RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 NCOA5Q9HCD5 579 aaKnown RBP16.96■□□□□ 0.31
TTC7A-204ENST00000409825 GINS2Q9Y248 185 aa16.96■□□□□ 0.31
TTC7A-204ENST00000409825 BICDL2A1A5D9 508 aa16.96■□□□□ 0.31
TTC7A-204ENST00000409825 CNPY2Q9Y2B0 182 aa16.96■□□□□ 0.31
TTC7A-204ENST00000409825 USP32Q8NFA0 1604 aa16.96■□□□□ 0.31
TTC7A-204ENST00000409825 BMP3P12645 472 aa16.96■□□□□ 0.31
TTC7A-204ENST00000409825 TXKP42681 527 aa16.96■□□□□ 0.31
TTC7A-204ENST00000409825 SPAG5Q96R06 1193 aa16.96■□□□□ 0.31
TTC7A-204ENST00000409825 TESPA1A2RU30 521 aaPredicted RBP16.96■□□□□ 0.31
TTC7A-204ENST00000409825 GDF11O95390 407 aa16.96■□□□□ 0.31
TTC7A-204ENST00000409825 FAM47CQ5HY64 1035 aa16.96■□□□□ 0.31
TTC7A-204ENST00000409825 TMEM179Q6ZVK1 233 aa16.96■□□□□ 0.31
TTC7A-204ENST00000409825 FAM160B2Q86V87 743 aa16.96■□□□□ 0.31
TTC7A-204ENST00000409825 NUP88Q99567 741 aaPredicted RBP16.96■□□□□ 0.31
TTC7A-204ENST00000409825 LRRC7Q96NW7 1537 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 LRWD1Q9UFC0 647 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 EXOC7Q9UPT5 735 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 TBC1D5Q92609 795 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 GAS7O60861 476 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 EPHA10Q5JZY3 1008 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 NCAPH2Q6IBW4 605 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 MIGA2Q7L4E1 593 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 TDRD3Q9H7E2 651 aaKnown RBP16.95■□□□□ 0.3
TTC7A-204ENST00000409825 PCDHA1Q9Y5I3 950 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 FRMPD2Q68DX3 1309 aaPredicted RBP16.95■□□□□ 0.3
TTC7A-204ENST00000409825 ZNF165P49910 485 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 STRN3Q13033 797 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 OTUD6AQ7L8S5 288 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 NBPF3Q9H094 633 aa16.95■□□□□ 0.3
TTC7A-204ENST00000409825 N4BP3O15049 544 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 DPEP1P16444 411 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 TAF12Q16514 161 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 KIF4BQ2VIQ3 1234 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 FAM212AQ96EL1 285 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 TRIM6Q9C030 488 aaPredicted RBP16.94■□□□□ 0.3
TTC7A-204ENST00000409825 HACL1Q9UJ83 578 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 DNM1Q05193 864 aaKnown RBP16.94■□□□□ 0.3
TTC7A-204ENST00000409825 CALCRLQ16602 461 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 STRIP1Q5VSL9 837 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 GIMAP6Q6P9H5 292 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 CTAGE1Q96RT6 745 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 ANTXR1Q9H6X2 564 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 GPBP1L1Q9HC44 474 aaPredicted RBP16.94■□□□□ 0.3
TTC7A-204ENST00000409825 USO1O60763 962 aaKnown RBP16.94■□□□□ 0.3
TTC7A-204ENST00000409825 TGFB2P61812 414 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 KRT40Q6A162 431 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 ERCC4Q92889 916 aaPredicted RBP16.94■□□□□ 0.3
TTC7A-204ENST00000409825 PHKBQ93100 1093 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 DNM3Q9UQ16 869 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 CCDC169A6NNP5 214 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 ENOX2Q16206 610 aaKnown RBP16.94■□□□□ 0.3
TTC7A-204ENST00000409825 IQCEQ6IPM2 695 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 SPICE1Q8N0Z3 855 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 LCORLQ8N3X6 602 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 TBC1D16Q8TBP0 767 aa16.94■□□□□ 0.3
TTC7A-204ENST00000409825 AP5M1Q9H0R1 490 aa16.93■□□□□ 0.3
TTC7A-204ENST00000409825 DDX39AO00148 427 aaKnown RBP16.93■□□□□ 0.3
TTC7A-204ENST00000409825 ADCY9O60503 1353 aa16.93■□□□□ 0.3
TTC7A-204ENST00000409825 SYT1P21579 422 aa16.93■□□□□ 0.3
TTC7A-204ENST00000409825 WRNIP1Q96S55 665 aa16.93■□□□□ 0.3
TTC7A-204ENST00000409825 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.92■□□□□ 0.3
TTC7A-204ENST00000409825 SNX29Q8TEQ0 813 aa16.92■□□□□ 0.3
TTC7A-204ENST00000409825 MMRN2Q9H8L6 949 aa16.92■□□□□ 0.3
TTC7A-204ENST00000409825 POTEB2H3BUK9 544 aa16.92■□□□□ 0.3
TTC7A-204ENST00000409825 PLSCR1O15162 318 aa16.92■□□□□ 0.3
TTC7A-204ENST00000409825 SYNCQ9H7C4 482 aa16.92■□□□□ 0.3
TTC7A-204ENST00000409825 STAT2P52630 851 aa16.92■□□□□ 0.3
TTC7A-204ENST00000409825 COL23A1Q86Y22 540 aaPredicted RBP16.92■□□□□ 0.3
TTC7A-204ENST00000409825 SCG2P13521 617 aa16.92■□□□□ 0.3
TTC7A-204ENST00000409825 PRDX5P30044 214 aa16.92■□□□□ 0.3
TTC7A-204ENST00000409825 ANO1Q5XXA6 986 aa16.92■□□□□ 0.3
TTC7A-204ENST00000409825 PIH1D3Q9NQM4 214 aaKnown RBP16.92■□□□□ 0.3
TTC7A-204ENST00000409825 MIER3Q7Z3K6 550 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 MAP7D2Q96T17 732 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 MCAMP43121 646 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 PNMA8AQ86V59 439 aaPredicted RBP16.91■□□□□ 0.3
TTC7A-204ENST00000409825 CDHR1Q96JP9 859 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 FNBP1Q96RU3 617 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.91■□□□□ 0.3
TTC7A-204ENST00000409825 NT5C3AQ9H0P0 336 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 VPS54Q9P1Q0 977 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 CNOT7Q9UIV1 285 aaKnown RBP16.91■□□□□ 0.3
TTC7A-204ENST00000409825 BCORL1Q5H9F3 1711 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 hCG_1984214I3L0E3 225 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 RPS12P25398 132 aaKnown RBP16.91■□□□□ 0.3
TTC7A-204ENST00000409825 SMIM5Q71RC9 77 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 BLIDQ8IZY5 108 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 ZNF713Q8N859 430 aaPredicted RBP16.91■□□□□ 0.3
TTC7A-204ENST00000409825 GRPEL1Q9HAV7 217 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 IQGAP1P46940 1657 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 LPXNO60711 386 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 MAP4K1Q92918 833 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 RABGAP1Q9Y3P9 1069 aa16.91■□□□□ 0.3
TTC7A-204ENST00000409825 LMNB1P20700 586 aa16.9■□□□□ 0.3
TTC7A-204ENST00000409825 USP17L5A8MUK1 530 aa16.9■□□□□ 0.3
TTC7A-204ENST00000409825 ZSCAN12O43309 604 aa16.9■□□□□ 0.3
TTC7A-204ENST00000409825 ZEB2O60315 1214 aa16.9■□□□□ 0.3
TTC7A-204ENST00000409825 FMNL1O95466 1100 aaPredicted RBP16.9■□□□□ 0.3
TTC7A-204ENST00000409825 GOLGA8HP0CJ92 632 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms