RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 PCDHB13Q9Y5F0 798 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 CD2APQ9Y5K6 639 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 POLR2DO15514 142 aaKnown RBP11.89□□□□□ -0.51
LTBP1-204ENST00000407925 GPAA1O43292 621 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 POSTNQ15063 836 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 PHLDB3Q6NSJ2 640 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 CCDC105Q8IYK2 499 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 CCDC89Q8N998 374 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 RBSNQ9H1K0 784 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 WWC3Q9ULE0 1092 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 RIOK3O14730 519 aaKnown RBP11.89□□□□□ -0.51
LTBP1-204ENST00000407925 RIMBP2O15034 1052 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 KRT15P19012 456 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 WHAMMP3Q1A5X7 153 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 GNPTABQ3T906 1256 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 NCAPH2Q6IBW4 605 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 TRIM58Q8NG06 486 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 DSCC1Q9BVC3 393 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 ZNF518AQ6AHZ1 1483 aa11.89□□□□□ -0.51
LTBP1-204ENST00000407925 PRAG1Q86YV5 1406 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 ABCC1P33527 1531 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 ZNF131P52739 623 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 BRD3Q15059 726 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 DENND2CQ68D51 928 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 ARHGEF2Q92974 986 aaKnown RBP11.88□□□□□ -0.51
LTBP1-204ENST00000407925 RUNDC3BQ96NL0 473 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 RIC8AQ9NPQ8 531 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 ARPP21Q9UBL0 812 aaPredicted RBP11.88□□□□□ -0.51
LTBP1-204ENST00000407925 NPC1L1Q9UHC9 1359 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 SGSM2O43147 1006 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 ZNF202O95125 648 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 ZNF445P59923 1031 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 MYCT1Q8N699 235 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 TRIML1Q8N9V2 468 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 EYA1Q99502 592 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 AMFRQ9UKV5 643 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 FAN1Q9Y2M0 1017 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 NFE2L3Q9Y4A8 694 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 PRPF6O94906 941 aaKnown RBP11.88□□□□□ -0.51
LTBP1-204ENST00000407925 ZNF853P0CG23 659 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 STMN1P16949 149 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 CABP7Q86V35 215 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 REXO1Q8N1G1 1221 aaKnown RBP11.88□□□□□ -0.51
LTBP1-204ENST00000407925 XAGE2Q96GT9 111 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 ZFP91Q96JP5 570 aaPredicted RBP11.88□□□□□ -0.51
LTBP1-204ENST00000407925 GOLGA8QA0A0J9YX86 632 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 GOLGA8OA6NCC3 632 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 GOLGA8NF8WBI6 632 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 GNPATO15228 680 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 CD19P15391 556 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 HOXC9P31274 260 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 GABPAQ06546 454 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 TNFAIP1Q13829 316 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 HADHQ16836 314 aaKnown RBP11.88□□□□□ -0.51
LTBP1-204ENST00000407925 SPC25Q9HBM1 224 aa11.88□□□□□ -0.51
LTBP1-204ENST00000407925 TYW1Q9NV66 732 aaKnown RBP11.88□□□□□ -0.51
LTBP1-204ENST00000407925 CHMP2AO43633 222 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 MGEA5O60502 916 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 BUB1BO60566 1050 aaPredicted RBP11.87□□□□□ -0.51
LTBP1-204ENST00000407925 ATF7P17544 494 aaPredicted RBP11.87□□□□□ -0.51
LTBP1-204ENST00000407925 STAT1P42224 750 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 APBA1Q02410 837 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 BIRC2Q13490 618 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 ZNF790Q6PG37 636 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 PPP4R1Q8TF05 950 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 C8orf37Q96NL8 207 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 SBNO1A3KN83 1393 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 HOXA7P31268 230 aaPredicted RBP11.87□□□□□ -0.51
LTBP1-204ENST00000407925 KMT5BQ4FZB7 885 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 PPP1R2P3Q6NXS1 205 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 AS3MTQ9HBK9 375 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 SLC17A8Q8NDX2 589 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 METTL14Q9HCE5 456 aaKnown RBP11.87□□□□□ -0.51
LTBP1-204ENST00000407925 ZBTB7BO15156 539 aaPredicted RBP11.87□□□□□ -0.51
LTBP1-204ENST00000407925 RXRAP19793 462 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 TBX22Q9Y458 520 aa11.87□□□□□ -0.51
LTBP1-204ENST00000407925 WDR46O15213 610 aaKnown RBP11.86□□□□□ -0.51
LTBP1-204ENST00000407925 PCP11498 1178 aaKnown RBP11.86□□□□□ -0.51
LTBP1-204ENST00000407925 ARHGAP4P98171 946 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 AOC3Q16853 763 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 KRT40Q6A162 431 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 RNF10Q8N5U6 811 aaKnown RBP11.86□□□□□ -0.51
LTBP1-204ENST00000407925 GBP7Q8N8V2 638 aaPredicted RBP11.86□□□□□ -0.51
LTBP1-204ENST00000407925 MRPL44Q9H9J2 332 aaKnown RBP11.86□□□□□ -0.51
LTBP1-204ENST00000407925 MAGEF1Q9HAY2 307 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.86□□□□□ -0.51
LTBP1-204ENST00000407925 POLR2BP30876 1174 aaKnown RBP11.86□□□□□ -0.51
LTBP1-204ENST00000407925 ZBTB8OSQ8IWT0 167 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 Q9H521 79 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 ARMT1Q9H993 441 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 PPANQ9NQ55 473 aaKnown RBP11.86□□□□□ -0.51
LTBP1-204ENST00000407925 SSH2Q76I76 1423 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 GPATCH8Q9UKJ3 1502 aaKnown RBP11.86□□□□□ -0.51
LTBP1-204ENST00000407925 NR1I2O75469 434 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 NELFBQ8WX92 580 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 CARD6Q9BX69 1037 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 IFIH1Q9BYX4 1025 aaKnown RBP11.86□□□□□ -0.51
LTBP1-204ENST00000407925 SNX14Q9Y5W7 946 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 GCNT3O95395 438 aa11.86□□□□□ -0.51
LTBP1-204ENST00000407925 ALDH1B1P30837 517 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms