RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 CCDC84Q86UT8 332 aaPredicted RBP24.3■■□□□ 1.48
C4orf48-202ENST00000409860 CCDC102AQ96A19 550 aa24.3■■□□□ 1.48
C4orf48-202ENST00000409860 CEP95Q96GE4 821 aa24.3■■□□□ 1.48
C4orf48-202ENST00000409860 WNK4Q96J92 1243 aa24.3■■□□□ 1.48
C4orf48-202ENST00000409860 SART3Q15020 963 aaKnown RBP24.29■■□□□ 1.48
C4orf48-202ENST00000409860 DEFB115Q30KQ5 88 aa24.29■■□□□ 1.48
C4orf48-202ENST00000409860 CYB5R4Q7L1T6 521 aa24.29■■□□□ 1.48
C4orf48-202ENST00000409860 RASAL3Q86YV0 1011 aa24.29■■□□□ 1.48
C4orf48-202ENST00000409860 ZNF280CQ8ND82 737 aa24.29■■□□□ 1.48
C4orf48-202ENST00000409860 NKX2-3Q8TAU0 364 aa24.29■■□□□ 1.48
C4orf48-202ENST00000409860 CNKSR2Q8WXI2 1034 aa24.29■■□□□ 1.48
C4orf48-202ENST00000409860 WDR18Q9BV38 432 aa24.29■■□□□ 1.48
C4orf48-202ENST00000409860 ARHGEF10LQ9HCE6 1279 aa24.29■■□□□ 1.48
C4orf48-202ENST00000409860 MTMR4Q9NYA4 1195 aa24.29■■□□□ 1.48
C4orf48-202ENST00000409860 TTLL1O95922 423 aa24.28■■□□□ 1.48
C4orf48-202ENST00000409860 SLC10A3P09131 477 aa24.28■■□□□ 1.48
C4orf48-202ENST00000409860 ZBTB48P10074 688 aaPredicted RBP24.28■■□□□ 1.48
C4orf48-202ENST00000409860 RBM25P49756 843 aaKnown RBP24.28■■□□□ 1.48
C4orf48-202ENST00000409860 ATP2B2Q01814 1243 aa24.28■■□□□ 1.48
C4orf48-202ENST00000409860 BLOC1S2Q6QNY1 142 aa24.28■■□□□ 1.48
C4orf48-202ENST00000409860 CLEC10AQ8IUN9 316 aa24.28■■□□□ 1.48
C4orf48-202ENST00000409860 ZSCAN10Q96SZ4 725 aaPredicted RBP24.28■■□□□ 1.48
C4orf48-202ENST00000409860 SH2D4AQ9H788 454 aa24.28■■□□□ 1.48
C4orf48-202ENST00000409860 IL17RBQ9NRM6 502 aa24.28■■□□□ 1.48
C4orf48-202ENST00000409860 NYAP2Q9P242 653 aa24.28■■□□□ 1.48
C4orf48-202ENST00000409860 ERICH2A1L162 156 aa24.27■■□□□ 1.48
C4orf48-202ENST00000409860 PRC1O43663 620 aa24.27■■□□□ 1.48
C4orf48-202ENST00000409860 NMT2O60551 498 aa24.27■■□□□ 1.48
C4orf48-202ENST00000409860 EEF2P13639 858 aaKnown RBP24.27■■□□□ 1.48
C4orf48-202ENST00000409860 CASTP20810 708 aaKnown RBP24.27■■□□□ 1.48
C4orf48-202ENST00000409860 SPRYD7Q5W111 196 aa24.27■■□□□ 1.48
C4orf48-202ENST00000409860 DHX32Q7L7V1 743 aaKnown RBP24.27■■□□□ 1.48
C4orf48-202ENST00000409860 FEZ1Q99689 392 aa24.27■■□□□ 1.48
C4orf48-202ENST00000409860 ZKSCAN3Q9BRR0 538 aa24.27■■□□□ 1.48
C4orf48-202ENST00000409860 TM6SF1Q9BZW5 370 aa24.27■■□□□ 1.48
C4orf48-202ENST00000409860 STX8Q9UNK0 236 aa24.27■■□□□ 1.48
C4orf48-202ENST00000409860 AFG3L2Q9Y4W6 797 aa24.27■■□□□ 1.48
C4orf48-202ENST00000409860 TRIM75PA6NK02 468 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 IRF6O14896 467 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 GJA5P36382 358 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 ECE1P42892 770 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 ANTXR2P58335 489 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 SPP2Q13103 211 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 CHST3Q7LGC8 479 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 IL17RAQ96F46 866 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 MTA3Q9BTC8 594 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 TNKSO95271 1327 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 WDR19Q8NEZ3 1342 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 ATAD5Q96QE3 1844 aa24.26■■□□□ 1.47
C4orf48-202ENST00000409860 CXCL11O14625 94 aa24.25■■□□□ 1.47
C4orf48-202ENST00000409860 IFIT3O14879 490 aaKnown RBP24.25■■□□□ 1.47
C4orf48-202ENST00000409860 MKRN3Q13064 507 aaKnown RBP24.25■■□□□ 1.47
C4orf48-202ENST00000409860 DGKHQ86XP1 1220 aa24.25■■□□□ 1.47
C4orf48-202ENST00000409860 ACER1Q8TDN7 264 aa24.25■■□□□ 1.47
C4orf48-202ENST00000409860 TMEM87BQ96K49 555 aa24.25■■□□□ 1.47
C4orf48-202ENST00000409860 TTC14Q96N46 770 aa24.25■■□□□ 1.47
C4orf48-202ENST00000409860 TBC1D32Q96NH3 1257 aa24.25■■□□□ 1.47
C4orf48-202ENST00000409860 CLIP2Q9UDT6 1046 aa24.25■■□□□ 1.47
C4orf48-202ENST00000409860 KCNH4Q9UQ05 1017 aa24.25■■□□□ 1.47
C4orf48-202ENST00000409860 CYP46A1Q9Y6A2 500 aa24.25■■□□□ 1.47
C4orf48-202ENST00000409860 GREB1LQ9C091 1923 aaPredicted RBP24.25■■□□□ 1.47
C4orf48-202ENST00000409860 USP17L10C9JJH3 530 aa24.24■■□□□ 1.47
C4orf48-202ENST00000409860 USP14P54578 494 aa24.24■■□□□ 1.47
C4orf48-202ENST00000409860 HTRA3P83110 453 aa24.24■■□□□ 1.47
C4orf48-202ENST00000409860 GRM1Q13255 1194 aa24.24■■□□□ 1.47
C4orf48-202ENST00000409860 SNAPC2Q13487 334 aa24.24■■□□□ 1.47
C4orf48-202ENST00000409860 MTMR2Q13614 643 aa24.24■■□□□ 1.47
C4orf48-202ENST00000409860 TMEM67Q5HYA8 995 aa24.24■■□□□ 1.47
C4orf48-202ENST00000409860 CYP4F22Q6NT55 531 aa24.24■■□□□ 1.47
C4orf48-202ENST00000409860 CAPNS2Q96L46 248 aa24.24■■□□□ 1.47
C4orf48-202ENST00000409860 ZSWIM6Q9HCJ5 1215 aa24.24■■□□□ 1.47
C4orf48-202ENST00000409860 SYNPO2Q9UMS6 1093 aa24.24■■□□□ 1.47
C4orf48-202ENST00000409860 C19orf81C9J6K1 198 aa24.23■■□□□ 1.47
C4orf48-202ENST00000409860 RPS6KB1P23443 525 aa24.23■■□□□ 1.47
C4orf48-202ENST00000409860 NOVP48745 357 aa24.23■■□□□ 1.47
C4orf48-202ENST00000409860 GTF2A2P52657 109 aa24.23■■□□□ 1.47
C4orf48-202ENST00000409860 BACE1P56817 501 aa24.23■■□□□ 1.47
C4orf48-202ENST00000409860 EXOSC10Q01780 885 aaKnown RBP24.23■■□□□ 1.47
C4orf48-202ENST00000409860 RUFY3Q7L099 469 aa24.23■■□□□ 1.47
C4orf48-202ENST00000409860 SIAH1Q8IUQ4 282 aa24.23■■□□□ 1.47
C4orf48-202ENST00000409860 ENAHQ8N8S7 591 aaPredicted RBP24.23■■□□□ 1.47
C4orf48-202ENST00000409860 KIAA1683Q9H0B3 1180 aa24.23■■□□□ 1.47
C4orf48-202ENST00000409860 TMX2Q9Y320 296 aa24.23■■□□□ 1.47
C4orf48-202ENST00000409860 A0A1W2PRG0 241 aa24.22■■□□□ 1.47
C4orf48-202ENST00000409860 FAM155AB1AL88 458 aaPredicted RBP24.22■■□□□ 1.47
C4orf48-202ENST00000409860 TOP1P11387 765 aaKnown RBP24.22■■□□□ 1.47
C4orf48-202ENST00000409860 CPA1P15085 419 aa24.22■■□□□ 1.47
C4orf48-202ENST00000409860 FGD1P98174 961 aa24.22■■□□□ 1.47
C4orf48-202ENST00000409860 COL9A3Q14050 684 aaPredicted RBP24.22■■□□□ 1.47
C4orf48-202ENST00000409860 WTAPQ15007 396 aa24.22■■□□□ 1.47
C4orf48-202ENST00000409860 IFIT1BQ5T764 474 aaKnown RBP24.22■■□□□ 1.47
C4orf48-202ENST00000409860 USP17L2Q6R6M4 530 aa24.22■■□□□ 1.47
C4orf48-202ENST00000409860 ANKS1AQ92625 1134 aa24.22■■□□□ 1.47
C4orf48-202ENST00000409860 MKL1Q969V6 931 aa24.22■■□□□ 1.47
C4orf48-202ENST00000409860 GOPCQ9HD26 462 aa24.22■■□□□ 1.47
C4orf48-202ENST00000409860 SH2B2O14492 632 aaPredicted RBP24.21■■□□□ 1.47
C4orf48-202ENST00000409860 NOGQ13253 232 aa24.21■■□□□ 1.47
C4orf48-202ENST00000409860 SEC23AQ15436 765 aa24.21■■□□□ 1.47
C4orf48-202ENST00000409860 ZYXQ15942 572 aaKnown RBP24.21■■□□□ 1.47
C4orf48-202ENST00000409860 RCSD1Q6JBY9 416 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms