RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 HINFPQ9BQA5 517 aa13.63□□□□□ -0.23
RBM39-206ENST00000403542 FOXP1Q9H334 677 aaPredicted RBP13.63□□□□□ -0.23
RBM39-206ENST00000403542 ABCC12Q96J65 1359 aa13.62□□□□□ -0.23
RBM39-206ENST00000403542 RNF225M0QZC1 329 aaPredicted RBP13.62□□□□□ -0.23
RBM39-206ENST00000403542 CCDC175P0C221 793 aa13.62□□□□□ -0.23
RBM39-206ENST00000403542 MCM7P33993 719 aa13.62□□□□□ -0.23
RBM39-206ENST00000403542 SARSP49591 514 aaKnown RBP13.62□□□□□ -0.23
RBM39-206ENST00000403542 KIF4BQ2VIQ3 1234 aa13.62□□□□□ -0.23
RBM39-206ENST00000403542 TICAM2Q86XR7 235 aa13.62□□□□□ -0.23
RBM39-206ENST00000403542 SOS2Q07890 1332 aaPredicted RBP13.62□□□□□ -0.23
RBM39-206ENST00000403542 LMTK3Q96Q04 1460 aa13.62□□□□□ -0.23
RBM39-206ENST00000403542 FGFR2P21802 821 aa13.62□□□□□ -0.23
RBM39-206ENST00000403542 HNRNPH2P55795 449 aaKnown RBP13.62□□□□□ -0.23
RBM39-206ENST00000403542 KCNQ4P56696 695 aa13.62□□□□□ -0.23
RBM39-206ENST00000403542 SMC1AQ14683 1233 aaKnown RBP13.62□□□□□ -0.23
RBM39-206ENST00000403542 CCDC24Q8N4L8 307 aa13.62□□□□□ -0.23
RBM39-206ENST00000403542 ENAHQ8N8S7 591 aaPredicted RBP13.62□□□□□ -0.23
RBM39-206ENST00000403542 ARFGAP3Q9NP61 516 aa13.62□□□□□ -0.23
RBM39-206ENST00000403542 TAB2Q9NYJ8 693 aa13.62□□□□□ -0.23
RBM39-206ENST00000403542 COL5A2P05997 1499 aaPredicted RBP13.62□□□□□ -0.23
RBM39-206ENST00000403542 PHACTR2O75167 634 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 DACH1Q9UI36 760 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 PTGDRQ13258 359 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 IFIT1BQ5T764 474 aaKnown RBP13.61□□□□□ -0.23
RBM39-206ENST00000403542 RRAGBQ5VZM2 374 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 BICDL1Q6ZP65 573 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 PIK3AP1Q6ZUJ8 805 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 TRIM10Q9UDY6 481 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 ADGRG1Q9Y653 693 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 CDHR2Q9BYE9 1310 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 N4BP3O15049 544 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 RASGRP4Q8TDF6 673 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 STAG1Q8WVM7 1258 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 SRRTQ9BXP5 876 aaKnown RBP13.61□□□□□ -0.23
RBM39-206ENST00000403542 LAMB4A4D0S4 1761 aa13.61□□□□□ -0.23
RBM39-206ENST00000403542 A0A1B0GTH6 734 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 CCDC196A0A1B0GTZ2 297 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 KRT2P35908 639 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 CHMP4BP1P59074 171 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 CHRNDQ07001 517 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 PKN1Q16512 942 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 SKIDA1Q1XH10 827 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 NUP88Q99567 741 aaPredicted RBP13.6□□□□□ -0.23
RBM39-206ENST00000403542 SLF1Q9BQI6 1058 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 CCDC66A2RUB6 948 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 KIF5CO60282 957 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 CUL4BQ13620 913 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 ALX1Q15699 326 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 SLC35F6Q8N357 371 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 GOLGA1Q92805 767 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 CEP131Q9UPN4 1083 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 MROH5Q6ZUA9 1318 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
RBM39-206ENST00000403542 MAGEB6P1A0A0J9YX57 407 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 ENC1O14682 589 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 N4BP1O75113 896 aaKnown RBP13.59□□□□□ -0.23
RBM39-206ENST00000403542 GYPCP04921 128 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 CYP2C19P33261 490 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 DHX8Q14562 1220 aaKnown RBP13.59□□□□□ -0.23
RBM39-206ENST00000403542 LONRF2Q1L5Z9 754 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 APTXQ7Z2E3 356 aaKnown RBP13.59□□□□□ -0.23
RBM39-206ENST00000403542 GPR161Q8N6U8 529 aaKnown RBP13.59□□□□□ -0.23
RBM39-206ENST00000403542 RASSF8Q8NHQ8 419 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 ESR2Q92731 530 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 ZNF512BQ96KM6 892 aaPredicted RBP13.59□□□□□ -0.23
RBM39-206ENST00000403542 GDAP1L1Q96MZ0 367 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 PNKPQ96T60 521 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 NIP7Q9Y221 180 aaKnown RBP eCLIP13.59□□□□□ -0.23
RBM39-206ENST00000403542 GDAQ9Y2T3 454 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 ADAMTSL3P82987 1691 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 PKD1L3Q7Z443 1732 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 SPEF2Q9C093 1822 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 H3BQF6 201 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 IGHMBP2P38935 993 aaKnown RBP13.59□□□□□ -0.23
RBM39-206ENST00000403542 NT5DC1Q5TFE4 455 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 SPATA1Q5VX52 437 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 SLAIN2Q9P270 581 aa13.59□□□□□ -0.23
RBM39-206ENST00000403542 TRIM49BA6NDI0 452 aa13.58□□□□□ -0.23
RBM39-206ENST00000403542 LMAN1P49257 510 aa13.58□□□□□ -0.23
RBM39-206ENST00000403542 CATIPQ7Z7H3 387 aa13.58□□□□□ -0.23
RBM39-206ENST00000403542 FCHSD1Q86WN1 690 aa13.58□□□□□ -0.23
RBM39-206ENST00000403542 ZSCAN10Q96SZ4 725 aaPredicted RBP13.58□□□□□ -0.23
RBM39-206ENST00000403542 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.58□□□□□ -0.23
RBM39-206ENST00000403542 ADD3Q9UEY8 706 aaKnown RBP13.58□□□□□ -0.23
RBM39-206ENST00000403542 TNS2Q63HR2 1409 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 PP2D1A8MPX8 630 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 PPP1R3GB7ZBB8 358 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 USP17L12C9JPN9 530 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 USP17L21D6R901 530 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 TUBB4AP04350 444 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 CYP2D6P10635 497 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 KRT31Q15323 416 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 TTC38Q5R3I4 469 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 NCAPH2Q6IBW4 605 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 RSRC2Q7L4I2 434 aaKnown RBP13.58□□□□□ -0.24
RBM39-206ENST00000403542 GPKOWQ92917 476 aaPredicted RBP eCLIP13.58□□□□□ -0.246e-7■■□□□ 12.1
RBM39-206ENST00000403542 PDE11AQ9HCR9 933 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 GUCA1BQ9UMX6 200 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 MYH7P12883 1935 aa13.58□□□□□ -0.24
RBM39-206ENST00000403542 ATRNO75882 1429 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms