RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 DDAH1O94760 285 aa27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 GDF11O95390 407 aa27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 TOP1P11387 765 aaKnown RBP27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 APOA5Q6Q788 366 aa27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 SLKQ9H2G2 1235 aaPredicted RBP27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 GPHNQ9NQX3 736 aaPredicted RBP27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 ZNF112Q9UJU3 913 aa27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 ZBTB21Q9ULJ3 1066 aa27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 NAP1L2Q9ULW6 460 aaPredicted RBP27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 SYNPO2Q9UMS6 1093 aa27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 POLR2AP24928 1970 aaKnown RBP27.59■■■□□ 2.01
TSPAN4-202ENST00000397396 GOLGA8BA8MQT2 603 aa27.58■■■□□ 2.01
TSPAN4-202ENST00000397396 PHF20L1A8MW92 1017 aa27.58■■■□□ 2.01
TSPAN4-202ENST00000397396 ZBTB43O43298 467 aa27.58■■■□□ 2.01
TSPAN4-202ENST00000397396 NMT2O60551 498 aa27.58■■■□□ 2.01
TSPAN4-202ENST00000397396 GH2P01242 217 aa27.58■■■□□ 2.01
TSPAN4-202ENST00000397396 HSP90AA1P07900 732 aaKnown RBP27.58■■■□□ 2.01
TSPAN4-202ENST00000397396 PPP2R5BQ15173 497 aa27.58■■■□□ 2.01
TSPAN4-202ENST00000397396 GPBP1L1Q9HC44 474 aaPredicted RBP27.58■■■□□ 2.01
TSPAN4-202ENST00000397396 SSC5DA1L4H1 1573 aa27.58■■■□□ 2
TSPAN4-202ENST00000397396 DHX16O60231 1041 aaKnown RBP27.57■■■□□ 2
TSPAN4-202ENST00000397396 SLURP2P0DP57 97 aa27.57■■■□□ 2
TSPAN4-202ENST00000397396 ICA1Q05084 483 aa27.57■■■□□ 2
TSPAN4-202ENST00000397396 ME3Q16798 604 aa27.57■■■□□ 2
TSPAN4-202ENST00000397396 RCSD1Q6JBY9 416 aa27.57■■■□□ 2
TSPAN4-202ENST00000397396 ZNF654Q8IZM8 581 aa27.57■■■□□ 2
TSPAN4-202ENST00000397396 GLIS2Q9BZE0 524 aaPredicted RBP27.57■■■□□ 2
TSPAN4-202ENST00000397396 NYAP2Q9P242 653 aa27.57■■■□□ 2
TSPAN4-202ENST00000397396 NID2Q14112 1375 aa27.56■■■□□ 2
TSPAN4-202ENST00000397396 PFKFB2O60825 505 aa27.56■■■□□ 2
TSPAN4-202ENST00000397396 PDIA3P30101 505 aaKnown RBP27.56■■■□□ 2
TSPAN4-202ENST00000397396 IREB2P48200 963 aaKnown RBP27.56■■■□□ 2
TSPAN4-202ENST00000397396 PRAMEF18Q5VWM3 479 aa27.56■■■□□ 2
TSPAN4-202ENST00000397396 WRNIP1Q96S55 665 aa27.56■■■□□ 2
TSPAN4-202ENST00000397396 BRPF3Q9ULD4 1205 aa27.56■■■□□ 2
TSPAN4-202ENST00000397396 CCDC196A0A1B0GTZ2 297 aa27.55■■■□□ 2
TSPAN4-202ENST00000397396 METAP2P50579 478 aaKnown RBP eCLIP27.55■■■□□ 2
TSPAN4-202ENST00000397396 CUL4AQ13619 759 aa27.55■■■□□ 2
TSPAN4-202ENST00000397396 RAB3GAP1Q15042 981 aa27.55■■■□□ 2
TSPAN4-202ENST00000397396 INTS4Q96HW7 963 aaKnown RBP27.55■■■□□ 2
TSPAN4-202ENST00000397396 MAP3K14Q99558 947 aa27.55■■■□□ 2
TSPAN4-202ENST00000397396 SH2D4AQ9H788 454 aa27.55■■■□□ 2
TSPAN4-202ENST00000397396 ARHGEF10LQ9HCE6 1279 aa27.55■■■□□ 2
TSPAN4-202ENST00000397396 POTEIP0CG38 1075 aa27.54■■■□□ 2
TSPAN4-202ENST00000397396 POTEJP0CG39 1038 aa27.54■■■□□ 2
TSPAN4-202ENST00000397396 SEPT2Q15019 361 aa27.54■■■□□ 2
TSPAN4-202ENST00000397396 NOL9Q5SY16 702 aaKnown RBP27.54■■■□□ 2
TSPAN4-202ENST00000397396 MAP1SQ66K74 1059 aaPredicted RBP27.54■■■□□ 2
TSPAN4-202ENST00000397396 SCYL3Q8IZE3 742 aa27.54■■■□□ 2
TSPAN4-202ENST00000397396 PNMA1Q8ND90 353 aa27.54■■■□□ 2
TSPAN4-202ENST00000397396 GTF3C6Q969F1 213 aa27.54■■■□□ 2
TSPAN4-202ENST00000397396 KLRG1Q96E93 195 aa27.54■■■□□ 2
TSPAN4-202ENST00000397396 TMEM47Q9BQJ4 181 aa27.54■■■□□ 2
TSPAN4-202ENST00000397396 LARP6Q9BRS8 491 aaKnown RBP27.54■■■□□ 2
TSPAN4-202ENST00000397396 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.54■■■□□ 2
TSPAN4-202ENST00000397396 GOLGA8AA7E2F4 631 aa27.53■■■□□ 2
TSPAN4-202ENST00000397396 RRP1BQ14684 758 aaKnown RBP27.53■■■□□ 2
TSPAN4-202ENST00000397396 CHADLQ6NUI6 762 aa27.53■■■□□ 2
TSPAN4-202ENST00000397396 CPLX2Q6PUV4 134 aaKnown RBP27.53■■■□□ 2
TSPAN4-202ENST00000397396 MICU3Q86XE3 530 aa27.53■■■□□ 2
TSPAN4-202ENST00000397396 MKL1Q969V6 931 aa27.53■■■□□ 2
TSPAN4-202ENST00000397396 PICK1Q9NRD5 415 aa27.53■■■□□ 2
TSPAN4-202ENST00000397396 LARGE1O95461 756 aa27.52■■■□□ 2
TSPAN4-202ENST00000397396 ARMC9Q7Z3E5 817 aa27.52■■■□□ 2
TSPAN4-202ENST00000397396 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.52■■■□□ 21e-7■■■□□ 19.2
TSPAN4-202ENST00000397396 SENP2Q9HC62 589 aa27.52■■■□□ 2
TSPAN4-202ENST00000397396 RBM28Q9NW13 759 aaKnown RBP27.52■■■□□ 2
TSPAN4-202ENST00000397396 CLIP2Q9UDT6 1046 aa27.52■■■□□ 2
TSPAN4-202ENST00000397396 DOCK1Q14185 1865 aa27.52■■■□□ 2
TSPAN4-202ENST00000397396 KIF5BP33176 963 aa27.51■■□□□ 1.99
TSPAN4-202ENST00000397396 GUCY1A2P33402 732 aa27.51■■□□□ 1.99
TSPAN4-202ENST00000397396 FKBP1BP68106 108 aa27.51■■□□□ 1.99
TSPAN4-202ENST00000397396 STK3Q13188 491 aa27.51■■□□□ 1.99
TSPAN4-202ENST00000397396 MAP3K11Q16584 847 aa27.51■■□□□ 1.99
TSPAN4-202ENST00000397396 CTCFLQ8NI51 663 aaPredicted RBP27.51■■□□□ 1.99
TSPAN4-202ENST00000397396 AS3MTQ9HBK9 375 aa27.51■■□□□ 1.99
TSPAN4-202ENST00000397396 ATAD5Q96QE3 1844 aa27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 UNCXA6NJT0 531 aa27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 USP2O75604 605 aaPredicted RBP27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 CDKL5O76039 1030 aa27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 EEF2P13639 858 aaKnown RBP27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 MAP3K9P80192 1104 aa27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 ATP2B2Q01814 1243 aa27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 TROAPQ12815 778 aa27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 CCDC83Q8IWF9 413 aa27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 NUP133Q8WUM0 1156 aa27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 LLPHQ9BRT6 129 aaKnown RBP27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 CSADQ9Y600 493 aa27.5■■□□□ 1.99
TSPAN4-202ENST00000397396 USP17L5A8MUK1 530 aa27.49■■□□□ 1.99
TSPAN4-202ENST00000397396 CPLX1O14810 134 aa27.49■■□□□ 1.99
TSPAN4-202ENST00000397396 INPP5BP32019 993 aa27.49■■□□□ 1.99
TSPAN4-202ENST00000397396 SCRN1Q12765 414 aa27.49■■□□□ 1.99
TSPAN4-202ENST00000397396 TTLL12Q14166 644 aaPredicted RBP27.49■■□□□ 1.99
TSPAN4-202ENST00000397396 RTN1Q16799 776 aa27.49■■□□□ 1.99
TSPAN4-202ENST00000397396 HPS5Q9UPZ3 1129 aa27.49■■□□□ 1.99
TSPAN4-202ENST00000397396 GNAQP50148 359 aa27.48■■□□□ 1.99
TSPAN4-202ENST00000397396 ANKRD13AQ8IZ07 590 aa27.48■■□□□ 1.99
TSPAN4-202ENST00000397396 FANCBQ8NB91 859 aa27.48■■□□□ 1.99
TSPAN4-202ENST00000397396 CCT2P78371 535 aaKnown RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms