RNA–Protein interactions for RNA: ENST00000398610.2

PCDHGA10-201, Transcript of protocadherin gamma subfamily A, 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA10, Length 4,617 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA10-201ENST00000398610 NIM1KQ8IY84 436 aa11.88□□□□□ -0.51
PCDHGA10-201ENST00000398610 KAZALD1Q96I82 304 aa11.88□□□□□ -0.51
PCDHGA10-201ENST00000398610 IFNKQ9P0W0 207 aa11.88□□□□□ -0.51
PCDHGA10-201ENST00000398610 DBNLQ9UJU6 430 aaKnown RBP11.88□□□□□ -0.51
PCDHGA10-201ENST00000398610 CLRN2A0PK11 232 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 BMP15O95972 392 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 KARSQ15046 597 aaKnown RBP11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 TAF12Q16514 161 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 FERMT1Q9BQL6 677 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 SETSIPP0DME0 302 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 CERS3Q8IU89 383 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 IQUBQ8NA54 791 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 TMEM110-MUSTN1A8MSY1 372 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 TRAF5O00463 557 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 DYMQ7RTS9 669 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 C2CD5Q86YS7 1000 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 KIFC2Q96AC6 838 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 SRRTQ9BXP5 876 aaKnown RBP11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 SUDS3Q9H7L9 328 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 ZSWIM6Q9HCJ5 1215 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 CCDC169A6NNP5 214 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 POLR2DO15514 142 aaKnown RBP11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 FERP16591 822 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 TTC14Q96N46 770 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 PAGR1Q9BTK6 254 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 LZTFL1Q9NQ48 299 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 IKBKGQ9Y6K9 419 aa11.87□□□□□ -0.51
PCDHGA10-201ENST00000398610 RTL9Q8NET4 1388 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 RAPGEF1Q13905 1077 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 LRRC47Q8N1G4 583 aaKnown RBP11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 PPM1EQ8WY54 764 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 GPR101Q96P66 508 aaPredicted RBP11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 TPCN1Q9ULQ1 816 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 CCNT1O60563 726 aaKnown RBP11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 IVLP07476 585 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 CHRNDQ07001 517 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 TRAF1Q13077 416 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 ALS2CR12Q96Q35 445 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 VPS16Q9H269 839 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 TAOK3Q9H2K8 898 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 DBNDD1Q9H9R9 158 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 RMND1Q9NWS8 449 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 PDE6AP16499 860 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 SPICE1Q8N0Z3 855 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 MAP4K1Q92918 833 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 TSNARE1Q96NA8 513 aa11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 MPHOSPH6Q99547 160 aaKnown RBP11.86□□□□□ -0.51
PCDHGA10-201ENST00000398610 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 FAM114A1Q8IWE2 563 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 TM6SF1Q9BZW5 370 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 COPRSQ9NQ92 184 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 USP42Q9H9J4 1324 aaKnown RBP11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 GCOM1H8Y6P7 765 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 NDC80O14777 642 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 MYZAPP0CAP1 466 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 PLCB3Q01970 1234 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 DDX23Q9BUQ8 820 aaKnown RBP11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 TRPC5Q9UL62 973 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 IVNS1ABPQ9Y6Y0 642 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 E7EWF7 191 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 MNAT1P51948 309 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 BIRC3Q13489 604 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 NECTIN1Q15223 517 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 KRT40Q6A162 431 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 SYNE4Q8N205 404 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 ZBTB38Q8NAP3 1195 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 EHBP1Q8NDI1 1231 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 SMCR8Q8TEV9 937 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 NOD1Q9Y239 953 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 ATP5JP18859 108 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 UBXN1Q04323 297 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 CDC37L1Q7L3B6 337 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 RAB3IL1Q8TBN0 382 aa11.85□□□□□ -0.51
PCDHGA10-201ENST00000398610 MYCP01106 439 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 NCAPH2Q6IBW4 605 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 IMPG2Q9BZV3 1241 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 FRMPD2Q68DX3 1309 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 EEF2P13639 858 aaKnown RBP11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 TMEM87BQ96K49 555 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 ARHGEF10LQ9HCE6 1279 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 GUCA1BQ9UMX6 200 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 H7C1D1 291 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 RAD17O75943 681 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 FGAP02671 866 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 MCM6Q14566 821 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 RDH13Q8NBN7 331 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 FBF1Q8TES7 1133 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 PIGBQ92521 554 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 TEKT1Q969V4 418 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 PYM1Q9BRP8 204 aaKnown RBP11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 LRRC27Q9C0I9 530 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 TMOD4Q9NZQ9 345 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 LRRC37A3O60309 1634 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 MEGF6O75095 1541 aa11.84□□□□□ -0.51
PCDHGA10-201ENST00000398610 CTAGE15A4D2H0 777 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms