RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 TMOD4Q9NZQ9 345 aa12.42□□□□□ -0.42
FAM49A-202ENST00000406434 STAP2Q9UGK3 403 aa12.42□□□□□ -0.42
FAM49A-202ENST00000406434 AGTPBP1Q9UPW5 1226 aa12.42□□□□□ -0.42
FAM49A-202ENST00000406434 HPS5Q9UPZ3 1129 aa12.42□□□□□ -0.42
FAM49A-202ENST00000406434 BAZ2AQ9UIF9 1905 aaKnown RBP12.41□□□□□ -0.42
FAM49A-202ENST00000406434 M0R2C6 588 aa12.41□□□□□ -0.42
FAM49A-202ENST00000406434 BACE1P56817 501 aa12.41□□□□□ -0.42
FAM49A-202ENST00000406434 CAP1Q01518 475 aa12.41□□□□□ -0.42
FAM49A-202ENST00000406434 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
FAM49A-202ENST00000406434 ZYXQ15942 572 aaKnown RBP12.41□□□□□ -0.42
FAM49A-202ENST00000406434 CHD1LQ86WJ1 897 aa12.41□□□□□ -0.42
FAM49A-202ENST00000406434 PROCA1Q8NCQ7 364 aaPredicted RBP12.41□□□□□ -0.42
FAM49A-202ENST00000406434 SLC44A5Q8NCS7 719 aa12.41□□□□□ -0.42
FAM49A-202ENST00000406434 SMCR8Q8TEV9 937 aaPredicted RBP12.41□□□□□ -0.42
FAM49A-202ENST00000406434 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
FAM49A-202ENST00000406434 SEC62Q99442 399 aaKnown RBP12.41□□□□□ -0.42
FAM49A-202ENST00000406434 FEZ1Q99689 392 aa12.41□□□□□ -0.42
FAM49A-202ENST00000406434 ARHGAP39Q9C0H5 1083 aa12.41□□□□□ -0.42
FAM49A-202ENST00000406434 NAV1Q8NEY1 1877 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 SALL3Q9BXA9 1300 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 C19orf81C9J6K1 198 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 SMIM22K7EJ46 135 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 GPAA1O43292 621 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 FMNL1O95466 1100 aaPredicted RBP12.4□□□□□ -0.42
FAM49A-202ENST00000406434 OSBPP22059 807 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 PSMC4P43686 418 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 LACTBP83111 547 aaPredicted RBP12.4□□□□□ -0.42
FAM49A-202ENST00000406434 GABPAQ06546 454 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 PABPC4Q13310 644 aaKnown RBP eCLIP12.4□□□□□ -0.42
FAM49A-202ENST00000406434 SEPT2Q15019 361 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 SH3D19Q5HYK7 790 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 C12orf60Q5U649 245 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 CTR9Q6PD62 1173 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 RILPL2Q969X0 211 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 PNMA3Q9UL41 463 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 SLC45A1Q9Y2W3 748 aa12.4□□□□□ -0.42
FAM49A-202ENST00000406434 PTPRFP10586 1907 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 GSG1L2A8MUP6 293 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 PATL2C9JE40 543 aaKnown RBP12.39□□□□□ -0.43
FAM49A-202ENST00000406434 MAP3K13O43283 966 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 TDO2P48775 406 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 CDK8P49336 464 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 NUCB1Q02818 461 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 USP17L2Q6R6M4 530 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 ANKRD13CQ8N6S4 541 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 ACER1Q8TDN7 264 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 EVI5LQ96CN4 794 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 SWAP70Q9UH65 585 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 PTPN22Q9Y2R2 807 aa12.39□□□□□ -0.43
FAM49A-202ENST00000406434 GNAT2P19087 354 aa12.38□□□□□ -0.43
FAM49A-202ENST00000406434 IRX3P78415 501 aaPredicted RBP12.38□□□□□ -0.43
FAM49A-202ENST00000406434 ZMYM1Q5SVZ6 1142 aa12.38□□□□□ -0.43
FAM49A-202ENST00000406434 ASCC2Q9H1I8 757 aaPredicted RBP12.38□□□□□ -0.43
FAM49A-202ENST00000406434 EMILIN3Q9NT22 766 aa12.38□□□□□ -0.43
FAM49A-202ENST00000406434 ADGRA2Q96PE1 1338 aa12.38□□□□□ -0.43
FAM49A-202ENST00000406434 BCRP11274 1271 aa12.37□□□□□ -0.43
FAM49A-202ENST00000406434 AKR1B1P15121 316 aa12.37□□□□□ -0.43
FAM49A-202ENST00000406434 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
FAM49A-202ENST00000406434 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
FAM49A-202ENST00000406434 SOX10P56693 466 aa12.37□□□□□ -0.43
FAM49A-202ENST00000406434 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
FAM49A-202ENST00000406434 PLEKHM2Q8IWE5 1019 aa12.37□□□□□ -0.43
FAM49A-202ENST00000406434 IFNL3Q8IZI9 196 aa12.37□□□□□ -0.43
FAM49A-202ENST00000406434 P2RX7Q99572 595 aaKnown RBP12.37□□□□□ -0.43
FAM49A-202ENST00000406434 MKNK2Q9HBH9 465 aa12.37□□□□□ -0.43
FAM49A-202ENST00000406434 ARPP21Q9UBL0 812 aaPredicted RBP12.37□□□□□ -0.43
FAM49A-202ENST00000406434 HOXD10P28358 340 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 CTGFP29279 349 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 FCGRTP55899 365 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 ATP2B2Q01814 1243 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 SBK1Q52WX2 424 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 GIMAP6Q6P9H5 292 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 TMEM179Q6ZVK1 233 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 C16orf86Q6ZW13 317 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 TRIM47Q96LD4 638 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 CCDC17Q96LX7 622 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 NACAP1Q9BZK3 213 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 PTCH2Q9Y6C5 1203 aa12.36□□□□□ -0.43
FAM49A-202ENST00000406434 ZSWIM8A7E2V4 1837 aa12.35□□□□□ -0.43
FAM49A-202ENST00000406434 MYCP01106 439 aaPredicted RBP12.35□□□□□ -0.43
FAM49A-202ENST00000406434 HOXA7P31268 230 aaPredicted RBP12.35□□□□□ -0.43
FAM49A-202ENST00000406434 GCLCP48506 637 aaPredicted RBP12.35□□□□□ -0.43
FAM49A-202ENST00000406434 PSEN1P49768 467 aa12.35□□□□□ -0.43
FAM49A-202ENST00000406434 USP14P54578 494 aa12.35□□□□□ -0.43
FAM49A-202ENST00000406434 KIAA1683Q9H0B3 1180 aa12.35□□□□□ -0.43
FAM49A-202ENST00000406434 NAPBQ9H115 298 aa12.35□□□□□ -0.43
FAM49A-202ENST00000406434 EPB41L4AQ9HCS5 686 aaPredicted RBP12.35□□□□□ -0.43
FAM49A-202ENST00000406434 MYH8P13535 1937 aa12.35□□□□□ -0.43
FAM49A-202ENST00000406434 DDX60LQ5H9U9 1706 aaKnown RBP12.34□□□□□ -0.43
FAM49A-202ENST00000406434 A0A1W2PRG0 241 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 USP17L15C9J2P7 530 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 USP17L13C9JLJ4 530 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 USP17L11C9JVI0 530 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 USP17L18D6R9N7 530 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 USP17L22D6RA61 530 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 USP17L17D6RBQ6 530 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 USP17L19D6RCP7 530 aa12.34□□□□□ -0.43
FAM49A-202ENST00000406434 USP17L20D6RJB6 530 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms