RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PRDM1O75626 825 aa30.16■■■□□ 2.42
TSPAN4-207ENST00000397411 CTDSPL2Q05D32 466 aa30.16■■■□□ 2.42
TSPAN4-207ENST00000397411 ZYXQ15942 572 aaKnown RBP30.16■■■□□ 2.42
TSPAN4-207ENST00000397411 SH3D19Q5HYK7 790 aa30.16■■■□□ 2.42
TSPAN4-207ENST00000397411 AGTPBP1Q9UPW5 1226 aa30.16■■■□□ 2.42
TSPAN4-207ENST00000397411 ROBO3Q96MS0 1386 aa30.15■■■□□ 2.42
TSPAN4-207ENST00000397411 GUCY1A2P33402 732 aa30.15■■■□□ 2.42
TSPAN4-207ENST00000397411 USP14P54578 494 aa30.15■■■□□ 2.42
TSPAN4-207ENST00000397411 ATP2B2Q01814 1243 aa30.15■■■□□ 2.42
TSPAN4-207ENST00000397411 COL13A1Q5TAT6 717 aaPredicted RBP30.15■■■□□ 2.42
TSPAN4-207ENST00000397411 ZNF296Q8WUU4 475 aaPredicted RBP30.15■■■□□ 2.42
TSPAN4-207ENST00000397411 PARK7Q99497 189 aaKnown RBP30.15■■■□□ 2.42
TSPAN4-207ENST00000397411 ARHGEF10LQ9HCE6 1279 aa30.15■■■□□ 2.42
TSPAN4-207ENST00000397411 NOM1Q5C9Z4 860 aaKnown RBP30.14■■■□□ 2.42
TSPAN4-207ENST00000397411 ACER1Q8TDN7 264 aa30.14■■■□□ 2.42
TSPAN4-207ENST00000397411 PNMA3Q9UL41 463 aa30.14■■■□□ 2.42
TSPAN4-207ENST00000397411 SLC45A1Q9Y2W3 748 aa30.14■■■□□ 2.42
TSPAN4-207ENST00000397411 RASA1P20936 1047 aa30.13■■■□□ 2.41
TSPAN4-207ENST00000397411 OSBPP22059 807 aa30.13■■■□□ 2.41
TSPAN4-207ENST00000397411 ICA1Q05084 483 aa30.13■■■□□ 2.41
TSPAN4-207ENST00000397411 DGKZQ13574 1117 aa30.13■■■□□ 2.41
TSPAN4-207ENST00000397411 TREML2Q5T2D2 321 aa30.13■■■□□ 2.41
TSPAN4-207ENST00000397411 KANSL2Q9H9L4 492 aa30.13■■■□□ 2.41
TSPAN4-207ENST00000397411 TOMM22Q9NS69 142 aa30.13■■■□□ 2.41
TSPAN4-207ENST00000397411 TLR2O60603 784 aa30.12■■■□□ 2.41
TSPAN4-207ENST00000397411 BMP2KLQ5H9B9 411 aa30.12■■■□□ 2.41
TSPAN4-207ENST00000397411 SH2D4AQ9H788 454 aa30.12■■■□□ 2.41
TSPAN4-207ENST00000397411 CTNNA3Q9UI47 895 aa30.12■■■□□ 2.41
TSPAN4-207ENST00000397411 ANAPC4Q9UJX5 808 aa30.12■■■□□ 2.41
TSPAN4-207ENST00000397411 RAD50Q92878 1312 aa30.12■■■□□ 2.41
TSPAN4-207ENST00000397411 CYP2C8P10632 490 aa30.11■■■□□ 2.41
TSPAN4-207ENST00000397411 HAND2P61296 217 aa30.11■■■□□ 2.41
TSPAN4-207ENST00000397411 SMCR8Q8TEV9 937 aaPredicted RBP30.11■■■□□ 2.41
TSPAN4-207ENST00000397411 DSCC1Q9BVC3 393 aa30.11■■■□□ 2.41
TSPAN4-207ENST00000397411 KIAA1683Q9H0B3 1180 aa30.11■■■□□ 2.41
TSPAN4-207ENST00000397411 ZNF213O14771 459 aa30.1■■■□□ 2.41
TSPAN4-207ENST00000397411 TSPY3P0CV98 308 aa30.1■■■□□ 2.41
TSPAN4-207ENST00000397411 TSPY8P0CW00 308 aa30.1■■■□□ 2.41
TSPAN4-207ENST00000397411 SP3Q02447 781 aa30.1■■■□□ 2.41
TSPAN4-207ENST00000397411 EMILIN3Q9NT22 766 aa30.1■■■□□ 2.41
TSPAN4-207ENST00000397411 ZMYM6O95789 1325 aa30.1■■■□□ 2.41
TSPAN4-207ENST00000397411 IRX3P78415 501 aaPredicted RBP30.09■■■□□ 2.41
TSPAN4-207ENST00000397411 TFAP4Q01664 338 aa30.09■■■□□ 2.41
TSPAN4-207ENST00000397411 CPA4Q9UI42 421 aa30.09■■■□□ 2.41
TSPAN4-207ENST00000397411 EEF2P13639 858 aaKnown RBP30.08■■■□□ 2.41
TSPAN4-207ENST00000397411 FAM47AQ5JRC9 791 aa30.08■■■□□ 2.41
TSPAN4-207ENST00000397411 RRP12Q5JTH9 1297 aaKnown RBP30.08■■■□□ 2.41
TSPAN4-207ENST00000397411 CASC1Q6TDU7 716 aa30.08■■■□□ 2.41
TSPAN4-207ENST00000397411 CLEC10AQ8IUN9 316 aa30.08■■■□□ 2.41
TSPAN4-207ENST00000397411 ERO1AQ96HE7 468 aa30.08■■■□□ 2.41
TSPAN4-207ENST00000397411 INCENPQ9NQS7 918 aa30.08■■■□□ 2.41
TSPAN4-207ENST00000397411 TSPY2A6NKD2 308 aa30.07■■■□□ 2.4
TSPAN4-207ENST00000397411 RANBP6O60518 1105 aaKnown RBP30.07■■■□□ 2.4
TSPAN4-207ENST00000397411 KIAA1211Q6ZU35 1233 aa30.07■■■□□ 2.4
TSPAN4-207ENST00000397411 LOC285556D6RIA3 1793 aa30.06■■■□□ 2.4
TSPAN4-207ENST00000397411 A0A1W2PRG0 241 aa30.06■■■□□ 2.4
TSPAN4-207ENST00000397411 RAD21O60216 631 aa30.06■■■□□ 2.4
TSPAN4-207ENST00000397411 KIF22Q14807 665 aa30.06■■■□□ 2.4
TSPAN4-207ENST00000397411 IMMTQ16891 758 aaKnown RBP30.06■■■□□ 2.4
TSPAN4-207ENST00000397411 MFSD6Q6ZSS7 791 aa30.06■■■□□ 2.4
TSPAN4-207ENST00000397411 C12orf42Q96LP6 360 aa30.06■■■□□ 2.4
TSPAN4-207ENST00000397411 ASCC2Q9H1I8 757 aaPredicted RBP30.06■■■□□ 2.4
TSPAN4-207ENST00000397411 SGSM2O43147 1006 aa30.05■■■□□ 2.4
TSPAN4-207ENST00000397411 ARHGEF6Q15052 776 aa30.05■■■□□ 2.4
TSPAN4-207ENST00000397411 TNS4Q8IZW8 715 aa30.05■■■□□ 2.4
TSPAN4-207ENST00000397411 NEDD1Q8NHV4 660 aa30.05■■■□□ 2.4
TSPAN4-207ENST00000397411 IL25Q9H293 177 aa30.05■■■□□ 2.4
TSPAN4-207ENST00000397411 RNF41Q9H4P4 317 aaPredicted RBP30.05■■■□□ 2.4
TSPAN4-207ENST00000397411 TMX2Q9Y320 296 aa30.05■■■□□ 2.4
TSPAN4-207ENST00000397411 USP17L15C9J2P7 530 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 USP17L13C9JLJ4 530 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 USP17L11C9JVI0 530 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 USP17L18D6R9N7 530 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 USP17L22D6RA61 530 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 USP17L17D6RBQ6 530 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 USP17L19D6RCP7 530 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 USP17L20D6RJB6 530 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 HOXA7P31268 230 aaPredicted RBP30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 USP17L24Q0WX57 530 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 C17orf99Q6UX52 265 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 SIAH1Q8IUQ4 282 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 CD99L2Q8TCZ2 262 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 CLIP2Q9UDT6 1046 aa30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.04■■■□□ 2.4
TSPAN4-207ENST00000397411 ORC4O43929 436 aa30.03■■■□□ 2.4
TSPAN4-207ENST00000397411 AKNAD1Q5T1N1 836 aa30.03■■■□□ 2.4
TSPAN4-207ENST00000397411 CTU1Q7Z7A3 348 aaKnown RBP30.03■■■□□ 2.4
TSPAN4-207ENST00000397411 GOPCQ9HD26 462 aa30.03■■■□□ 2.4
TSPAN4-207ENST00000397411 NYAP2Q9P242 653 aa30.03■■■□□ 2.4
TSPAN4-207ENST00000397411 PCP11498 1178 aaKnown RBP30.02■■■□□ 2.4
TSPAN4-207ENST00000397411 VCAM1P19320 739 aa30.02■■■□□ 2.4
TSPAN4-207ENST00000397411 PPP4R3BQ5MIZ7 849 aa30.02■■■□□ 2.4
TSPAN4-207ENST00000397411 P2RX7Q99572 595 aaKnown RBP30.02■■■□□ 2.4
TSPAN4-207ENST00000397411 ECM2O94769 699 aaPredicted RBP30.01■■■□□ 2.39
TSPAN4-207ENST00000397411 GCLCP48506 637 aaPredicted RBP30.01■■■□□ 2.39
TSPAN4-207ENST00000397411 LPAR1Q92633 364 aa30.01■■■□□ 2.39
TSPAN4-207ENST00000397411 CEP95Q96GE4 821 aa30.01■■■□□ 2.39
TSPAN4-207ENST00000397411 RPAP3Q9H6T3 665 aaPredicted RBP30.01■■■□□ 2.39
TSPAN4-207ENST00000397411 VCPKMTQ9H867 229 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms