RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 TNKSO95271 1327 aa22.91■■□□□ 1.26
MAP1LC3A-203ENST00000397709 RAB3GAP1Q15042 981 aa22.91■■□□□ 1.26
MAP1LC3A-203ENST00000397709 SEC23AQ15436 765 aa22.91■■□□□ 1.26
MAP1LC3A-203ENST00000397709 CLEC10AQ8IUN9 316 aa22.91■■□□□ 1.26
MAP1LC3A-203ENST00000397709 IGDCC4Q8TDY8 1250 aa22.91■■□□□ 1.26
MAP1LC3A-203ENST00000397709 TMEM87BQ96K49 555 aa22.91■■□□□ 1.26
MAP1LC3A-203ENST00000397709 LRRC2Q9BYS8 371 aa22.91■■□□□ 1.26
MAP1LC3A-203ENST00000397709 PICK1Q9NRD5 415 aa22.91■■□□□ 1.26
MAP1LC3A-203ENST00000397709 MTMR4Q9NYA4 1195 aa22.91■■□□□ 1.26
MAP1LC3A-203ENST00000397709 PHIPQ8WWQ0 1821 aa22.91■■□□□ 1.26
MAP1LC3A-203ENST00000397709 SH2B2O14492 632 aaPredicted RBP22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 IFIT3O14879 490 aaKnown RBP22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 PTPRAP18433 802 aa22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 ICA1Q05084 483 aa22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 SART3Q15020 963 aaKnown RBP22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 PPP4R3BQ5MIZ7 849 aa22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 RCSD1Q6JBY9 416 aa22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 FBXL16Q8N461 479 aa22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 ENAHQ8N8S7 591 aaPredicted RBP22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 ANKS1AQ92625 1134 aa22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 CLMNQ96JQ2 1002 aa22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 TTC14Q96N46 770 aa22.9■■□□□ 1.26
MAP1LC3A-203ENST00000397709 USP17L5A8MUK1 530 aa22.89■■□□□ 1.25
MAP1LC3A-203ENST00000397709 NEK4P51957 841 aa22.89■■□□□ 1.25
MAP1LC3A-203ENST00000397709 DGKHQ86XP1 1220 aa22.89■■□□□ 1.25
MAP1LC3A-203ENST00000397709 SIAH1Q8IUQ4 282 aa22.89■■□□□ 1.25
MAP1LC3A-203ENST00000397709 AGXT2Q9BYV1 514 aa22.89■■□□□ 1.25
MAP1LC3A-203ENST00000397709 ALDH8A1Q9H2A2 487 aaPredicted RBP22.89■■□□□ 1.25
MAP1LC3A-203ENST00000397709 ELP3Q9H9T3 547 aa22.89■■□□□ 1.25
MAP1LC3A-203ENST00000397709 LY9Q9HBG7 655 aa22.89■■□□□ 1.25
MAP1LC3A-203ENST00000397709 PDRG1Q9NUG6 133 aa22.89■■□□□ 1.25
MAP1LC3A-203ENST00000397709 NYAP2Q9P242 653 aa22.89■■□□□ 1.25
MAP1LC3A-203ENST00000397709 TMEM88BA6NKF7 163 aa22.88■■□□□ 1.25
MAP1LC3A-203ENST00000397709 TTLL1O95922 423 aa22.88■■□□□ 1.25
MAP1LC3A-203ENST00000397709 TMEM67Q5HYA8 995 aa22.88■■□□□ 1.25
MAP1LC3A-203ENST00000397709 Q6ZUG5 572 aa22.88■■□□□ 1.25
MAP1LC3A-203ENST00000397709 CCDC84Q86UT8 332 aaPredicted RBP22.88■■□□□ 1.25
MAP1LC3A-203ENST00000397709 IL27Q8NEV9 243 aa22.88■■□□□ 1.25
MAP1LC3A-203ENST00000397709 GPHNQ9NQX3 736 aaPredicted RBP22.88■■□□□ 1.25
MAP1LC3A-203ENST00000397709 MYH4Q9Y623 1939 aa22.88■■□□□ 1.25
MAP1LC3A-203ENST00000397709 ERICH2A1L162 156 aa22.87■■□□□ 1.25
MAP1LC3A-203ENST00000397709 SPDYE5A6NIY4 337 aa22.87■■□□□ 1.25
MAP1LC3A-203ENST00000397709 EEF2P13639 858 aaKnown RBP22.87■■□□□ 1.25
MAP1LC3A-203ENST00000397709 LIFRP42702 1097 aa22.87■■□□□ 1.25
MAP1LC3A-203ENST00000397709 HUNKP57058 714 aa22.87■■□□□ 1.25
MAP1LC3A-203ENST00000397709 WTAPQ15007 396 aa22.87■■□□□ 1.25
MAP1LC3A-203ENST00000397709 WDR18Q9BV38 432 aa22.87■■□□□ 1.25
MAP1LC3A-203ENST00000397709 TBC1D2Q9BYX2 928 aa22.87■■□□□ 1.25
MAP1LC3A-203ENST00000397709 SENP2Q9HC62 589 aa22.87■■□□□ 1.25
MAP1LC3A-203ENST00000397709 STX8Q9UNK0 236 aa22.87■■□□□ 1.25
MAP1LC3A-203ENST00000397709 TLL2Q9Y6L7 1015 aa22.87■■□□□ 1.25
MAP1LC3A-203ENST00000397709 TOB2Q14106 344 aaPredicted RBP22.86■■□□□ 1.25
MAP1LC3A-203ENST00000397709 IFIT1BQ5T764 474 aaKnown RBP22.86■■□□□ 1.25
MAP1LC3A-203ENST00000397709 SAPCD2Q86UD0 394 aa22.86■■□□□ 1.25
MAP1LC3A-203ENST00000397709 ERO1BQ86YB8 467 aa22.86■■□□□ 1.25
MAP1LC3A-203ENST00000397709 MKL1Q969V6 931 aa22.86■■□□□ 1.25
MAP1LC3A-203ENST00000397709 TMEM47Q9BQJ4 181 aa22.86■■□□□ 1.25
MAP1LC3A-203ENST00000397709 AS3MTQ9HBK9 375 aa22.86■■□□□ 1.25
MAP1LC3A-203ENST00000397709 ZHX2Q9Y6X8 837 aa22.86■■□□□ 1.25
MAP1LC3A-203ENST00000397709 TOP1P11387 765 aaKnown RBP22.85■■□□□ 1.25
MAP1LC3A-203ENST00000397709 PPATQ06203 517 aa22.85■■□□□ 1.25
MAP1LC3A-203ENST00000397709 SGMS1Q86VZ5 419 aa22.85■■□□□ 1.25
MAP1LC3A-203ENST00000397709 ACER1Q8TDN7 264 aa22.85■■□□□ 1.25
MAP1LC3A-203ENST00000397709 CNKSR2Q8WXI2 1034 aa22.85■■□□□ 1.25
MAP1LC3A-203ENST00000397709 ARHGEF10LQ9HCE6 1279 aa22.85■■□□□ 1.25
MAP1LC3A-203ENST00000397709 CLIP2Q9UDT6 1046 aa22.85■■□□□ 1.25
MAP1LC3A-203ENST00000397709 SYNPO2Q9UMS6 1093 aa22.85■■□□□ 1.25
MAP1LC3A-203ENST00000397709 A0A1W2PRG0 241 aa22.84■■□□□ 1.25
MAP1LC3A-203ENST00000397709 ECE1P42892 770 aa22.84■■□□□ 1.25
MAP1LC3A-203ENST00000397709 APLP1P51693 650 aa22.84■■□□□ 1.25
MAP1LC3A-203ENST00000397709 AK2P54819 239 aa22.84■■□□□ 1.25
MAP1LC3A-203ENST00000397709 FGD1P98174 961 aa22.84■■□□□ 1.25
MAP1LC3A-203ENST00000397709 ATP2B2Q01814 1243 aa22.84■■□□□ 1.25
MAP1LC3A-203ENST00000397709 TMTC2Q8N394 836 aa22.84■■□□□ 1.25
MAP1LC3A-203ENST00000397709 ZNF280CQ8ND82 737 aa22.84■■□□□ 1.25
MAP1LC3A-203ENST00000397709 SLC10A4Q96EP9 437 aa22.84■■□□□ 1.25
MAP1LC3A-203ENST00000397709 AFG3L2Q9Y4W6 797 aa22.84■■□□□ 1.25
MAP1LC3A-203ENST00000397709 PPIL2Q13356 520 aa22.83■■□□□ 1.25
MAP1LC3A-203ENST00000397709 LRRC47Q8N1G4 583 aaKnown RBP22.83■■□□□ 1.25
MAP1LC3A-203ENST00000397709 BRF1Q92994 677 aa22.83■■□□□ 1.25
MAP1LC3A-203ENST00000397709 OPTNQ96CV9 577 aa22.83■■□□□ 1.25
MAP1LC3A-203ENST00000397709 SH2D4AQ9H788 454 aa22.83■■□□□ 1.25
MAP1LC3A-203ENST00000397709 TMX2Q9Y320 296 aa22.83■■□□□ 1.25
MAP1LC3A-203ENST00000397709 ST18O60284 1047 aa22.82■■□□□ 1.24
MAP1LC3A-203ENST00000397709 GJA5P36382 358 aa22.82■■□□□ 1.24
MAP1LC3A-203ENST00000397709 ANKRD1Q15327 319 aa22.82■■□□□ 1.24
MAP1LC3A-203ENST00000397709 OTUD5Q96G74 571 aa22.82■■□□□ 1.24
MAP1LC3A-203ENST00000397709 WNK4Q96J92 1243 aa22.82■■□□□ 1.24
MAP1LC3A-203ENST00000397709 KAT14Q9H8E8 782 aa22.82■■□□□ 1.24
MAP1LC3A-203ENST00000397709 CREBZFQ9NS37 354 aa22.82■■□□□ 1.24
MAP1LC3A-203ENST00000397709 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.82■■□□□ 1.24
MAP1LC3A-203ENST00000397709 PTPRFP10586 1907 aa22.81■■□□□ 1.24
MAP1LC3A-203ENST00000397709 CCDC69A6NI79 296 aa22.81■■□□□ 1.24
MAP1LC3A-203ENST00000397709 EVCP57679 992 aa22.81■■□□□ 1.24
MAP1LC3A-203ENST00000397709 SPP2Q13103 211 aa22.81■■□□□ 1.24
MAP1LC3A-203ENST00000397709 PNMA1Q8ND90 353 aa22.81■■□□□ 1.24
MAP1LC3A-203ENST00000397709 HHIPL1Q96JK4 782 aa22.81■■□□□ 1.24
MAP1LC3A-203ENST00000397709 KIAA1683Q9H0B3 1180 aa22.81■■□□□ 1.24
MAP1LC3A-203ENST00000397709 BRPF3Q9ULD4 1205 aa22.81■■□□□ 1.24
MAP1LC3A-203ENST00000397709 ABT1Q9ULW3 272 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms