RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 TTC36A6NLP5 189 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 PPFIA4O75335 1185 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 CTNNA1P35221 906 aaKnown RBP13.06□□□□□ -0.32
TMF1-201ENST00000398559 SLC8A3P57103 927 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 NONOQ15233 471 aaKnown RBP eCLIP13.06□□□□□ -0.32
TMF1-201ENST00000398559 WHAMMP3Q1A5X7 153 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 TMCO4Q5TGY1 634 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 NBPF14Q5TI25 921 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 VPS37BQ9H9H4 285 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 MRPL44Q9H9J2 332 aaKnown RBP13.06□□□□□ -0.32
TMF1-201ENST00000398559 BCRP11274 1271 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 HOXC9P31274 260 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 DCUN1D2Q6PH85 259 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 PLBD2Q8NHP8 589 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 DESI2Q9BSY9 194 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 NR1I2O75469 434 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 ADCY7P51828 1080 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 DDB1Q16531 1140 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 ME3Q16798 604 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 RILPQ96NA2 401 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 NLRC4Q9NPP4 1024 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 DNM3Q9UQ16 869 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
TMF1-201ENST00000398559 WDR7Q9Y4E6 1490 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 RGS16O15492 202 aaPredicted RBP13.06□□□□□ -0.32
TMF1-201ENST00000398559 CASC4Q6P4E1 433 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 LSM14BQ9BX40 385 aaKnown RBP13.06□□□□□ -0.32
TMF1-201ENST00000398559 AATFQ9NY61 560 aaKnown RBP eCLIP13.06□□□□□ -0.32
TMF1-201ENST00000398559 hCG_1642624A0A1W2PR95 340 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 PPP2R5CQ13362 524 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 KRT25Q7Z3Z0 450 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 PARP2Q9UGN5 583 aa13.06□□□□□ -0.32
TMF1-201ENST00000398559 GOLGA8KD6RF30 607 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 BRD1O95696 1058 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 RFC1P35251 1148 aaPredicted RBP13.05□□□□□ -0.32
TMF1-201ENST00000398559 MAP2K2P36507 400 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 LGSNQ5TDP6 509 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 STX2P32856 288 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 ARHGAP44Q17R89 818 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 KBTBD3Q8NAB2 608 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 STK24Q9Y6E0 443 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 EXOC3O60645 756 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 ANKRD20A3Q5VUR7 823 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 TESK2Q96S53 571 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 VPS54Q9P1Q0 977 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 AMFRQ9UKV5 643 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 E7EWF7 191 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 RNF40O75150 1001 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 HIBADHP31937 336 aaKnown RBP13.05□□□□□ -0.32
TMF1-201ENST00000398559 CCDC89Q8N998 374 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 CCDC51Q96ER9 411 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 SUCLG2Q96I99 432 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 RPGRIP1Q96KN7 1286 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 RAB3IPQ96QF0 476 aaPredicted RBP13.05□□□□□ -0.32
TMF1-201ENST00000398559 KCNJ18B7U540 433 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 ATP1A2P50993 1020 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 KCNJ12Q14500 433 aa13.05□□□□□ -0.32
TMF1-201ENST00000398559 UGGT2Q9NYU1 1516 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 PFKFB1P16118 471 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 PDE1CQ14123 709 aaPredicted RBP13.04□□□□□ -0.32
TMF1-201ENST00000398559 MUM1Q2TAK8 710 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 SH2D4AQ9H788 454 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 GIPC1O14908 333 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 LRMPQ12912 555 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 CCDC84Q86UT8 332 aaPredicted RBP13.04□□□□□ -0.32
TMF1-201ENST00000398559 NUCKS1Q9H1E3 243 aaKnown RBP13.04□□□□□ -0.32
TMF1-201ENST00000398559 KIAA1468Q9P260 1216 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 PPP2R2CQ9Y2T4 447 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 KAT6BQ8WYB5 2073 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 RASSF2P50749 326 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 EYA3Q99504 573 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 MYCLP12524 364 aaPredicted RBP13.04□□□□□ -0.32
TMF1-201ENST00000398559 SATB1Q01826 763 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 TRIM68Q6AZZ1 485 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 ADALQ6DHV7 355 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 U2AF1L4Q8WU68 220 aaKnown RBP13.04□□□□□ -0.32
TMF1-201ENST00000398559 RBM17Q96I25 401 aaKnown RBP13.04□□□□□ -0.32
TMF1-201ENST00000398559 MORC3Q14149 939 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 CCDC117Q8IWD4 279 aaPredicted RBP13.04□□□□□ -0.32
TMF1-201ENST00000398559 TRIM58Q8NG06 486 aa13.04□□□□□ -0.32
TMF1-201ENST00000398559 USP19O94966 1318 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 KCNK3O14649 394 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 ZNF500O60304 480 aaPredicted RBP13.03□□□□□ -0.32
TMF1-201ENST00000398559 LRRC8AQ8IWT6 810 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 RIPOR2Q9Y4F9 1068 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 PCDH11XQ9BZA7 1347 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 PCDH11YQ9BZA8 1340 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 USH1GQ495M9 461 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 MAIP1Q8WWC4 291 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 CAPS2Q9BXY5 557 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 MAN1A1P33908 653 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 GBP5Q96PP8 586 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 GLT8D2Q9H1C3 349 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 ARHGEF10LQ9HCE6 1279 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 BUB1O43683 1085 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 TROVE2P10155 538 aaKnown RBP eCLIP13.03□□□□□ -0.32
TMF1-201ENST00000398559 GABPB2Q8TAK5 448 aaPredicted RBP13.03□□□□□ -0.32
TMF1-201ENST00000398559 ZNF532Q9HCE3 1301 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 EFCAB8A8MWE9 144 aa13.03□□□□□ -0.32
TMF1-201ENST00000398559 TAF5LO75529 589 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms