RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 SASH1O94885 1247 aa4.91□□□□□ -1.62
HMGB3P2-201ENST00000411913 CST3P01034 146 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P2-201ENST00000411913 TPP2P29144 1249 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P2-201ENST00000411913 RASIP1Q5U651 963 aa4.91□□□□□ -1.62
HMGB3P2-201ENST00000411913 ERICH6BQ5W0A0 696 aa4.91□□□□□ -1.62
HMGB3P2-201ENST00000411913 SGPP1Q9BX95 441 aa4.91□□□□□ -1.62
HMGB3P2-201ENST00000411913 RBCK1Q9BYM8 510 aa4.91□□□□□ -1.62
HMGB3P2-201ENST00000411913 TRIT1Q9H3H1 467 aaKnown RBP4.91□□□□□ -1.62
HMGB3P2-201ENST00000411913 PPM1HQ9ULR3 514 aa4.91□□□□□ -1.62
HMGB3P2-201ENST00000411913 PNMA6FA0A0J9YX94 578 aa4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 TEX51A0A1B0GUA7 166 aa4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 FITM1A5D6W6 292 aa4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 TRIM13O60858 407 aa4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 EGR3Q06889 387 aa4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 PCNX4Q63HM2 1172 aa4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 DHX38Q92620 1227 aaKnown RBP4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 INTS4Q96HW7 963 aaKnown RBP4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 CWC22Q9HCG8 908 aaKnown RBP4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 GPATCH2Q9NW75 528 aa4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 RTEL1Q9NZ71 1219 aa4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 DUSP13Q9UII6 198 aa4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 SNCAIPQ9Y6H5 919 aa4.9□□□□□ -1.63
HMGB3P2-201ENST00000411913 RBAK-RBAKDNI3L0D1 243 aa4.89□□□□□ -1.63
HMGB3P2-201ENST00000411913 ZGLP1P0C6A0 271 aa4.89□□□□□ -1.63
HMGB3P2-201ENST00000411913 GRK4P32298 578 aa4.89□□□□□ -1.63
HMGB3P2-201ENST00000411913 ETV3P41162 512 aa4.89□□□□□ -1.63
HMGB3P2-201ENST00000411913 PLCB3Q01970 1234 aa4.89□□□□□ -1.63
HMGB3P2-201ENST00000411913 PTPN11Q06124 597 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P2-201ENST00000411913 WIPI1Q5MNZ9 446 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P2-201ENST00000411913 ERICH6Q7L0X2 663 aa4.89□□□□□ -1.63
HMGB3P2-201ENST00000411913 CXorf38Q8TB03 319 aa4.89□□□□□ -1.63
HMGB3P2-201ENST00000411913 ZNF552Q9H707 407 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P2-201ENST00000411913 YBX2Q9Y2T7 364 aaKnown RBP4.89□□□□□ -1.63
HMGB3P2-201ENST00000411913 CELA3BP08861 270 aa4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 LTKP29376 864 aa4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 SKOR2Q2VWA4 1001 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 TIGD5Q53EQ6 642 aa4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 TMC7Q7Z402 723 aa4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 GGNQ86UU5 652 aa4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 SPPL2CQ8IUH8 684 aa4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 BORCS6Q96GS4 357 aa4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 SRCIN1Q9C0H9 1055 aa4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 DUSP15Q9H1R2 295 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 SP110Q9HB58 689 aa4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 GPR160Q9UJ42 338 aa4.88□□□□□ -1.63
HMGB3P2-201ENST00000411913 CELA3AP09093 270 aa4.87□□□□□ -1.63
HMGB3P2-201ENST00000411913 SSPNQ14714 243 aa4.87□□□□□ -1.63
HMGB3P2-201ENST00000411913 GAB4Q2WGN9 574 aa4.87□□□□□ -1.63
HMGB3P2-201ENST00000411913 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P2-201ENST00000411913 DPH2Q9BQC3 489 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P2-201ENST00000411913 GCM1Q9NP62 436 aa4.87□□□□□ -1.63
HMGB3P2-201ENST00000411913 USTQ9Y2C2 406 aa4.87□□□□□ -1.63
HMGB3P2-201ENST00000411913 OTOL1A6NHN0 477 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P2-201ENST00000411913 PI3P19957 117 aa4.86□□□□□ -1.63
HMGB3P2-201ENST00000411913 CDK8P49336 464 aa4.86□□□□□ -1.63
HMGB3P2-201ENST00000411913 SNX17Q15036 470 aa4.86□□□□□ -1.63
HMGB3P2-201ENST00000411913 NR0B2Q15466 257 aa4.86□□□□□ -1.63
HMGB3P2-201ENST00000411913 ENOX2Q16206 610 aaKnown RBP4.86□□□□□ -1.63
HMGB3P2-201ENST00000411913 PPP1R13LQ8WUF5 828 aa4.86□□□□□ -1.63
HMGB3P2-201ENST00000411913 Q96M66 194 aa4.86□□□□□ -1.63
HMGB3P2-201ENST00000411913 XYLT2Q9H1B5 865 aa4.86□□□□□ -1.63
HMGB3P2-201ENST00000411913 IRAK3Q9Y616 596 aa4.86□□□□□ -1.63
HMGB3P2-201ENST00000411913 PGRP06401 933 aa4.85□□□□□ -1.63
HMGB3P2-201ENST00000411913 LMNB1P20700 586 aa4.85□□□□□ -1.63
HMGB3P2-201ENST00000411913 CHRNEQ04844 493 aa4.85□□□□□ -1.63
HMGB3P2-201ENST00000411913 TSPYL5Q86VY4 417 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P2-201ENST00000411913 ZDHHC14Q8IZN3 488 aa4.85□□□□□ -1.63
HMGB3P2-201ENST00000411913 PANK1Q8TE04 598 aa4.85□□□□□ -1.63
HMGB3P2-201ENST00000411913 SIGLEC10Q96LC7 697 aa4.85□□□□□ -1.63
HMGB3P2-201ENST00000411913 TMPRSS5Q9H3S3 457 aa4.85□□□□□ -1.63
HMGB3P2-201ENST00000411913 KCNH3Q9ULD8 1083 aa4.85□□□□□ -1.63
HMGB3P2-201ENST00000411913 PCDHA11Q9Y5I1 949 aa4.85□□□□□ -1.63
HMGB3P2-201ENST00000411913 OR14I1A6ND48 311 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 GIPC1O14908 333 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 ADRB1P08588 477 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 GALK1P51570 392 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 AFF3P51826 1226 aaKnown RBP4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 DUSP4Q13115 394 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 SLC6A19Q695T7 634 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 TXNDC2Q86VQ3 553 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 MRPL41Q8IXM3 137 aaKnown RBP4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 FEZF2Q8TBJ5 459 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 GAL3ST3Q96A11 431 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 TMEM87BQ96K49 555 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 OSBPL7Q9BZF2 842 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 GPR62Q9BZJ7 368 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 SIRT5Q9NXA8 310 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 BIN2Q9UBW5 565 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 TJP2Q9UDY2 1190 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 TIMELESSQ9UNS1 1208 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 CEP131Q9UPN4 1083 aa4.84□□□□□ -1.63
HMGB3P2-201ENST00000411913 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
HMGB3P2-201ENST00000411913 SRSF3P84103 164 aaKnown RBP4.83□□□□□ -1.64
HMGB3P2-201ENST00000411913 NFKB2Q00653 900 aa4.83□□□□□ -1.64
HMGB3P2-201ENST00000411913 DSC3Q14574 896 aa4.83□□□□□ -1.64
HMGB3P2-201ENST00000411913 ADGRF1Q5T601 910 aa4.83□□□□□ -1.64
HMGB3P2-201ENST00000411913 SIRT2Q8IXJ6 389 aa4.83□□□□□ -1.64
HMGB3P2-201ENST00000411913 ANKS4BQ8N8V4 417 aa4.83□□□□□ -1.64
HMGB3P2-201ENST00000411913 FBF1Q8TES7 1133 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms