RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 KANSL2Q9H9L4 492 aa22.18■■□□□ 1.14
TSPAN4-204ENST00000397404 CABP5Q9NP86 173 aa22.18■■□□□ 1.14
TSPAN4-204ENST00000397404 FOXD4L1Q9NU39 408 aa22.18■■□□□ 1.14
TSPAN4-204ENST00000397404 MTMR4Q9NYA4 1195 aa22.18■■□□□ 1.14
TSPAN4-204ENST00000397404 SIPA1L1O43166 1804 aa22.18■■□□□ 1.14
TSPAN4-204ENST00000397404 IQCA1LA6NCM1 817 aa22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 DCAF8L1A6NGE4 600 aa22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 CCT2P78371 535 aaKnown RBP22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 EVX2Q03828 476 aa22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 TBC1D10BQ4KMP7 808 aaPredicted RBP22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 USP50Q70EL3 339 aaPredicted RBP22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 SAMD7Q7Z3H4 446 aa22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 TRIM22Q8IYM9 498 aa22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 PNMA1Q8ND90 353 aa22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 NKX2-3Q8TAU0 364 aa22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 ZC3H15Q8WU90 426 aaKnown RBP22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.17■■□□□ 1.142e-8■■■■■ 42.5
TSPAN4-204ENST00000397404 HACL1Q9UJ83 578 aa22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 STX8Q9UNK0 236 aa22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 GREB1LQ9C091 1923 aaPredicted RBP22.17■■□□□ 1.14
TSPAN4-204ENST00000397404 PTPDC1A2A3K4 754 aa22.16■■□□□ 1.14
TSPAN4-204ENST00000397404 GLTPD2A6NH11 291 aa22.16■■□□□ 1.14
TSPAN4-204ENST00000397404 RASA3Q14644 834 aa22.16■■□□□ 1.14
TSPAN4-204ENST00000397404 RBM26Q5T8P6 1007 aaKnown RBP22.16■■□□□ 1.14
TSPAN4-204ENST00000397404 DCAF15Q66K64 600 aa22.16■■□□□ 1.14
TSPAN4-204ENST00000397404 STX6O43752 255 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 SMARCA1P28370 1054 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 LARP1BQ659C4 914 aaKnown RBP22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 MKL1Q969V6 931 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 CEP95Q96GE4 821 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 DNAJC18Q9H819 358 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 NYAP2Q9P242 653 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 PGAP2Q9UHJ9 254 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 DDNO94850 711 aaPredicted RBP22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 BRD1O95696 1058 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 ABCB5Q2M3G0 1257 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 CLEC17AQ6ZS10 378 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 FAM177A1Q8N128 213 aaPredicted RBP22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 GBP4Q96PP9 640 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 DEFB129Q9H1M3 183 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 SCN4AP35499 1836 aa22.15■■□□□ 1.14
TSPAN4-204ENST00000397404 AKR1B1P15121 316 aa22.14■■□□□ 1.13
TSPAN4-204ENST00000397404 SYT1P21579 422 aa22.14■■□□□ 1.13
TSPAN4-204ENST00000397404 NUP133Q8WUM0 1156 aa22.14■■□□□ 1.13
TSPAN4-204ENST00000397404 TMEM47Q9BQJ4 181 aa22.14■■□□□ 1.13
TSPAN4-204ENST00000397404 RNF26Q9BY78 433 aaPredicted RBP22.14■■□□□ 1.13
TSPAN4-204ENST00000397404 CTDNEP1O95476 244 aa22.13■■□□□ 1.13
TSPAN4-204ENST00000397404 PTMSP20962 102 aa22.13■■□□□ 1.13
TSPAN4-204ENST00000397404 SSRP1Q08945 709 aaKnown RBP22.13■■□□□ 1.13
TSPAN4-204ENST00000397404 NTRK3Q16288 839 aa22.13■■□□□ 1.13
TSPAN4-204ENST00000397404 TMEM39BQ9GZU3 492 aa22.13■■□□□ 1.13
TSPAN4-204ENST00000397404 SENP2Q9HC62 589 aa22.13■■□□□ 1.13
TSPAN4-204ENST00000397404 NCOA5Q9HCD5 579 aaKnown RBP22.13■■□□□ 1.13
TSPAN4-204ENST00000397404 SHTN1A0MZ66 631 aa22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 MPHOSPH10O00566 681 aaKnown RBP22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 NMT2O60551 498 aa22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 ADD1P35611 737 aaKnown RBP22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 EPS15P42566 896 aa22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 AKAP17AQ02040 695 aaKnown RBP22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 GRM4Q14833 912 aa22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 SUPT20HL1Q3ZLR7 823 aa22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 PNMA8AQ86V59 439 aaPredicted RBP22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 TEPSINQ96N21 525 aa22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 SH2D4AQ9H788 454 aa22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 FAM217BQ9NTX9 383 aaPredicted RBP22.12■■□□□ 1.13
TSPAN4-204ENST00000397404 DEXIO95424 95 aa22.11■■□□□ 1.13
TSPAN4-204ENST00000397404 FMNL1O95466 1100 aaPredicted RBP22.11■■□□□ 1.13
TSPAN4-204ENST00000397404 ASNSP08243 561 aa22.11■■□□□ 1.13
TSPAN4-204ENST00000397404 XBP1P17861 261 aa22.11■■□□□ 1.13
TSPAN4-204ENST00000397404 ANGEL2Q5VTE6 544 aaKnown RBP22.11■■□□□ 1.13
TSPAN4-204ENST00000397404 ORC3Q9UBD5 711 aaPredicted RBP22.11■■□□□ 1.13
TSPAN4-204ENST00000397404 H3BQV1 296 aa22.1■■□□□ 1.13
TSPAN4-204ENST00000397404 EGFRP00533 1210 aa22.1■■□□□ 1.13
TSPAN4-204ENST00000397404 ZSCAN22P10073 491 aaPredicted RBP22.1■■□□□ 1.13
TSPAN4-204ENST00000397404 CDC27P30260 824 aa22.1■■□□□ 1.13
TSPAN4-204ENST00000397404 ASPRV1Q53RT3 343 aa22.1■■□□□ 1.13
TSPAN4-204ENST00000397404 GPATCH4Q5T3I0 446 aaKnown RBP22.1■■□□□ 1.13
TSPAN4-204ENST00000397404 IFFO2Q5TF58 517 aa22.1■■□□□ 1.13
TSPAN4-204ENST00000397404 TMTC3Q6ZXV5 915 aa22.1■■□□□ 1.13
TSPAN4-204ENST00000397404 TRPM4Q8TD43 1214 aa22.1■■□□□ 1.13
TSPAN4-204ENST00000397404 DCPSQ96C86 337 aaKnown RBP22.1■■□□□ 1.13
TSPAN4-204ENST00000397404 ZSCAN16Q9H4T2 348 aaPredicted RBP22.1■■□□□ 1.13
TSPAN4-204ENST00000397404 ICA1Q05084 483 aa22.09■■□□□ 1.13
TSPAN4-204ENST00000397404 ARHGEF10LQ9HCE6 1279 aa22.09■■□□□ 1.13
TSPAN4-204ENST00000397404 GGA3Q9NZ52 723 aa22.09■■□□□ 1.13
TSPAN4-204ENST00000397404 WDR90Q96KV7 1748 aa22.09■■□□□ 1.13
TSPAN4-204ENST00000397404 PRPF3O43395 683 aaKnown RBP22.09■■□□□ 1.13
TSPAN4-204ENST00000397404 JAK2O60674 1132 aa22.09■■□□□ 1.13
TSPAN4-204ENST00000397404 CTNND1O60716 968 aaKnown RBP22.09■■□□□ 1.13
TSPAN4-204ENST00000397404 PARP1P09874 1014 aaKnown RBP22.09■■□□□ 1.13
TSPAN4-204ENST00000397404 SNHG28P0DPA3 235 aa22.09■■□□□ 1.13
TSPAN4-204ENST00000397404 MYL10Q9BUA6 226 aa22.09■■□□□ 1.13
TSPAN4-204ENST00000397404 GOLGA6L22H0YM25 854 aa22.08■■□□□ 1.12
TSPAN4-204ENST00000397404 CAP2P40123 477 aa22.08■■□□□ 1.12
TSPAN4-204ENST00000397404 TRIM29Q14134 588 aa22.08■■□□□ 1.12
TSPAN4-204ENST00000397404 SULF1Q8IWU6 871 aa22.08■■□□□ 1.12
TSPAN4-204ENST00000397404 GMCL1P1Q8NEA9 526 aa22.08■■□□□ 1.12
TSPAN4-204ENST00000397404 ZNF341Q9BYN7 854 aa22.08■■□□□ 1.12
TSPAN4-204ENST00000397404 SRCAPQ6ZRS2 3230 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms