RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 SEC23AQ15436 765 aa15.31■□□□□ 0.04
LIMS2-203ENST00000409254 PRAMEF18Q5VWM3 479 aa15.31■□□□□ 0.04
LIMS2-203ENST00000409254 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.31■□□□□ 0.04
LIMS2-203ENST00000409254 ERO1BQ86YB8 467 aa15.31■□□□□ 0.04
LIMS2-203ENST00000409254 MKL1Q969V6 931 aa15.31■□□□□ 0.04
LIMS2-203ENST00000409254 MAP3K14Q99558 947 aa15.31■□□□□ 0.04
LIMS2-203ENST00000409254 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIMS2-203ENST00000409254 ARHGEF10LQ9HCE6 1279 aa15.31■□□□□ 0.04
LIMS2-203ENST00000409254 TNKSO95271 1327 aa15.31■□□□□ 0.04
LIMS2-203ENST00000409254 SPDYE5A6NIY4 337 aa15.3■□□□□ 0.04
LIMS2-203ENST00000409254 USP17L5A8MUK1 530 aa15.3■□□□□ 0.04
LIMS2-203ENST00000409254 SH2B2O14492 632 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-203ENST00000409254 INPP5BP32019 993 aa15.3■□□□□ 0.04
LIMS2-203ENST00000409254 PPATQ06203 517 aa15.3■□□□□ 0.04
LIMS2-203ENST00000409254 VGLL4Q14135 290 aa15.3■□□□□ 0.04
LIMS2-203ENST00000409254 PPP2R5BQ15173 497 aa15.3■□□□□ 0.04
LIMS2-203ENST00000409254 CYB5R4Q7L1T6 521 aa15.3■□□□□ 0.04
LIMS2-203ENST00000409254 ENAHQ8N8S7 591 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-203ENST00000409254 IGDCC4Q8TDY8 1250 aa15.3■□□□□ 0.04
LIMS2-203ENST00000409254 CEP95Q96GE4 821 aa15.3■□□□□ 0.04
LIMS2-203ENST00000409254 THSD7BQ9C0I4 1608 aa15.3■□□□□ 0.04
LIMS2-203ENST00000409254 SNCAIPQ9Y6H5 919 aa15.3■□□□□ 0.04
LIMS2-203ENST00000409254 TMEM88BA6NKF7 163 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 MPHOSPH10O00566 681 aaKnown RBP15.29■□□□□ 0.04
LIMS2-203ENST00000409254 IFIT3O14879 490 aaKnown RBP15.29■□□□□ 0.04
LIMS2-203ENST00000409254 GDF11O95390 407 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 ZBTB48P10074 688 aaPredicted RBP15.29■□□□□ 0.04
LIMS2-203ENST00000409254 TOP1P11387 765 aaKnown RBP15.29■□□□□ 0.04
LIMS2-203ENST00000409254 PTPRAP18433 802 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 GUCY1A2P33402 732 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 USP14P54578 494 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 TTLL12Q14166 644 aaPredicted RBP15.29■□□□□ 0.04
LIMS2-203ENST00000409254 WTAPQ15007 396 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 IFIT1BQ5T764 474 aaKnown RBP15.29■□□□□ 0.04
LIMS2-203ENST00000409254 CST9Q5W186 159 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 RCSD1Q6JBY9 416 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 GMCL1P1Q8NEA9 526 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 CHMP4CQ96CF2 233 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 KIAA1683Q9H0B3 1180 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 IL17RBQ9NRM6 502 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 CEP350Q5VT06 3117 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 RLFQ13129 1914 aa15.29■□□□□ 0.04
LIMS2-203ENST00000409254 C19orf81C9J6K1 198 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 DDAH1O94760 285 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 CALM1P0DP23 149 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 CALM2P0DP24 149 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 CALM3P0DP25 149 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 NEK4P51957 841 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 PPIL2Q13356 520 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 RRP1BQ14684 758 aaKnown RBP15.28■□□□□ 0.04
LIMS2-203ENST00000409254 SEPT2Q15019 361 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 TMEM67Q5HYA8 995 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 FAM47AQ5JRC9 791 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 SAPCD2Q86UD0 394 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 LPAR1Q92633 364 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 UPF3BQ9BZI7 483 aaKnown RBP15.28■□□□□ 0.04
LIMS2-203ENST00000409254 LY9Q9HBG7 655 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 CREBZFQ9NS37 354 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 PDRG1Q9NUG6 133 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 TMX2Q9Y320 296 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 TLL2Q9Y6L7 1015 aa15.28■□□□□ 0.04
LIMS2-203ENST00000409254 CXCL11O14625 94 aa15.27■□□□□ 0.04
LIMS2-203ENST00000409254 FGD1P98174 961 aa15.27■□□□□ 0.04
LIMS2-203ENST00000409254 RAB3GAP1Q15042 981 aa15.27■□□□□ 0.04
LIMS2-203ENST00000409254 ZNF280CQ8ND82 737 aa15.27■□□□□ 0.04
LIMS2-203ENST00000409254 ZKSCAN4Q969J2 545 aaPredicted RBP15.27■□□□□ 0.04
LIMS2-203ENST00000409254 C12orf42Q96LP6 360 aa15.27■□□□□ 0.04
LIMS2-203ENST00000409254 ZNF408Q9H9D4 720 aa15.27■□□□□ 0.04
LIMS2-203ENST00000409254 GOPCQ9HD26 462 aa15.27■□□□□ 0.04
LIMS2-203ENST00000409254 INCENPQ9NQS7 918 aa15.27■□□□□ 0.04
LIMS2-203ENST00000409254 STX8Q9UNK0 236 aa15.27■□□□□ 0.04
LIMS2-203ENST00000409254 KCNH4Q9UQ05 1017 aa15.27■□□□□ 0.04
LIMS2-203ENST00000409254 A0A0G2JMZ2 1700 aa15.26■□□□□ 0.03
LIMS2-203ENST00000409254 APLP1P51693 650 aa15.26■□□□□ 0.03
LIMS2-203ENST00000409254 SH3D19Q5HYK7 790 aa15.26■□□□□ 0.03
LIMS2-203ENST00000409254 STK11IPQ8N1F8 1099 aa15.26■□□□□ 0.03
LIMS2-203ENST00000409254 SNX21Q969T3 373 aa15.26■□□□□ 0.03
LIMS2-203ENST00000409254 ZNF274Q96GC6 653 aaPredicted RBP15.26■□□□□ 0.03
LIMS2-203ENST00000409254 GMCL1Q96IK5 515 aa15.26■□□□□ 0.03
LIMS2-203ENST00000409254 KAT14Q9H8E8 782 aa15.26■□□□□ 0.03
LIMS2-203ENST00000409254 SH2B1Q9NRF2 756 aaPredicted RBP15.26■□□□□ 0.03
LIMS2-203ENST00000409254 AFG3L2Q9Y4W6 797 aa15.26■□□□□ 0.03
LIMS2-203ENST00000409254 BAZ2BQ9UIF8 2168 aaKnown RBP15.25■□□□□ 0.03
LIMS2-203ENST00000409254 CCDC69A6NI79 296 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 USP17L10C9JJH3 530 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 SLURP2P0DP57 97 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 SNHG28P0DPA3 235 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 EEF2P13639 858 aaKnown RBP15.25■□□□□ 0.03
LIMS2-203ENST00000409254 HUNKP57058 714 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 JAG1P78504 1218 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 TOB2Q14106 344 aaPredicted RBP15.25■□□□□ 0.03
LIMS2-203ENST00000409254 APOA5Q6Q788 366 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 DLK2Q6UY11 383 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 Q6ZUG5 572 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 CATIPQ7Z7H3 387 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 PROCA1Q8NCQ7 364 aaPredicted RBP15.25■□□□□ 0.03
LIMS2-203ENST00000409254 PNMA1Q8ND90 353 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 DCAF4Q8WV16 495 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 SLC10A4Q96EP9 437 aa15.25■□□□□ 0.03
LIMS2-203ENST00000409254 ZSCAN31Q96LW9 406 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms