RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 FKTNO75072 461 aa12.97□□□□□ -0.33
CHMP3-205ENST00000409810 AKR1B1P15121 316 aa12.97□□□□□ -0.33
CHMP3-205ENST00000409810 JAG1P78504 1218 aa12.97□□□□□ -0.33
CHMP3-205ENST00000409810 ICA1Q05084 483 aa12.97□□□□□ -0.33
CHMP3-205ENST00000409810 MOGSQ13724 837 aa12.97□□□□□ -0.33
CHMP3-205ENST00000409810 SEPT2Q15019 361 aa12.97□□□□□ -0.33
CHMP3-205ENST00000409810 SHROOM1Q2M3G4 852 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-205ENST00000409810 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
CHMP3-205ENST00000409810 ARHGEF10LQ9HCE6 1279 aa12.97□□□□□ -0.33
CHMP3-205ENST00000409810 FOXP2O15409 715 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 TLR2O60603 784 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 FGAP02671 866 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 OSBPP22059 807 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 GUCY1A2P33402 732 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 BMP2KLQ5H9B9 411 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 GPAT2Q6NUI2 795 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 ZNF296Q8WUU4 475 aaPredicted RBP12.96□□□□□ -0.33
CHMP3-205ENST00000409810 ERO1AQ96HE7 468 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 DSCC1Q9BVC3 393 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 KIAA1683Q9H0B3 1180 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 KANSL2Q9H9L4 492 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 ANAPC4Q9UJX5 808 aa12.96□□□□□ -0.33
CHMP3-205ENST00000409810 SMIM22K7EJ46 135 aa12.95□□□□□ -0.34
CHMP3-205ENST00000409810 PCP11498 1178 aaKnown RBP12.95□□□□□ -0.34
CHMP3-205ENST00000409810 RASA1P20936 1047 aa12.95□□□□□ -0.34
CHMP3-205ENST00000409810 CHMLP26374 656 aa12.95□□□□□ -0.34
CHMP3-205ENST00000409810 SP3Q02447 781 aa12.95□□□□□ -0.34
CHMP3-205ENST00000409810 ARHGEF6Q15052 776 aa12.95□□□□□ -0.34
CHMP3-205ENST00000409810 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
CHMP3-205ENST00000409810 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
CHMP3-205ENST00000409810 SMCR8Q8TEV9 937 aaPredicted RBP12.95□□□□□ -0.34
CHMP3-205ENST00000409810 C12orf42Q96LP6 360 aa12.95□□□□□ -0.34
CHMP3-205ENST00000409810 CTNNA3Q9UI47 895 aa12.95□□□□□ -0.34
CHMP3-205ENST00000409810 MGAMO43451 1857 aa12.95□□□□□ -0.34
CHMP3-205ENST00000409810 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
CHMP3-205ENST00000409810 TSPY3P0CV98 308 aa12.94□□□□□ -0.34
CHMP3-205ENST00000409810 TSPY8P0CW00 308 aa12.94□□□□□ -0.34
CHMP3-205ENST00000409810 NT5C2P49902 561 aa12.94□□□□□ -0.34
CHMP3-205ENST00000409810 IRX3P78415 501 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-205ENST00000409810 KIF22Q14807 665 aa12.94□□□□□ -0.34
CHMP3-205ENST00000409810 TREML2Q5T2D2 321 aa12.94□□□□□ -0.34
CHMP3-205ENST00000409810 COL13A1Q5TAT6 717 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-205ENST00000409810 ACER1Q8TDN7 264 aa12.94□□□□□ -0.34
CHMP3-205ENST00000409810 GTF3C2Q8WUA4 911 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-205ENST00000409810 R3HDMLQ9H3Y0 253 aa12.94□□□□□ -0.34
CHMP3-205ENST00000409810 RNF41Q9H4P4 317 aaPredicted RBP12.94□□□□□ -0.34
CHMP3-205ENST00000409810 TSPY2A6NKD2 308 aa12.93□□□□□ -0.34
CHMP3-205ENST00000409810 ZNF213O14771 459 aa12.93□□□□□ -0.34
CHMP3-205ENST00000409810 PRDM1O75626 825 aa12.93□□□□□ -0.34
CHMP3-205ENST00000409810 CYP2C8P10632 490 aa12.93□□□□□ -0.34
CHMP3-205ENST00000409810 HOXA7P31268 230 aaPredicted RBP12.93□□□□□ -0.34
CHMP3-205ENST00000409810 ATP2B2Q01814 1243 aa12.93□□□□□ -0.34
CHMP3-205ENST00000409810 CTDSPL2Q05D32 466 aa12.93□□□□□ -0.34
CHMP3-205ENST00000409810 ZYXQ15942 572 aaKnown RBP12.93□□□□□ -0.34
CHMP3-205ENST00000409810 IMMTQ16891 758 aaKnown RBP12.93□□□□□ -0.34
CHMP3-205ENST00000409810 CTU1Q7Z7A3 348 aaKnown RBP12.93□□□□□ -0.34
CHMP3-205ENST00000409810 LPAR1Q92633 364 aa12.93□□□□□ -0.34
CHMP3-205ENST00000409810 GOPCQ9HD26 462 aa12.93□□□□□ -0.34
CHMP3-205ENST00000409810 TOMM22Q9NS69 142 aa12.93□□□□□ -0.34
CHMP3-205ENST00000409810 TMX2Q9Y320 296 aa12.93□□□□□ -0.34
CHMP3-205ENST00000409810 ADGRA2Q96PE1 1338 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 USP17L15C9J2P7 530 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 USP17L13C9JLJ4 530 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 USP17L11C9JVI0 530 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 USP17L18D6R9N7 530 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 USP17L22D6RA61 530 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 USP17L17D6RBQ6 530 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 USP17L19D6RCP7 530 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 USP17L20D6RJB6 530 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 SGSM2O43147 1006 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 ORC4O43929 436 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 VCAM1P19320 739 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 GCLCP48506 637 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-205ENST00000409810 HAND2P61296 217 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 USP17L24Q0WX57 530 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 DGKZQ13574 1117 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 PKN2Q16513 984 aaKnown RBP12.92□□□□□ -0.34
CHMP3-205ENST00000409810 C17orf99Q6UX52 265 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 MFSD6Q6ZSS7 791 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 KIAA1211Q6ZU35 1233 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 TNS4Q8IZW8 715 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 ASCC2Q9H1I8 757 aaPredicted RBP12.92□□□□□ -0.34
CHMP3-205ENST00000409810 EMILIN3Q9NT22 766 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 NYAP2Q9P242 653 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 CPA4Q9UI42 421 aa12.92□□□□□ -0.34
CHMP3-205ENST00000409810 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHMP3-205ENST00000409810 PARP14Q460N5 1801 aa12.91□□□□□ -0.34
CHMP3-205ENST00000409810 RANBP6O60518 1105 aaKnown RBP12.91□□□□□ -0.34
CHMP3-205ENST00000409810 TTLL1O95922 423 aa12.91□□□□□ -0.34
CHMP3-205ENST00000409810 FGRP09769 529 aa12.91□□□□□ -0.34
CHMP3-205ENST00000409810 EEF2P13639 858 aaKnown RBP12.91□□□□□ -0.34
CHMP3-205ENST00000409810 TFAP4Q01664 338 aa12.91□□□□□ -0.34
CHMP3-205ENST00000409810 RRP12Q5JTH9 1297 aaKnown RBP12.91□□□□□ -0.34
CHMP3-205ENST00000409810 AKNAD1Q5T1N1 836 aa12.91□□□□□ -0.34
CHMP3-205ENST00000409810 SKAP1Q86WV1 359 aa12.91□□□□□ -0.34
CHMP3-205ENST00000409810 CLEC10AQ8IUN9 316 aa12.91□□□□□ -0.34
CHMP3-205ENST00000409810 NEDD1Q8NHV4 660 aa12.91□□□□□ -0.34
CHMP3-205ENST00000409810 STAG1Q8WVM7 1258 aa12.91□□□□□ -0.34
CHMP3-205ENST00000409810 VCPKMTQ9H867 229 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms