RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ASCC2Q9H1I8 757 aaPredicted RBP17.43■□□□□ 0.38
SEC13-208ENST00000397109 PATL2C9JE40 543 aaKnown RBP17.42■□□□□ 0.38
SEC13-208ENST00000397109 M0R2C6 588 aa17.42■□□□□ 0.38
SEC13-208ENST00000397109 FMNL1O95466 1100 aaPredicted RBP17.42■□□□□ 0.38
SEC13-208ENST00000397109 FCGRTP55899 365 aa17.42■□□□□ 0.38
SEC13-208ENST00000397109 SEPT2Q15019 361 aa17.42■□□□□ 0.38
SEC13-208ENST00000397109 CENPQQ7L2Z9 268 aaPredicted RBP17.42■□□□□ 0.38
SEC13-208ENST00000397109 SLC44A5Q8NCS7 719 aa17.42■□□□□ 0.38
SEC13-208ENST00000397109 C12orf42Q96LP6 360 aa17.42■□□□□ 0.38
SEC13-208ENST00000397109 NACAP1Q9BZK3 213 aa17.42■□□□□ 0.38
SEC13-208ENST00000397109 EMILIN3Q9NT22 766 aa17.42■□□□□ 0.38
SEC13-208ENST00000397109 CYP2D7A0A087X1C5 515 aa17.41■□□□□ 0.38
SEC13-208ENST00000397109 APPP05067 770 aa17.41■□□□□ 0.38
SEC13-208ENST00000397109 GUCY1A2P33402 732 aa17.41■□□□□ 0.38
SEC13-208ENST00000397109 RGS19P49795 217 aa17.41■□□□□ 0.38
SEC13-208ENST00000397109 FAM110CQ1W6H9 321 aa17.41■□□□□ 0.38
SEC13-208ENST00000397109 TRIM47Q96LD4 638 aa17.41■□□□□ 0.38
SEC13-208ENST00000397109 OSBPL3Q9H4L5 887 aa17.41■□□□□ 0.38
SEC13-208ENST00000397109 MYH8P13535 1937 aa17.4■□□□□ 0.38
SEC13-208ENST00000397109 TDO2P48775 406 aa17.4■□□□□ 0.38
SEC13-208ENST00000397109 NBPF11Q86T75 865 aa17.4■□□□□ 0.38
SEC13-208ENST00000397109 ANKRD13CQ8N6S4 541 aa17.4■□□□□ 0.38
SEC13-208ENST00000397109 GTF3C2Q8WUA4 911 aaPredicted RBP17.4■□□□□ 0.38
SEC13-208ENST00000397109 SRRDQ9UH36 339 aa17.4■□□□□ 0.38
SEC13-208ENST00000397109 PTCH2Q9Y6C5 1203 aa17.4■□□□□ 0.38
SEC13-208ENST00000397109 PLEKHM2Q8IWE5 1019 aa17.39■□□□□ 0.37
SEC13-208ENST00000397109 IFNL3Q8IZI9 196 aa17.39■□□□□ 0.37
SEC13-208ENST00000397109 ACER1Q8TDN7 264 aa17.39■□□□□ 0.37
SEC13-208ENST00000397109 ARMC5Q96C12 935 aa17.39■□□□□ 0.37
SEC13-208ENST00000397109 SEC62Q99442 399 aaKnown RBP17.39■□□□□ 0.37
SEC13-208ENST00000397109 ZNF287Q9HBT7 754 aa17.39■□□□□ 0.37
SEC13-208ENST00000397109 MINDY4BA8MYZ0 360 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 TRIM6-TRIM34B2RNG4 842 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 USP17L15C9J2P7 530 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 USP17L13C9JLJ4 530 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 USP17L11C9JVI0 530 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 USP17L18D6R9N7 530 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 USP17L22D6RA61 530 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 USP17L17D6RBQ6 530 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 USP17L19D6RCP7 530 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 USP17L20D6RJB6 530 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 AKR1B1P15121 316 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 CTGFP29279 349 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 USP17L24Q0WX57 530 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 ZYXQ15942 572 aaKnown RBP17.38■□□□□ 0.37
SEC13-208ENST00000397109 SLC9C1Q4G0N8 1177 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 P2RX7Q99572 595 aaKnown RBP17.38■□□□□ 0.37
SEC13-208ENST00000397109 SH2D4AQ9H788 454 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 ARHGEF10LQ9HCE6 1279 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 EPB41L4AQ9HCS5 686 aaPredicted RBP17.38■□□□□ 0.37
SEC13-208ENST00000397109 HELLSQ9NRZ9 838 aa17.38■□□□□ 0.37
SEC13-208ENST00000397109 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
SEC13-208ENST00000397109 HERVK_113P62684 666 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 NAPBQ9H115 298 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 MKNK2Q9HBH9 465 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 MORF4L1Q9UBU8 362 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 MGAMO43451 1857 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 ROBO3Q96MS0 1386 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 MYPNQ86TC9 1320 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 SMIM22K7EJ46 135 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 TNPO2O14787 897 aaKnown RBP17.37■□□□□ 0.37
SEC13-208ENST00000397109 SOX10P56693 466 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 ICA1Q05084 483 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 RAET1EQ8TD07 263 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 RILPL2Q969X0 211 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 COA7Q96BR5 231 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 KANSL2Q9H9L4 492 aa17.37■□□□□ 0.37
SEC13-208ENST00000397109 ZSWIM8A7E2V4 1837 aa17.36■□□□□ 0.37
SEC13-208ENST00000397109 SLC3A2P08195 630 aaKnown RBP17.36■□□□□ 0.37
SEC13-208ENST00000397109 VCAM1P19320 739 aa17.36■□□□□ 0.37
SEC13-208ENST00000397109 CATSPERGQ6ZRH7 1159 aa17.36■□□□□ 0.37
SEC13-208ENST00000397109 TMX2Q9Y320 296 aa17.36■□□□□ 0.37
SEC13-208ENST00000397109 KIAA0100Q14667 2235 aaKnown RBP17.36■□□□□ 0.37
SEC13-208ENST00000397109 A0A1W2PRG0 241 aa17.35■□□□□ 0.37
SEC13-208ENST00000397109 MCMDC2Q4G0Z9 681 aa17.35■□□□□ 0.37
SEC13-208ENST00000397109 GPRC5AQ8NFJ5 357 aa17.35■□□□□ 0.37
SEC13-208ENST00000397109 LPAR1Q92633 364 aa17.35■□□□□ 0.37
SEC13-208ENST00000397109 ZNF333Q96JL9 665 aa17.35■□□□□ 0.37
SEC13-208ENST00000397109 RASA1P20936 1047 aa17.34■□□□□ 0.37
SEC13-208ENST00000397109 MLLT1Q03111 559 aaPredicted RBP17.34■□□□□ 0.37
SEC13-208ENST00000397109 PRKCZQ05513 592 aa17.34■□□□□ 0.37
SEC13-208ENST00000397109 PDE4BQ07343 736 aa17.34■□□□□ 0.37
SEC13-208ENST00000397109 DOCK3Q8IZD9 2030 aa17.34■□□□□ 0.37
SEC13-208ENST00000397109 ZNF444Q8N0Y2 327 aaPredicted RBP17.34■□□□□ 0.37
SEC13-208ENST00000397109 RPAP3Q9H6T3 665 aaPredicted RBP17.34■□□□□ 0.37
SEC13-208ENST00000397109 RABGAP1Q9Y3P9 1069 aa17.34■□□□□ 0.37
SEC13-208ENST00000397109 GRK4P32298 578 aa17.33■□□□□ 0.37
SEC13-208ENST00000397109 IRF5Q13568 498 aa17.33■□□□□ 0.37
SEC13-208ENST00000397109 ALX1Q15699 326 aa17.33■□□□□ 0.37
SEC13-208ENST00000397109 LBX2Q6XYB7 198 aa17.33■□□□□ 0.37
SEC13-208ENST00000397109 CCDC129Q6ZRS4 1044 aa17.33■□□□□ 0.37
SEC13-208ENST00000397109 SIAH1Q8IUQ4 282 aa17.33■□□□□ 0.37
SEC13-208ENST00000397109 STK11IPQ8N1F8 1099 aa17.33■□□□□ 0.37
SEC13-208ENST00000397109 TMEM106CQ9BVX2 250 aa17.33■□□□□ 0.37
SEC13-208ENST00000397109 VCPKMTQ9H867 229 aa17.33■□□□□ 0.37
SEC13-208ENST00000397109 RBPJLQ9UBG7 517 aa17.33■□□□□ 0.37
SEC13-208ENST00000397109 HTTP42858 3142 aa17.32■□□□□ 0.36
SEC13-208ENST00000397109 HIP1O00291 1037 aa17.32■□□□□ 0.36
SEC13-208ENST00000397109 EEF2P13639 858 aaKnown RBP17.32■□□□□ 0.36
SEC13-208ENST00000397109 FLT3LGP49771 235 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms