00000412393 WASHC2AQ641Q2 1341 aa7.13□□□□□ -1.27
LINC00342-201ENST00000412393 A6NJR5 290 aa7.13□□□□□ -1.27
LINC00342-201ENST00000412393 DBX1A6NMT0 343 aa7.13□□□□□ -1.27
LINC00342-201ENST00000412393 CYP26A1O43174 497 aa7.13□□□□□ -1.27
LINC00342-201ENST00000412393 TNNT2P45379 298 aaPredicted RBP7.13□□□□□ -1.27
LINC00342-201ENST00000412393 FBLN7Q53RD9 439 aa7.13□□□□□ -1.27
LINC00342-201ENST00000412393 C16orf46Q6P387 395 aa7.13□□□□□ -1.27
LINC00342-201ENST00000412393 NFXL1Q6ZNB6 911 aa7.13□□□□□ -1.27
LINC00342-201ENST00000412393 FBXL6Q8N531 539 aa7.13□□□□□ -1.27
LINC00342-201ENST00000412393 SMG8Q8ND04 991 aaKnown RBP7.13□□□□□ -1.27
LINC00342-201ENST00000412393 SYTL4Q96C24 671 aaPredicted RBP7.13□□□□□ -1.27
LINC00342-201ENST00000412393 POP1Q99575 1024 aaKnown RBP7.13□□□□□ -1.27
LINC00342-201ENST00000412393 STK32BQ9NY57 414 aa7.13□□□□□ -1.27
LINC00342-201ENST00000412393 POLKQ9UBT6 870 aa7.13□□□□□ -1.27
LINC00342-201ENST00000412393 SUPT16HQ9Y5B9 1047 aaKnown RBP7.13□□□□□ -1.27
LINC00342-201ENST00000412393 PAPPAQ13219 1627 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 NSD2O96028 1365 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 SRCAPQ6ZRS2 3230 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 FAM95CA0A1B0GW59 222 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 SLC15A2Q16348 729 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 SWI5Q1ZZU3 235 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 SGO2Q562F6 1265 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 PDE12Q6L8Q7 609 aaKnown RBP7.12□□□□□ -1.27
LINC00342-201ENST00000412393 YIPF2Q9BWQ6 316 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 ZMYND15Q9H091 742 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 SPON1Q9HCB6 807 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 TUBGCP6Q96RT7 1819 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 QSER1Q2KHR3 1735 aa7.12□□□□□ -1.27
LINC00342-201ENST00000412393 TAF1LQ8IZX4 1826 aa7.11□□□□□ -1.27
LINC00342-201ENST00000412393 PCDH11XQ9BZA7 1347 aa7.11□□□□□ -1.27
LINC00342-201ENST00000412393 PCDH11YQ9BZA8 1340 aa7.11□□□□□ -1.27
LINC00342-201ENST00000412393 TOGARAM1Q9Y4F4 1720 aa7.11□□□□□ -1.27
LINC00342-201ENST00000412393 TIAF1O95411 115 aa7.11□□□□□ -1.27
LINC00342-201ENST00000412393 C19orf57Q0VDD7 668 aa7.11□□□□□ -1.27
LINC00342-201ENST00000412393 FKBP5Q13451 457 aaPredicted RBP7.11□□□□□ -1.27
LINC00342-201ENST00000412393 TMPRSS13Q9BYE2 586 aa7.11□□□□□ -1.27
LINC00342-201ENST00000412393 PPP1R1BQ9UD71 204 aaPredicted RBP7.11□□□□□ -1.27
LINC00342-201ENST00000412393 KNSTRNQ9Y448 316 aa7.11□□□□□ -1.27
LINC00342-201ENST00000412393 NCAPD2Q15021 1401 aa7.1□□□□□ -1.27
LINC00342-201ENST00000412393 KIF7Q2M1P5 1343 aa7.1□□□□□ -1.27
LINC00342-201ENST00000412393 NLRP12P59046 1061 aa7.1□□□□□ -1.27
LINC00342-201ENST00000412393 CYP27A1Q02318 531 aa7.1□□□□□ -1.27
LINC00342-201ENST00000412393 EIF4A2Q14240 407 aaKnown RBP7.1□□□□□ -1.27
LINC00342-201ENST00000412393 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
LINC00342-201ENST00000412393 ADAMTSL4Q6UY14 1074 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms