RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 TMOD2Q9NZR1 351 aa11.41□□□□□ -0.58
POLR1A-202ENST00000409024 RBM27Q9P2N5 1060 aaKnown RBP11.41□□□□□ -0.58
POLR1A-202ENST00000409024 ORC3Q9UBD5 711 aaPredicted RBP11.41□□□□□ -0.58
POLR1A-202ENST00000409024 SCN9AQ15858 1988 aa11.41□□□□□ -0.58
POLR1A-202ENST00000409024 CDK5RAP2Q96SN8 1893 aa11.4□□□□□ -0.58
POLR1A-202ENST00000409024 PSMD14O00487 310 aa11.4□□□□□ -0.58
POLR1A-202ENST00000409024 RASA1P20936 1047 aa11.4□□□□□ -0.58
POLR1A-202ENST00000409024 RBM5P52756 815 aaKnown RBP eCLIP11.4□□□□□ -0.58
POLR1A-202ENST00000409024 SSRP1Q08945 709 aaKnown RBP11.4□□□□□ -0.58
POLR1A-202ENST00000409024 NTRK3Q16288 839 aa11.4□□□□□ -0.58
POLR1A-202ENST00000409024 PAXIP1Q6ZW49 1069 aaPredicted RBP11.4□□□□□ -0.58
POLR1A-202ENST00000409024 PNMA8AQ86V59 439 aaPredicted RBP11.4□□□□□ -0.58
POLR1A-202ENST00000409024 METTL16Q86W50 562 aaKnown RBP11.4□□□□□ -0.58
POLR1A-202ENST00000409024 FAM177A1Q8N128 213 aaPredicted RBP11.4□□□□□ -0.58
POLR1A-202ENST00000409024 NKX2-3Q8TAU0 364 aa11.4□□□□□ -0.58
POLR1A-202ENST00000409024 CAPNS2Q96L46 248 aa11.4□□□□□ -0.58
POLR1A-202ENST00000409024 NCOA5Q9HCD5 579 aaKnown RBP11.4□□□□□ -0.58
POLR1A-202ENST00000409024 FAM217BQ9NTX9 383 aaPredicted RBP11.4□□□□□ -0.58
POLR1A-202ENST00000409024 PI4KBQ9UBF8 816 aa11.4□□□□□ -0.58
POLR1A-202ENST00000409024 SAP30BPQ9UHR5 308 aaKnown RBP11.4□□□□□ -0.58
POLR1A-202ENST00000409024 SERPINB13Q9UIV8 391 aa11.4□□□□□ -0.58
POLR1A-202ENST00000409024 HACL1Q9UJ83 578 aa11.4□□□□□ -0.58
POLR1A-202ENST00000409024 ATRNL1Q5VV63 1379 aa11.4□□□□□ -0.59
POLR1A-202ENST00000409024 MYH1P12882 1939 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 DICER1Q9UPY3 1922 aaKnown RBP11.39□□□□□ -0.59
POLR1A-202ENST00000409024 VPS37CA5D8V6 355 aaPredicted RBP11.39□□□□□ -0.59
POLR1A-202ENST00000409024 SPDYE2BA6NHP3 402 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 PRDM1O75626 825 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 FMNL1O95466 1100 aaPredicted RBP11.39□□□□□ -0.59
POLR1A-202ENST00000409024 SPDYE6P0CI01 402 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 FDPSP14324 419 aaKnown RBP11.39□□□□□ -0.59
POLR1A-202ENST00000409024 SMARCA1P28370 1054 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 CDC27P30260 824 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 ADD1P35611 737 aaKnown RBP11.39□□□□□ -0.59
POLR1A-202ENST00000409024 CXCL9Q07325 125 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 TROAPQ12815 778 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 DLGAP5Q15398 846 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 PRPF38BQ5VTL8 546 aaKnown RBP11.39□□□□□ -0.59
POLR1A-202ENST00000409024 MCTP1Q6DN14 999 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 MICU3Q86XE3 530 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 CTCFLQ8NI51 663 aaPredicted RBP11.39□□□□□ -0.59
POLR1A-202ENST00000409024 DPF2Q92785 391 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 LZTS2Q9BRK4 669 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 ZKSCAN3Q9BRR0 538 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 RNF26Q9BY78 433 aaPredicted RBP11.39□□□□□ -0.59
POLR1A-202ENST00000409024 KAT14Q9H8E8 782 aa11.39□□□□□ -0.59
POLR1A-202ENST00000409024 DDX4Q9NQI0 724 aaKnown RBP11.39□□□□□ -0.59
POLR1A-202ENST00000409024 ECM29Q5VYK3 1845 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 FZD9O00144 591 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 CA12O43570 354 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 MYO1BO43795 1136 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 TRAK2O60296 914 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 RAD17O75943 681 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 DEXIO95424 95 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 MBD3O95983 291 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 XBP1P17861 261 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 EIF6P56537 245 aaKnown RBP11.38□□□□□ -0.59
POLR1A-202ENST00000409024 PICALMQ13492 652 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 DGKZQ13574 1117 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 FAM47AQ5JRC9 791 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 MAP1SQ66K74 1059 aaPredicted RBP11.38□□□□□ -0.59
POLR1A-202ENST00000409024 RCSD1Q6JBY9 416 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 FAM83AQ86UY5 434 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 STK11IPQ8N1F8 1099 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 CRACR2BQ8N4Y2 399 aaPredicted RBP11.38□□□□□ -0.59
POLR1A-202ENST00000409024 FBXO18Q8NFZ0 1043 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 DDX11Q96FC9 970 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 DYNLL2Q96FJ2 89 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 C8orf76Q96K31 380 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 SCAND2PQ9GZW5 306 aaPredicted RBP11.38□□□□□ -0.59
POLR1A-202ENST00000409024 SENP2Q9HC62 589 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 LMBRD1Q9NUN5 540 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 TSKSQ9UJT2 592 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 CFAP45Q9UL16 551 aa11.38□□□□□ -0.59
POLR1A-202ENST00000409024 SCN4AP35499 1836 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 SMIM22K7EJ46 135 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 PRPF3O43395 683 aaKnown RBP11.37□□□□□ -0.59
POLR1A-202ENST00000409024 TOP1P11387 765 aaKnown RBP11.37□□□□□ -0.59
POLR1A-202ENST00000409024 NCLP19338 710 aaKnown RBP11.37□□□□□ -0.59
POLR1A-202ENST00000409024 EPHX2P34913 555 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 MAP2K2P36507 400 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 ZNF280AP59817 542 aaPredicted RBP11.37□□□□□ -0.59
POLR1A-202ENST00000409024 KRT85P78386 507 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 AKAP17AQ02040 695 aaKnown RBP11.37□□□□□ -0.59
POLR1A-202ENST00000409024 GRM1Q13255 1194 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 TRIM29Q14134 588 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 KLHL40Q2TBA0 621 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 CDC37L1Q7L3B6 337 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 BRAPQ7Z569 592 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 FAM151AQ8WW52 585 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 ZBED3Q96IU2 234 aaPredicted RBP11.37□□□□□ -0.59
POLR1A-202ENST00000409024 PRMT6Q96LA8 375 aaPredicted RBP11.37□□□□□ -0.59
POLR1A-202ENST00000409024 ZNF396Q96N95 335 aaPredicted RBP11.37□□□□□ -0.59
POLR1A-202ENST00000409024 ALG1Q9BT22 464 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 IL17RBQ9NRM6 502 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 FAM198AQ9UFP1 575 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 HERC5Q9UII4 1024 aaKnown RBP11.37□□□□□ -0.59
POLR1A-202ENST00000409024 SYNPO2Q9UMS6 1093 aa11.37□□□□□ -0.59
POLR1A-202ENST00000409024 ELP1O95163 1332 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 IGKV6D-41A0A0C4DH26 115 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms