RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 EPS15P42566 896 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 RASA3Q14644 834 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 NTRK3Q16288 839 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 KAT14Q9H8E8 782 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 NCOA5Q9HCD5 579 aaKnown RBP15.89■□□□□ 0.13
MCF2L-209ENST00000397036 RBM28Q9NW13 759 aaKnown RBP15.89■□□□□ 0.13
MCF2L-209ENST00000397036 HACL1Q9UJ83 578 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 PPP2R3BQ9Y5P8 575 aa15.89■□□□□ 0.13
MCF2L-209ENST00000397036 GLTPD2A6NH11 291 aa15.88■□□□□ 0.13
MCF2L-209ENST00000397036 BRD1O95696 1058 aa15.88■□□□□ 0.13
MCF2L-209ENST00000397036 ADD1P35611 737 aaKnown RBP15.88■□□□□ 0.13
MCF2L-209ENST00000397036 RTN1Q16799 776 aa15.88■□□□□ 0.13
MCF2L-209ENST00000397036 CLEC17AQ6ZS10 378 aa15.88■□□□□ 0.13
MCF2L-209ENST00000397036 MICU3Q86XE3 530 aa15.88■□□□□ 0.13
MCF2L-209ENST00000397036 MKL1Q969V6 931 aa15.88■□□□□ 0.13
MCF2L-209ENST00000397036 HOOK2Q96ED9 719 aa15.88■□□□□ 0.13
MCF2L-209ENST00000397036 TEPSINQ96N21 525 aa15.88■□□□□ 0.13
MCF2L-209ENST00000397036 GINM1Q9NU53 330 aa15.88■□□□□ 0.13
MCF2L-209ENST00000397036 SYNPO2Q9UMS6 1093 aa15.88■□□□□ 0.13
MCF2L-209ENST00000397036 PTPDC1A2A3K4 754 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 SYT1P21579 422 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 CDC27P30260 824 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 TMEM179Q6ZVK1 233 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 PNMA1Q8ND90 353 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 TRPM4Q8TD43 1214 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 CEP95Q96GE4 821 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 TMEM47Q9BQJ4 181 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 TMEM39BQ9GZU3 492 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 DEFB129Q9H1M3 183 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 KANSL2Q9H9L4 492 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.87■□□□□ 0.13
MCF2L-209ENST00000397036 NYAP2Q9P242 653 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 WDR33Q9C0J8 1336 aaKnown RBP15.87■□□□□ 0.13
MCF2L-209ENST00000397036 STK36Q9NRP7 1315 aa15.87■□□□□ 0.13
MCF2L-209ENST00000397036 JAK2O60674 1132 aa15.86■□□□□ 0.13
MCF2L-209ENST00000397036 TTLL1O95922 423 aa15.86■□□□□ 0.13
MCF2L-209ENST00000397036 KIF5BP33176 963 aa15.86■□□□□ 0.13
MCF2L-209ENST00000397036 GNAQP50148 359 aa15.86■□□□□ 0.13
MCF2L-209ENST00000397036 HIRAP54198 1017 aaPredicted RBP15.86■□□□□ 0.13
MCF2L-209ENST00000397036 LARP1BQ659C4 914 aaKnown RBP15.86■□□□□ 0.13
MCF2L-209ENST00000397036 ZC3H15Q8WU90 426 aaKnown RBP15.86■□□□□ 0.13
MCF2L-209ENST00000397036 ZDHHC9Q9Y397 364 aa15.86■□□□□ 0.13
MCF2L-209ENST00000397036 STX6O43752 255 aa15.85■□□□□ 0.13
MCF2L-209ENST00000397036 SMARCA1P28370 1054 aa15.85■□□□□ 0.13
MCF2L-209ENST00000397036 USP50Q70EL3 339 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-209ENST00000397036 FAM184AQ8NB25 1140 aa15.85■□□□□ 0.13
MCF2L-209ENST00000397036 CTCFLQ8NI51 663 aaPredicted RBP15.85■□□□□ 0.13
MCF2L-209ENST00000397036 CABP5Q9NP86 173 aa15.85■□□□□ 0.13
MCF2L-209ENST00000397036 STX8Q9UNK0 236 aa15.85■□□□□ 0.13
MCF2L-209ENST00000397036 SRCAPQ6ZRS2 3230 aa15.85■□□□□ 0.13
MCF2L-209ENST00000397036 FDPSP14324 419 aaKnown RBP15.84■□□□□ 0.13
MCF2L-209ENST00000397036 ABCB5Q2M3G0 1257 aa15.84■□□□□ 0.13
MCF2L-209ENST00000397036 NUP133Q8WUM0 1156 aa15.84■□□□□ 0.13
MCF2L-209ENST00000397036 LZTS2Q9BRK4 669 aa15.84■□□□□ 0.13
MCF2L-209ENST00000397036 MYL10Q9BUA6 226 aa15.84■□□□□ 0.13
MCF2L-209ENST00000397036 ORC3Q9UBD5 711 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-209ENST00000397036 SIPA1L1O43166 1804 aa15.84■□□□□ 0.13
MCF2L-209ENST00000397036 RXRAP19793 462 aa15.84■□□□□ 0.13
MCF2L-209ENST00000397036 FUT2Q10981 343 aa15.84■□□□□ 0.13
MCF2L-209ENST00000397036 GRM4Q14833 912 aa15.84■□□□□ 0.13
MCF2L-209ENST00000397036 ANGEL2Q5VTE6 544 aaKnown RBP15.84■□□□□ 0.13
MCF2L-209ENST00000397036 TMTC3Q6ZXV5 915 aa15.84■□□□□ 0.13
MCF2L-209ENST00000397036 NBPF11Q86T75 865 aa15.84■□□□□ 0.13
MCF2L-209ENST00000397036 RNF26Q9BY78 433 aaPredicted RBP15.84■□□□□ 0.13
MCF2L-209ENST00000397036 MTMR6Q9Y217 621 aa15.84■□□□□ 0.13
MCF2L-209ENST00000397036 IQCA1LA6NCM1 817 aa15.83■□□□□ 0.12
MCF2L-209ENST00000397036 PALM3A6NDB9 673 aaPredicted RBP15.83■□□□□ 0.12
MCF2L-209ENST00000397036 FMNL1O95466 1100 aaPredicted RBP15.83■□□□□ 0.12
MCF2L-209ENST00000397036 SNHG28P0DPA3 235 aa15.83■□□□□ 0.12
MCF2L-209ENST00000397036 ZSCAN22P10073 491 aaPredicted RBP15.83■□□□□ 0.12
MCF2L-209ENST00000397036 GUCY1A2P33402 732 aa15.83■□□□□ 0.12
MCF2L-209ENST00000397036 SSRP1Q08945 709 aaKnown RBP15.83■□□□□ 0.12
MCF2L-209ENST00000397036 PKP1Q13835 747 aa15.83■□□□□ 0.12
MCF2L-209ENST00000397036 TRIM22Q8IYM9 498 aa15.83■□□□□ 0.12
MCF2L-209ENST00000397036 WASF1Q92558 559 aa15.83■□□□□ 0.12
MCF2L-209ENST00000397036 TNPO1Q92973 898 aaKnown RBP15.83■□□□□ 0.12
MCF2L-209ENST00000397036 RBM27Q9P2N5 1060 aaKnown RBP15.83■□□□□ 0.12
MCF2L-209ENST00000397036 ASTN2O75129 1339 aaPredicted RBP15.82■□□□□ 0.12
MCF2L-209ENST00000397036 FAM196BA6NMK8 535 aa15.82■□□□□ 0.12
MCF2L-209ENST00000397036 PHF20L1A8MW92 1017 aa15.82■□□□□ 0.12
MCF2L-209ENST00000397036 PRPF3O43395 683 aaKnown RBP15.82■□□□□ 0.12
MCF2L-209ENST00000397036 SLURP2P0DP57 97 aa15.82■□□□□ 0.12
MCF2L-209ENST00000397036 CAP2P40123 477 aa15.82■□□□□ 0.12
MCF2L-209ENST00000397036 SUPT20HL1Q3ZLR7 823 aa15.82■□□□□ 0.12
MCF2L-209ENST00000397036 DCAF15Q66K64 600 aa15.82■□□□□ 0.12
MCF2L-209ENST00000397036 RAB11FIP4Q86YS3 637 aa15.82■□□□□ 0.12
MCF2L-209ENST00000397036 DDX11Q96FC9 970 aa15.82■□□□□ 0.12
MCF2L-209ENST00000397036 GGA3Q9NZ52 723 aa15.82■□□□□ 0.12
MCF2L-209ENST00000397036 CLIP2Q9UDT6 1046 aa15.82■□□□□ 0.12
MCF2L-209ENST00000397036 ZNF112Q9UJU3 913 aa15.82■□□□□ 0.12
MCF2L-209ENST00000397036 GREB1LQ9C091 1923 aaPredicted RBP15.82■□□□□ 0.12
MCF2L-209ENST00000397036 MPHOSPH10O00566 681 aaKnown RBP15.81■□□□□ 0.12
MCF2L-209ENST00000397036 GH2P01242 217 aa15.81■□□□□ 0.12
MCF2L-209ENST00000397036 RRP1BQ14684 758 aaKnown RBP15.81■□□□□ 0.12
MCF2L-209ENST00000397036 SIAH1Q8IUQ4 282 aa15.81■□□□□ 0.12
MCF2L-209ENST00000397036 CDAN1Q8IWY9 1227 aa15.81■□□□□ 0.12
MCF2L-209ENST00000397036 CCDC144CPQ8IYA2 1237 aa15.81■□□□□ 0.12
MCF2L-209ENST00000397036 MAD2L2Q9UI95 211 aa15.81■□□□□ 0.12
MCF2L-209ENST00000397036 CTNND1O60716 968 aaKnown RBP15.8■□□□□ 0.12
MCF2L-209ENST00000397036 DEXIO95424 95 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms