RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 EMILIN3Q9NT22 766 aa21.84■■□□□ 1.09
HDAC11-204ENST00000404040 SAP30BPQ9UHR5 308 aaKnown RBP21.84■■□□□ 1.09
HDAC11-204ENST00000404040 IGSF3O75054 1194 aa21.83■■□□□ 1.09
HDAC11-204ENST00000404040 HLA-DOAP06340 250 aa21.83■■□□□ 1.09
HDAC11-204ENST00000404040 CCND3P30281 292 aaPredicted RBP21.83■■□□□ 1.09
HDAC11-204ENST00000404040 CCDC158Q5M9N0 1113 aa21.83■■□□□ 1.09
HDAC11-204ENST00000404040 LHX8Q68G74 356 aa21.83■■□□□ 1.09
HDAC11-204ENST00000404040 PLEKHH3Q7Z736 793 aa21.83■■□□□ 1.09
HDAC11-204ENST00000404040 CCAR1Q8IX12 1150 aaKnown RBP21.83■■□□□ 1.09
HDAC11-204ENST00000404040 RPAP2Q8IXW5 612 aaPredicted RBP21.83■■□□□ 1.09
HDAC11-204ENST00000404040 A0A0G2JMZ2 1700 aa21.83■■□□□ 1.08
HDAC11-204ENST00000404040 ATP8B2P98198 1209 aa21.82■■□□□ 1.08
HDAC11-204ENST00000404040 USP17L2Q6R6M4 530 aa21.82■■□□□ 1.08
HDAC11-204ENST00000404040 ZNF512BQ96KM6 892 aaPredicted RBP21.82■■□□□ 1.08
HDAC11-204ENST00000404040 PIH1D3Q9NQM4 214 aaKnown RBP21.82■■□□□ 1.08
HDAC11-204ENST00000404040 STXBP5LQ9Y2K9 1186 aa21.82■■□□□ 1.08
HDAC11-204ENST00000404040 PARP14Q460N5 1801 aa21.81■■□□□ 1.08
HDAC11-204ENST00000404040 GH2P01242 217 aa21.81■■□□□ 1.08
HDAC11-204ENST00000404040 POLA2Q14181 598 aa21.81■■□□□ 1.08
HDAC11-204ENST00000404040 LRRC26Q2I0M4 334 aa21.81■■□□□ 1.08
HDAC11-204ENST00000404040 C12orf42Q96LP6 360 aa21.81■■□□□ 1.08
HDAC11-204ENST00000404040 CRBNQ96SW2 442 aa21.81■■□□□ 1.08
HDAC11-204ENST00000404040 HMMRO75330 724 aa21.8■■□□□ 1.08
HDAC11-204ENST00000404040 ZAP70P43403 619 aa21.8■■□□□ 1.08
HDAC11-204ENST00000404040 DYNLL1P63167 89 aaKnown RBP21.8■■□□□ 1.08
HDAC11-204ENST00000404040 MAP2K5Q13163 448 aa21.8■■□□□ 1.08
HDAC11-204ENST00000404040 FEZ1Q99689 392 aa21.8■■□□□ 1.08
HDAC11-204ENST00000404040 C1orf115Q9H7X2 142 aa21.8■■□□□ 1.08
HDAC11-204ENST00000404040 MTMR10Q9NXD2 777 aa21.8■■□□□ 1.08
HDAC11-204ENST00000404040 RABGAP1Q9Y3P9 1069 aa21.8■■□□□ 1.08
HDAC11-204ENST00000404040 CNMDO75829 334 aa21.79■■□□□ 1.08
HDAC11-204ENST00000404040 OS9Q13438 667 aaPredicted RBP21.79■■□□□ 1.08
HDAC11-204ENST00000404040 CEP85Q6P2H3 762 aa21.79■■□□□ 1.08
HDAC11-204ENST00000404040 SSH3Q8TE77 659 aa21.79■■□□□ 1.08
HDAC11-204ENST00000404040 CWC22Q9HCG8 908 aaKnown RBP21.79■■□□□ 1.08
HDAC11-204ENST00000404040 CYP7A1P22680 504 aa21.78■■□□□ 1.08
HDAC11-204ENST00000404040 CCNA1P78396 465 aa21.78■■□□□ 1.08
HDAC11-204ENST00000404040 ZYXQ15942 572 aaKnown RBP21.78■■□□□ 1.08
HDAC11-204ENST00000404040 TATDN1Q6P1N9 297 aa21.78■■□□□ 1.08
HDAC11-204ENST00000404040 DBNLQ9UJU6 430 aaKnown RBP21.78■■□□□ 1.08
HDAC11-204ENST00000404040 ZNFX1Q9P2E3 1918 aaKnown RBP21.78■■□□□ 1.08
HDAC11-204ENST00000404040 USP17L15C9J2P7 530 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 USP17L13C9JLJ4 530 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 USP17L11C9JVI0 530 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 USP17L18D6R9N7 530 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 USP17L22D6RA61 530 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 USP17L17D6RBQ6 530 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 USP17L19D6RCP7 530 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 USP17L20D6RJB6 530 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 GLRX3O76003 335 aaKnown RBP21.77■■□□□ 1.08
HDAC11-204ENST00000404040 USP17L24Q0WX57 530 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 EHD4Q9H223 541 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 TLR7Q9NYK1 1049 aaKnown RBP21.77■■□□□ 1.08
HDAC11-204ENST00000404040 FLRT1Q9NZU1 646 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 SERPINB13Q9UIV8 391 aa21.77■■□□□ 1.08
HDAC11-204ENST00000404040 VCAM1P19320 739 aa21.76■■□□□ 1.07
HDAC11-204ENST00000404040 MDM2Q00987 491 aaPredicted RBP21.76■■□□□ 1.07
HDAC11-204ENST00000404040 MFSD14CQ5VZR4 134 aa21.76■■□□□ 1.07
HDAC11-204ENST00000404040 CERS3Q8IU89 383 aa21.76■■□□□ 1.07
HDAC11-204ENST00000404040 MIGA1Q8NAN2 632 aa21.76■■□□□ 1.07
HDAC11-204ENST00000404040 KIAA1683Q9H0B3 1180 aa21.76■■□□□ 1.07
HDAC11-204ENST00000404040 NDUFB9Q9Y6M9 179 aa21.76■■□□□ 1.07
HDAC11-204ENST00000404040 SLC15A5A6NIM6 579 aa21.75■■□□□ 1.07
HDAC11-204ENST00000404040 SURF6O75683 361 aaKnown RBP21.75■■□□□ 1.07
HDAC11-204ENST00000404040 IDH1O75874 414 aaKnown RBP21.75■■□□□ 1.07
HDAC11-204ENST00000404040 USP5P45974 858 aa21.75■■□□□ 1.07
HDAC11-204ENST00000404040 USP14P54578 494 aa21.75■■□□□ 1.07
HDAC11-204ENST00000404040 LBX2Q6XYB7 198 aa21.75■■□□□ 1.07
HDAC11-204ENST00000404040 CATSPERGQ6ZRH7 1159 aa21.75■■□□□ 1.07
HDAC11-204ENST00000404040 EDC3Q96F86 508 aaKnown RBP21.75■■□□□ 1.07
HDAC11-204ENST00000404040 COL11A1P12107 1806 aaPredicted RBP21.75■■□□□ 1.07
HDAC11-204ENST00000404040 HOXC6P09630 235 aa21.74■■□□□ 1.07
HDAC11-204ENST00000404040 PTPREP23469 700 aa21.74■■□□□ 1.07
HDAC11-204ENST00000404040 GRB14Q14449 540 aa21.74■■□□□ 1.07
HDAC11-204ENST00000404040 RAB3GAP1Q15042 981 aa21.74■■□□□ 1.07
HDAC11-204ENST00000404040 WDR78Q5VTH9 848 aa21.74■■□□□ 1.07
HDAC11-204ENST00000404040 DDX20Q9UHI6 824 aaKnown RBP21.74■■□□□ 1.07
HDAC11-204ENST00000404040 BAZ2AQ9UIF9 1905 aaKnown RBP21.74■■□□□ 1.07
HDAC11-204ENST00000404040 PLXNA1Q9UIW2 1896 aa21.73■■□□□ 1.07
HDAC11-204ENST00000404040 MSCO60682 206 aa21.73■■□□□ 1.07
HDAC11-204ENST00000404040 NEFLP07196 543 aa21.73■■□□□ 1.07
HDAC11-204ENST00000404040 ABCB5Q2M3G0 1257 aa21.73■■□□□ 1.07
HDAC11-204ENST00000404040 HSP90AB4PQ58FF6 505 aa21.73■■□□□ 1.07
HDAC11-204ENST00000404040 MAGEB6Q8N7X4 407 aa21.73■■□□□ 1.07
HDAC11-204ENST00000404040 ACER1Q8TDN7 264 aa21.73■■□□□ 1.07
HDAC11-204ENST00000404040 BTBD7Q9P203 1132 aa21.73■■□□□ 1.07
HDAC11-204ENST00000404040 NOP58Q9Y2X3 529 aaKnown RBP21.73■■□□□ 1.07
HDAC11-204ENST00000404040 SMCHD1A6NHR9 2005 aa21.72■■□□□ 1.07
HDAC11-204ENST00000404040 SPDYE16A6NNV3 312 aaPredicted RBP21.72■■□□□ 1.07
HDAC11-204ENST00000404040 CERKLQ49MI3 558 aaPredicted RBP21.72■■□□□ 1.07
HDAC11-204ENST00000404040 LPAR1Q92633 364 aa21.72■■□□□ 1.07
HDAC11-204ENST00000404040 SENP6Q9GZR1 1112 aaPredicted RBP21.72■■□□□ 1.07
HDAC11-204ENST00000404040 IVNS1ABPQ9Y6Y0 642 aa21.72■■□□□ 1.07
HDAC11-204ENST00000404040 MYH7P12883 1935 aa21.72■■□□□ 1.07
HDAC11-204ENST00000404040 DNM1LO00429 736 aa21.71■■□□□ 1.07
HDAC11-204ENST00000404040 SHMT1P34896 483 aa21.71■■□□□ 1.07
HDAC11-204ENST00000404040 TMED8Q6PL24 325 aaPredicted RBP21.71■■□□□ 1.07
HDAC11-204ENST00000404040 TTC6Q86TZ1 520 aa21.71■■□□□ 1.07
HDAC11-204ENST00000404040 EXOC6Q8TAG9 804 aa21.71■■□□□ 1.07
HDAC11-204ENST00000404040 EAF2Q96CJ1 260 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms