RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 OTOP1Q7RTM1 612 aa16.84■□□□□ 0.29
HLA-DQB1-202ENST00000399079 NACAP1Q9BZK3 213 aa16.84■□□□□ 0.29
HLA-DQB1-202ENST00000399079 ARHGAP39Q9C0H5 1083 aa16.84■□□□□ 0.29
HLA-DQB1-202ENST00000399079 NAPBQ9H115 298 aa16.84■□□□□ 0.29
HLA-DQB1-202ENST00000399079 TMOD4Q9NZQ9 345 aa16.84■□□□□ 0.29
HLA-DQB1-202ENST00000399079 A0A1W2PRG0 241 aa16.83■□□□□ 0.28
HLA-DQB1-202ENST00000399079 TTC22Q5TAA0 569 aa16.83■□□□□ 0.28
HLA-DQB1-202ENST00000399079 TMEM179Q6ZVK1 233 aa16.83■□□□□ 0.28
HLA-DQB1-202ENST00000399079 SMCR8Q8TEV9 937 aaPredicted RBP16.83■□□□□ 0.28
HLA-DQB1-202ENST00000399079 FEZ1Q99689 392 aa16.83■□□□□ 0.28
HLA-DQB1-202ENST00000399079 TAOK2Q9UL54 1235 aa16.83■□□□□ 0.28
HLA-DQB1-202ENST00000399079 LOC285556D6RIA3 1793 aa16.83■□□□□ 0.28
HLA-DQB1-202ENST00000399079 PRDM1O75626 825 aa16.82■□□□□ 0.28
HLA-DQB1-202ENST00000399079 BCRP11274 1271 aa16.82■□□□□ 0.28
HLA-DQB1-202ENST00000399079 LACTBP83111 547 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-202ENST00000399079 TICAM2Q86XR7 235 aa16.82■□□□□ 0.28
HLA-DQB1-202ENST00000399079 SIAH1Q8IUQ4 282 aa16.82■□□□□ 0.28
HLA-DQB1-202ENST00000399079 CCDC17Q96LX7 622 aa16.82■□□□□ 0.28
HLA-DQB1-202ENST00000399079 ASCC2Q9H1I8 757 aaPredicted RBP16.82■□□□□ 0.28
HLA-DQB1-202ENST00000399079 EFCC1Q9HA90 598 aa16.82■□□□□ 0.28
HLA-DQB1-202ENST00000399079 ROBO3Q96MS0 1386 aa16.82■□□□□ 0.28
HLA-DQB1-202ENST00000399079 RASA1P20936 1047 aa16.81■□□□□ 0.28
HLA-DQB1-202ENST00000399079 CTGFP29279 349 aa16.81■□□□□ 0.28
HLA-DQB1-202ENST00000399079 USP17L2Q6R6M4 530 aa16.81■□□□□ 0.28
HLA-DQB1-202ENST00000399079 CWC27Q6UX04 472 aaKnown RBP16.81■□□□□ 0.28
HLA-DQB1-202ENST00000399079 SKAP1Q86WV1 359 aa16.81■□□□□ 0.28
HLA-DQB1-202ENST00000399079 KIAA1683Q9H0B3 1180 aa16.81■□□□□ 0.28
HLA-DQB1-202ENST00000399079 MKNK2Q9HBH9 465 aa16.81■□□□□ 0.28
HLA-DQB1-202ENST00000399079 HOXA7P31268 230 aaPredicted RBP16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 ICA1Q05084 483 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 PPARAQ07869 468 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 PABPC4Q13310 644 aaKnown RBP eCLIP16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 PKN2Q16513 984 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 ANKRD13CQ8N6S4 541 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 PNMA3Q9UL41 463 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 ZSWIM8A7E2V4 1837 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 MYH8P13535 1937 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 CCDC171Q6TFL3 1326 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 PEX10O60683 326 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 HSPD1P10809 573 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 OSBPP22059 807 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 USP14P54578 494 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 CTDSPL2Q05D32 466 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 C12orf42Q96LP6 360 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 P2RX7Q99572 595 aaKnown RBP16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 INCENPQ9NQS7 918 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 DIAPH3Q9NSV4 1193 aa16.8■□□□□ 0.28
HLA-DQB1-202ENST00000399079 BRCA2P51587 3418 aa16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 CCDC85CA6NKD9 419 aa16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 FGAP02671 866 aa16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 VCAM1P19320 739 aa16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 PSMC4P43686 418 aa16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 IRX3P78415 501 aaPredicted RBP16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 ATP2B2Q01814 1243 aa16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 KIF22Q14807 665 aa16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 KIAA1755Q5JYT7 1200 aa16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 FBXO46Q6PJ61 603 aaPredicted RBP16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 CENPQQ7L2Z9 268 aaPredicted RBP16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 TRIM47Q96LD4 638 aa16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 HPS5Q9UPZ3 1129 aa16.79■□□□□ 0.28
HLA-DQB1-202ENST00000399079 EEF2P13639 858 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-202ENST00000399079 IL25Q9H293 177 aa16.78■□□□□ 0.28
HLA-DQB1-202ENST00000399079 KANSL2Q9H9L4 492 aa16.78■□□□□ 0.28
HLA-DQB1-202ENST00000399079 PTPN22Q9Y2R2 807 aa16.78■□□□□ 0.28
HLA-DQB1-202ENST00000399079 TACC3Q9Y6A5 838 aa16.78■□□□□ 0.28
HLA-DQB1-202ENST00000399079 PDE4BQ07343 736 aa16.77■□□□□ 0.28
HLA-DQB1-202ENST00000399079 ALX1Q15699 326 aa16.77■□□□□ 0.28
HLA-DQB1-202ENST00000399079 POTEEQ6S8J3 1075 aa16.77■□□□□ 0.28
HLA-DQB1-202ENST00000399079 ZNF444Q8N0Y2 327 aaPredicted RBP16.77■□□□□ 0.28
HLA-DQB1-202ENST00000399079 SPICE1Q8N0Z3 855 aa16.77■□□□□ 0.28
HLA-DQB1-202ENST00000399079 ARHGEF10LQ9HCE6 1279 aa16.77■□□□□ 0.28
HLA-DQB1-202ENST00000399079 TMX2Q9Y320 296 aa16.77■□□□□ 0.28
HLA-DQB1-202ENST00000399079 HIP1O00291 1037 aa16.76■□□□□ 0.27
HLA-DQB1-202ENST00000399079 FMNL1O95466 1100 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB1-202ENST00000399079 HERVK_113P62684 666 aa16.76■□□□□ 0.27
HLA-DQB1-202ENST00000399079 FAM47AQ5JRC9 791 aa16.76■□□□□ 0.27
HLA-DQB1-202ENST00000399079 RPAP3Q9H6T3 665 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB1-202ENST00000399079 ZNF287Q9HBT7 754 aa16.76■□□□□ 0.27
HLA-DQB1-202ENST00000399079 TXNRD2Q9NNW7 524 aa16.76■□□□□ 0.27
HLA-DQB1-202ENST00000399079 USP17L15C9J2P7 530 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 USP17L13C9JLJ4 530 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 USP17L11C9JVI0 530 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 USP17L18D6R9N7 530 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 USP17L22D6RA61 530 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 USP17L17D6RBQ6 530 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 USP17L19D6RCP7 530 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 USP17L20D6RJB6 530 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 NEFLP07196 543 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 SLC3A2P08195 630 aaKnown RBP16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 GCLCP48506 637 aaPredicted RBP16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 HAND2P61296 217 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 USP17L24Q0WX57 530 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 ARHGEF6Q15052 776 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 FAM110CQ1W6H9 321 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 CATSPERGQ6ZRH7 1159 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 CCDC136Q96JN2 1154 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 ANAPC4Q9UJX5 808 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 PTCH2Q9Y6C5 1203 aa16.75■□□□□ 0.27
HLA-DQB1-202ENST00000399079 MFAP1P55081 439 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms