RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 NMT2O60551 498 aa11.29□□□□□ -0.6
MSH2-202ENST00000406134 CYP7A1P22680 504 aa11.29□□□□□ -0.6
MSH2-202ENST00000406134 E2F4Q16254 413 aa11.29□□□□□ -0.6
MSH2-202ENST00000406134 ERCC6LQ2NKX8 1250 aa11.29□□□□□ -0.6
MSH2-202ENST00000406134 LINC00116Q8NCU8 138 aa11.29□□□□□ -0.6
MSH2-202ENST00000406134 FAM84BQ96KN1 310 aaPredicted RBP11.29□□□□□ -0.6
MSH2-202ENST00000406134 CABP5Q9NP86 173 aa11.29□□□□□ -0.6
MSH2-202ENST00000406134 AATFQ9NY61 560 aaKnown RBP eCLIP11.29□□□□□ -0.6
MSH2-202ENST00000406134 NIP7Q9Y221 180 aaKnown RBP eCLIP11.29□□□□□ -0.6
MSH2-202ENST00000406134 A0A1B0GTH6 734 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 ETF1P62495 437 aaKnown RBP11.28□□□□□ -0.6
MSH2-202ENST00000406134 ZNF397Q8NF99 534 aaPredicted RBP11.28□□□□□ -0.6
MSH2-202ENST00000406134 ZSCAN10Q96SZ4 725 aaPredicted RBP11.28□□□□□ -0.6
MSH2-202ENST00000406134 LTBP4Q8N2S1 1624 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 XDHP47989 1333 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 TRIM29Q14134 588 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 SLC35G1Q2M3R5 365 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 CDKAL1Q5VV42 579 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 CPLX2Q6PUV4 134 aaKnown RBP11.28□□□□□ -0.6
MSH2-202ENST00000406134 AMIGO3Q86WK7 504 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 WDR24Q96S15 920 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 NFE2L3Q9Y4A8 694 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 TEX33O43247 280 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 PRPF3O43395 683 aaKnown RBP11.28□□□□□ -0.6
MSH2-202ENST00000406134 SF3B3Q15393 1217 aaKnown RBP11.28□□□□□ -0.6
MSH2-202ENST00000406134 SRBD1Q8N5C6 995 aaKnown RBP11.28□□□□□ -0.6
MSH2-202ENST00000406134 WASF1Q92558 559 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 CELF1Q92879 486 aaKnown RBP11.28□□□□□ -0.6
MSH2-202ENST00000406134 BRIP1Q9BX63 1249 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 ST7Q9NRC1 585 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 MINPP1Q9UNW1 487 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.28□□□□□ -0.6
MSH2-202ENST00000406134 FHOD1Q9Y613 1164 aa11.28□□□□□ -0.6
MSH2-202ENST00000406134 PPP1R3GB7ZBB8 358 aa11.27□□□□□ -0.6
MSH2-202ENST00000406134 MTF1Q14872 753 aa11.27□□□□□ -0.6
MSH2-202ENST00000406134 CFAP100Q494V2 611 aa11.27□□□□□ -0.6
MSH2-202ENST00000406134 PTF1AQ7RTS3 328 aa11.27□□□□□ -0.6
MSH2-202ENST00000406134 NSUN4Q96CB9 384 aaKnown RBP11.27□□□□□ -0.6
MSH2-202ENST00000406134 MAGEB6P1A0A0J9YX57 407 aa11.27□□□□□ -0.61
MSH2-202ENST00000406134 RCSD1Q6JBY9 416 aa11.27□□□□□ -0.61
MSH2-202ENST00000406134 PAGE5Q96GU1 130 aa11.27□□□□□ -0.61
MSH2-202ENST00000406134 PPP2R2CQ9Y2T4 447 aa11.27□□□□□ -0.61
MSH2-202ENST00000406134 KIF2AO00139 706 aaPredicted RBP11.27□□□□□ -0.61
MSH2-202ENST00000406134 ZRANB2O95218 330 aaKnown RBP eCLIP11.27□□□□□ -0.61
MSH2-202ENST00000406134 SERPINC1P01008 464 aa11.27□□□□□ -0.61
MSH2-202ENST00000406134 SLFN14P0C7P3 912 aa11.27□□□□□ -0.61
MSH2-202ENST00000406134 PLCD1P51178 756 aa11.27□□□□□ -0.61
MSH2-202ENST00000406134 ADKP55263 362 aaKnown RBP11.27□□□□□ -0.61
MSH2-202ENST00000406134 GNL2Q13823 731 aaKnown RBP11.27□□□□□ -0.61
MSH2-202ENST00000406134 FBXO33Q7Z6M2 555 aa11.27□□□□□ -0.61
MSH2-202ENST00000406134 FCHSD1Q86WN1 690 aa11.27□□□□□ -0.61
MSH2-202ENST00000406134 NUP133Q8WUM0 1156 aa11.27□□□□□ -0.61
MSH2-202ENST00000406134 SYMPKQ92797 1274 aaKnown RBP11.27□□□□□ -0.61
MSH2-202ENST00000406134 BSDC1Q9NW68 430 aaPredicted RBP11.27□□□□□ -0.61
MSH2-202ENST00000406134 LRP2BPQ9P2M1 347 aa11.27□□□□□ -0.61
MSH2-202ENST00000406134 M0R2N6 131 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 TADA3O75528 432 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 IGHMBP2P38935 993 aaKnown RBP11.26□□□□□ -0.61
MSH2-202ENST00000406134 PDXDC2PQ6P474 469 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 TMTC3Q6ZXV5 915 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 PDILTQ8N807 584 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 C4orf32Q8N8J7 132 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 TRIML1Q8N9V2 468 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 LRRC15Q8TF66 581 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 MRPL44Q9H9J2 332 aaKnown RBP11.26□□□□□ -0.61
MSH2-202ENST00000406134 THSD7AQ9UPZ6 1657 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 SPATA31A5Q5VU36 1347 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 SPATA31A7Q8IWB4 1347 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 MINDY4BA8MYZ0 360 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 SMYD4Q8IYR2 804 aaPredicted RBP11.26□□□□□ -0.61
MSH2-202ENST00000406134 MLKLQ8NB16 471 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
MSH2-202ENST00000406134 NACAP1Q9BZK3 213 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 MKRN1Q9UHC7 482 aaKnown RBP11.26□□□□□ -0.61
MSH2-202ENST00000406134 CYP2D6P10635 497 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 FECHP22830 423 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 CLCN6P51797 869 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 TRIM22Q8IYM9 498 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 TMTC2Q8N394 836 aa11.26□□□□□ -0.61
MSH2-202ENST00000406134 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
MSH2-202ENST00000406134 FAM205AQ6ZU69 1335 aa11.25□□□□□ -0.61
MSH2-202ENST00000406134 RNF225M0QZC1 329 aaPredicted RBP11.25□□□□□ -0.61
MSH2-202ENST00000406134 CBFA2T2O43439 604 aa11.25□□□□□ -0.61
MSH2-202ENST00000406134 IGSF3O75054 1194 aa11.25□□□□□ -0.61
MSH2-202ENST00000406134 KCNQ4P56696 695 aa11.25□□□□□ -0.61
MSH2-202ENST00000406134 ATP2C1P98194 919 aaPredicted RBP11.25□□□□□ -0.61
MSH2-202ENST00000406134 DNAI1Q9UI46 699 aa11.25□□□□□ -0.61
MSH2-202ENST00000406134 TOP1P11387 765 aaKnown RBP11.25□□□□□ -0.61
MSH2-202ENST00000406134 UBE4AQ14139 1066 aa11.25□□□□□ -0.61
MSH2-202ENST00000406134 SPECC1LQ69YQ0 1117 aa11.25□□□□□ -0.61
MSH2-202ENST00000406134 TXNRD3Q86VQ6 643 aa11.25□□□□□ -0.61
MSH2-202ENST00000406134 RNF41Q9H4P4 317 aaPredicted RBP11.25□□□□□ -0.61
MSH2-202ENST00000406134 ADD3Q9UEY8 706 aaKnown RBP11.25□□□□□ -0.61
MSH2-202ENST00000406134 ADAMTSL1Q8N6G6 1762 aa11.25□□□□□ -0.61
MSH2-202ENST00000406134 ARHGAP6O43182 974 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 TPM4P67936 248 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 MECOMQ03112 1051 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 ZRSR1Q15695 479 aaKnown RBP11.24□□□□□ -0.61
MSH2-202ENST00000406134 TBC1D9BQ66K14 1250 aa11.24□□□□□ -0.61
MSH2-202ENST00000406134 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms