RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ELP3Q9H9T3 547 aa27.79■■■□□ 2.04
TSPAN4-203ENST00000397397 IL17RBQ9NRM6 502 aa27.79■■■□□ 2.04
TSPAN4-203ENST00000397397 TCP11L1Q9NUJ3 509 aa27.79■■■□□ 2.04
TSPAN4-203ENST00000397397 EXOSC10Q01780 885 aaKnown RBP27.78■■■□□ 2.04
TSPAN4-203ENST00000397397 CEP95Q96GE4 821 aa27.78■■■□□ 2.04
TSPAN4-203ENST00000397397 TCEANC2Q96MN5 208 aa27.78■■■□□ 2.04
TSPAN4-203ENST00000397397 ZSCAN10Q96SZ4 725 aaPredicted RBP27.78■■■□□ 2.04
TSPAN4-203ENST00000397397 KANSL2Q9H9L4 492 aa27.78■■■□□ 2.04
TSPAN4-203ENST00000397397 HUNKP57058 714 aa27.77■■■□□ 2.04
TSPAN4-203ENST00000397397 SART3Q15020 963 aaKnown RBP27.77■■■□□ 2.04
TSPAN4-203ENST00000397397 CCDC178Q5BJE1 867 aa27.77■■■□□ 2.04
TSPAN4-203ENST00000397397 CCDC84Q86UT8 332 aaPredicted RBP27.77■■■□□ 2.04
TSPAN4-203ENST00000397397 CLEC10AQ8IUN9 316 aa27.77■■■□□ 2.04
TSPAN4-203ENST00000397397 JMYQ8N9B5 988 aa27.77■■■□□ 2.04
TSPAN4-203ENST00000397397 LRRC2Q9BYS8 371 aa27.77■■■□□ 2.04
TSPAN4-203ENST00000397397 WDR19Q8NEZ3 1342 aa27.77■■■□□ 2.04
TSPAN4-203ENST00000397397 USP17L5A8MUK1 530 aa27.76■■■□□ 2.04
TSPAN4-203ENST00000397397 IFIT3O14879 490 aaKnown RBP27.76■■■□□ 2.04
TSPAN4-203ENST00000397397 PTPRAP18433 802 aa27.76■■■□□ 2.04
TSPAN4-203ENST00000397397 ICA1Q05084 483 aa27.76■■■□□ 2.04
TSPAN4-203ENST00000397397 SLC10A4Q96EP9 437 aa27.76■■■□□ 2.04
TSPAN4-203ENST00000397397 MTMR4Q9NYA4 1195 aa27.76■■■□□ 2.04
TSPAN4-203ENST00000397397 TNKSO95271 1327 aa27.76■■■□□ 2.03
TSPAN4-203ENST00000397397 ERICH2A1L162 156 aa27.75■■■□□ 2.03
TSPAN4-203ENST00000397397 ATP2B2Q01814 1243 aa27.75■■■□□ 2.03
TSPAN4-203ENST00000397397 TMEM67Q5HYA8 995 aa27.75■■■□□ 2.03
TSPAN4-203ENST00000397397 TMEM87BQ96K49 555 aa27.75■■■□□ 2.03
TSPAN4-203ENST00000397397 ABT1Q9ULW3 272 aaKnown RBP27.75■■■□□ 2.03
TSPAN4-203ENST00000397397 RABEP1Q15276 862 aa27.75■■■□□ 2.03
TSPAN4-203ENST00000397397 PPP4R3BQ5MIZ7 849 aa27.75■■■□□ 2.03
TSPAN4-203ENST00000397397 MTA3Q9BTC8 594 aa27.75■■■□□ 2.03
TSPAN4-203ENST00000397397 PDRG1Q9NUG6 133 aa27.75■■■□□ 2.03
TSPAN4-203ENST00000397397 STX8Q9UNK0 236 aa27.75■■■□□ 2.03
TSPAN4-203ENST00000397397 TLL2Q9Y6L7 1015 aa27.75■■■□□ 2.03
TSPAN4-203ENST00000397397 TTLL1O95922 423 aa27.74■■■□□ 2.03
TSPAN4-203ENST00000397397 EEF2P13639 858 aaKnown RBP27.74■■■□□ 2.03
TSPAN4-203ENST00000397397 NEK4P51957 841 aa27.74■■■□□ 2.03
TSPAN4-203ENST00000397397 FGD1P98174 961 aa27.74■■■□□ 2.03
TSPAN4-203ENST00000397397 SAPCD2Q86UD0 394 aa27.74■■■□□ 2.03
TSPAN4-203ENST00000397397 ENAHQ8N8S7 591 aaPredicted RBP27.74■■■□□ 2.03
TSPAN4-203ENST00000397397 IGDCC4Q8TDY8 1250 aa27.74■■■□□ 2.03
TSPAN4-203ENST00000397397 AS3MTQ9HBK9 375 aa27.74■■■□□ 2.03
TSPAN4-203ENST00000397397 NYAP2Q9P242 653 aa27.74■■■□□ 2.03
TSPAN4-203ENST00000397397 CLIP2Q9UDT6 1046 aa27.74■■■□□ 2.03
TSPAN4-203ENST00000397397 ZHX2Q9Y6X8 837 aa27.74■■■□□ 2.03
TSPAN4-203ENST00000397397 MYH4Q9Y623 1939 aa27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 PHIPQ8WWQ0 1821 aa27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 RASSF10A6NK89 507 aa27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 SH2B2O14492 632 aaPredicted RBP27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 WTAPQ15007 396 aa27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 SEC23AQ15436 765 aa27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 Q6ZUG5 572 aa27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 DGKHQ86XP1 1220 aa27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 ERO1BQ86YB8 467 aa27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 CNKSR2Q8WXI2 1034 aa27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 ARHGEF10LQ9HCE6 1279 aa27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 GPHNQ9NQX3 736 aaPredicted RBP27.73■■■□□ 2.03
TSPAN4-203ENST00000397397 SPDYE5A6NIY4 337 aa27.72■■■□□ 2.03
TSPAN4-203ENST00000397397 RCSD1Q6JBY9 416 aa27.72■■■□□ 2.03
TSPAN4-203ENST00000397397 SIAH1Q8IUQ4 282 aa27.72■■■□□ 2.03
TSPAN4-203ENST00000397397 TTC14Q96N46 770 aa27.72■■■□□ 2.03
TSPAN4-203ENST00000397397 TBC1D2Q9BYX2 928 aa27.72■■■□□ 2.03
TSPAN4-203ENST00000397397 NOVP48745 357 aa27.71■■■□□ 2.03
TSPAN4-203ENST00000397397 VEGFBP49765 207 aa27.71■■■□□ 2.03
TSPAN4-203ENST00000397397 PPATQ06203 517 aa27.71■■■□□ 2.03
TSPAN4-203ENST00000397397 DEFB115Q30KQ5 88 aa27.71■■■□□ 2.03
TSPAN4-203ENST00000397397 IFIT1BQ5T764 474 aaKnown RBP27.71■■■□□ 2.03
TSPAN4-203ENST00000397397 ACER1Q8TDN7 264 aa27.71■■■□□ 2.03
TSPAN4-203ENST00000397397 OPTNQ96CV9 577 aa27.71■■■□□ 2.03
TSPAN4-203ENST00000397397 OTUD5Q96G74 571 aa27.71■■■□□ 2.03
TSPAN4-203ENST00000397397 WDR18Q9BV38 432 aa27.71■■■□□ 2.03
TSPAN4-203ENST00000397397 ZNF280CQ8ND82 737 aa27.7■■■□□ 2.03
TSPAN4-203ENST00000397397 ANKS1AQ92625 1134 aa27.7■■■□□ 2.03
TSPAN4-203ENST00000397397 TMEM47Q9BQJ4 181 aa27.7■■■□□ 2.03
TSPAN4-203ENST00000397397 LY9Q9HBG7 655 aa27.7■■■□□ 2.03
TSPAN4-203ENST00000397397 TOP1P11387 765 aaKnown RBP27.69■■■□□ 2.02
TSPAN4-203ENST00000397397 ECE1P42892 770 aa27.69■■■□□ 2.02
TSPAN4-203ENST00000397397 SPP2Q13103 211 aa27.69■■■□□ 2.02
TSPAN4-203ENST00000397397 FEZ1Q99689 392 aa27.69■■■□□ 2.02
TSPAN4-203ENST00000397397 SENP2Q9HC62 589 aa27.69■■■□□ 2.02
TSPAN4-203ENST00000397397 AFG3L2Q9Y4W6 797 aa27.69■■■□□ 2.02
TSPAN4-203ENST00000397397 A0A1W2PRG0 241 aa27.68■■■□□ 2.02
TSPAN4-203ENST00000397397 LIFRP42702 1097 aa27.68■■■□□ 2.02
TSPAN4-203ENST00000397397 ZNF157P51786 506 aaPredicted RBP27.68■■■□□ 2.02
TSPAN4-203ENST00000397397 PPIL2Q13356 520 aa27.68■■■□□ 2.02
TSPAN4-203ENST00000397397 RGMBQ6NW40 437 aa27.68■■■□□ 2.02
TSPAN4-203ENST00000397397 NFXL1Q6ZNB6 911 aa27.68■■■□□ 2.02
TSPAN4-203ENST00000397397 LRRC47Q8N1G4 583 aaKnown RBP27.68■■■□□ 2.02
TSPAN4-203ENST00000397397 MKL1Q969V6 931 aa27.68■■■□□ 2.02
TSPAN4-203ENST00000397397 SH2D4AQ9H788 454 aa27.68■■■□□ 2.02
TSPAN4-203ENST00000397397 KAT14Q9H8E8 782 aa27.68■■■□□ 2.02
TSPAN4-203ENST00000397397 TRIM75PA6NK02 468 aa27.67■■■□□ 2.02
TSPAN4-203ENST00000397397 TMTC2Q8N394 836 aa27.67■■■□□ 2.02
TSPAN4-203ENST00000397397 BRF1Q92994 677 aa27.67■■■□□ 2.02
TSPAN4-203ENST00000397397 WNK4Q96J92 1243 aa27.67■■■□□ 2.02
TSPAN4-203ENST00000397397 ALDH8A1Q9H2A2 487 aaPredicted RBP27.67■■■□□ 2.02
TSPAN4-203ENST00000397397 CCDC69A6NI79 296 aa27.67■■■□□ 2.02
TSPAN4-203ENST00000397397 USP17L10C9JJH3 530 aa27.67■■■□□ 2.02
TSPAN4-203ENST00000397397 GJA5P36382 358 aa27.67■■■□□ 2.02
TSPAN4-203ENST00000397397 TOB2Q14106 344 aaPredicted RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms