RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TAB3Q8N5C8 712 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 RIN3Q8TB24 985 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 RNPC3Q96LT9 517 aaKnown RBP5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 LGR4Q9BXB1 951 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 SEMA6CQ9H3T2 930 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 ACSS3Q9H6R3 686 aa5.79□□□□□ -1.48
HMGB1P17-201ENST00000403495 RGS13O14921 159 aa5.78□□□□□ -1.48
HMGB1P17-201ENST00000403495 APBA3O96018 575 aa5.78□□□□□ -1.48
HMGB1P17-201ENST00000403495 CST3P01034 146 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P17-201ENST00000403495 MBTPS1Q14703 1052 aa5.78□□□□□ -1.48
HMGB1P17-201ENST00000403495 MTERF2Q49AM1 385 aa5.78□□□□□ -1.48
HMGB1P17-201ENST00000403495 SH3TC2Q8TF17 1288 aa5.78□□□□□ -1.48
HMGB1P17-201ENST00000403495 MIPEPQ99797 713 aa5.78□□□□□ -1.48
HMGB1P17-201ENST00000403495 FOXQ1Q9C009 403 aa5.78□□□□□ -1.48
HMGB1P17-201ENST00000403495 CCDC113Q9H0I3 377 aa5.78□□□□□ -1.48
HMGB1P17-201ENST00000403495 PCOLCE2Q9UKZ9 415 aa5.78□□□□□ -1.48
HMGB1P17-201ENST00000403495 BMP3P12645 472 aa5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 NRG1Q02297 640 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 IFRD2Q12894 506 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 INTS3Q68E01 1043 aaKnown RBP5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 Q6ZS46 218 aa5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 CDH24Q86UP0 819 aa5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 ARMC10Q8N2F6 343 aa5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 PPP1R13LQ8WUF5 828 aa5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 UTP4Q969X6 686 aaKnown RBP5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 FAM46AQ96IP4 442 aaKnown RBP5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 CCDC74BQ96LY2 380 aa5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 ZNF214Q9UL59 606 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P17-201ENST00000403495 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 ESYT3A0FGR9 886 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 KRBA1A5PL33 1030 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 C9orf172C9J069 976 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 SLITRK5O94991 958 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 CHRNA4P43681 627 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 SLC7A5Q01650 507 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 RASGRF1Q13972 1273 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 ADGRE1Q14246 886 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 AXDND1Q5T1B0 1012 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 DCAF15Q66K64 600 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 KCT2Q8NC54 265 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 CYB5D2Q8WUJ1 264 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 SCARF2Q96GP6 870 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 CEP41Q9BYV8 373 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 KCNF1Q9H3M0 494 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 PHAXQ9H814 394 aaKnown RBP5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 SUCOQ9UBS9 1254 aaKnown RBP5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 LEMD3Q9Y2U8 911 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 SLC12A7Q9Y666 1083 aa5.76□□□□□ -1.49
HMGB1P17-201ENST00000403495 KDM2BQ8NHM5 1336 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 CNTNAP4Q9C0A0 1308 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 SUSD5O60279 629 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 LRRN2O75325 713 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 CLEC3AO75596 197 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 LEFTY1O75610 366 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 LRIG2O94898 1065 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 MAP4P27816 1152 aaKnown RBP5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 PMS1P54277 932 aaKnown RBP5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 CHMP4BP1P59074 171 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 INSM1Q01101 510 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 SSRP1Q08945 709 aaKnown RBP5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 SQSTM1Q13501 440 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 NFKBIBQ15653 356 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 SHISA5Q8N114 240 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 TOP6BLQ8N6T0 577 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 DNAJB8Q8NHS0 232 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 FGD4Q96M96 766 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 NACC1Q96RE7 527 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 ZMYM5Q9UJ78 669 aa5.75□□□□□ -1.49
HMGB1P17-201ENST00000403495 EPHX1P07099 455 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 CAP2P40123 477 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 SLC10A6Q3KNW5 377 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 EGFLAMQ63HQ2 1017 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 LETMD1Q6P1Q0 360 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 EEPD1Q7L9B9 569 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 LRP10Q7Z4F1 713 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 CCDC144CPQ8IYA2 1237 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 PPP1R14AQ96A00 147 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 MYRFLQ96LU7 910 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 MKRN2Q9H000 416 aaKnown RBP5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 FANCLQ9NW38 375 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 SUSD2Q9UGT4 822 aa5.74□□□□□ -1.49
HMGB1P17-201ENST00000403495 SBNO2Q9Y2G9 1366 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 FAM95CA0A1B0GW59 222 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 CBFA2T2O43439 604 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 NCAPHQ15003 741 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 SV2CQ496J9 727 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 BEND4Q6ZU67 534 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 TXNRD3Q86VQ6 643 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 FAM20CQ8IXL6 584 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 DZIP1LQ8IYY4 767 aaKnown RBP5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 ADCY4Q8NFM4 1077 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 EZH1Q92800 747 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 KREMEN1Q96MU8 473 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 PSMG3-AS1Q96PY0 264 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 HAUS7Q99871 368 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 PRDM10Q9NQV6 1147 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 C1GALT1Q9NS00 363 aa5.73□□□□□ -1.49
HMGB1P17-201ENST00000403495 APEX2Q9UBZ4 518 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms