RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 MRPS25P82663 173 aaKnown RBP11.17□□□□□ -0.62
TRIM39-203ENST00000396547 DNAJC21Q5F1R6 531 aaKnown RBP11.17□□□□□ -0.62
TRIM39-203ENST00000396547 TMEM67Q5HYA8 995 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 MED15Q96RN5 788 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 NUP88Q99567 741 aaPredicted RBP11.17□□□□□ -0.62
TRIM39-203ENST00000396547 HDAC6Q9UBN7 1215 aa11.17□□□□□ -0.62
TRIM39-203ENST00000396547 ANGEL1Q9UNK9 670 aaKnown RBP11.17□□□□□ -0.62
TRIM39-203ENST00000396547 SAFBQ15424 915 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRIM39-203ENST00000396547 LRRC31Q6UY01 552 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 GPIHBP1Q8IV16 184 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 EFCC1Q9HA90 598 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 ATG3Q9NT62 314 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 JRKLQ9Y4A0 524 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 PCDHB6Q9Y5E3 794 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 PPP6R2O75170 966 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
TRIM39-203ENST00000396547 DIS3L2Q8IYB7 885 aaKnown RBP11.16□□□□□ -0.62
TRIM39-203ENST00000396547 XAGE2Q96GT9 111 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 MAP3K14Q99558 947 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 LOC102724159A0A0B4J2E5 919 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 EYA2O00167 538 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 IFIT3O14879 490 aaKnown RBP11.16□□□□□ -0.62
TRIM39-203ENST00000396547 N4BP3O15049 544 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 FOXP2O15409 715 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 RNF40O75150 1001 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
TRIM39-203ENST00000396547 FXR1P51114 621 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRIM39-203ENST00000396547 FOXO4P98177 505 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 SSRP1Q08945 709 aaKnown RBP11.16□□□□□ -0.62
TRIM39-203ENST00000396547 NR1I3Q14994 352 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 PWP2Q15269 919 aaKnown RBP11.16□□□□□ -0.62
TRIM39-203ENST00000396547 ICE2Q659A1 982 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 TBC1D10CQ8IV04 446 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 NAPGQ99747 312 aaPredicted RBP11.16□□□□□ -0.62
TRIM39-203ENST00000396547 CABP5Q9NP86 173 aa11.16□□□□□ -0.62
TRIM39-203ENST00000396547 SNRPA1P09661 255 aaKnown RBP11.15□□□□□ -0.62
TRIM39-203ENST00000396547 FILIP1LQ4L180 1135 aa11.15□□□□□ -0.62
TRIM39-203ENST00000396547 APOA5Q6Q788 366 aa11.15□□□□□ -0.62
TRIM39-203ENST00000396547 MLKLQ8NB16 471 aa11.15□□□□□ -0.62
TRIM39-203ENST00000396547 EEF2KMTQ96G04 330 aa11.15□□□□□ -0.62
TRIM39-203ENST00000396547 DACH1Q9UI36 760 aa11.15□□□□□ -0.62
TRIM39-203ENST00000396547 RANBP6O60518 1105 aaKnown RBP11.15□□□□□ -0.62
TRIM39-203ENST00000396547 CDKL5O76039 1030 aa11.15□□□□□ -0.62
TRIM39-203ENST00000396547 LIG3P49916 1009 aa11.15□□□□□ -0.62
TRIM39-203ENST00000396547 CTDSPL2Q05D32 466 aa11.15□□□□□ -0.62
TRIM39-203ENST00000396547 CCDC57Q2TAC2 916 aa11.15□□□□□ -0.62
TRIM39-203ENST00000396547 RABL6Q3YEC7 729 aaPredicted RBP11.15□□□□□ -0.62
TRIM39-203ENST00000396547 ENOX1Q8TC92 643 aaKnown RBP11.15□□□□□ -0.62
TRIM39-203ENST00000396547 EPSTI1Q96J88 318 aa11.15□□□□□ -0.62
TRIM39-203ENST00000396547 PSD3Q9NYI0 1048 aa11.15□□□□□ -0.62
TRIM39-203ENST00000396547 KDM3BQ7LBC6 1761 aa11.15□□□□□ -0.63
TRIM39-203ENST00000396547 A1BGP04217 495 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 IBSPP21815 317 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-203ENST00000396547 ZCRB1Q8TBF4 217 aaKnown RBP11.14□□□□□ -0.63
TRIM39-203ENST00000396547 SMARCC1Q92922 1105 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-203ENST00000396547 CSRNP2Q9H175 543 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 BLZF1Q9H2G9 400 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 SLC52A2Q9HAB3 445 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 POLD4Q9HCU8 107 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 SLC12A7Q9Y666 1083 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 ZMYM6O95789 1325 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
TRIM39-203ENST00000396547 ZNF18P17022 549 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 TATP17735 454 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-203ENST00000396547 MAGEA9P43362 315 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 CTR9Q6PD62 1173 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 CAGE1Q8TC20 777 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 OXER1Q8TDS5 423 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 CWC25Q9NXE8 425 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-203ENST00000396547 TAB2Q9NYJ8 693 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 FAM205CA6NFA0 338 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 RNF225M0QZC1 329 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-203ENST00000396547 BAG6P46379 1132 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 MDM2Q00987 491 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-203ENST00000396547 NOSTRINQ8IVI9 506 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 CCDC148Q8NFR7 591 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 AFAP1L1Q8TED9 768 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 EHD4Q9H223 541 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 ACBD3Q9H3P7 528 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 DEF6Q9H4E7 631 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 MYO6Q9UM54 1294 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 CTNND2Q9UQB3 1225 aa11.14□□□□□ -0.63
TRIM39-203ENST00000396547 MATR3P43243 847 aaKnown RBP eCLIP11.13□□□□□ -0.63
TRIM39-203ENST00000396547 TOB1P50616 345 aaPredicted RBP11.13□□□□□ -0.63
TRIM39-203ENST00000396547 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.13□□□□□ -0.63
TRIM39-203ENST00000396547 APPBP2Q92624 585 aa11.13□□□□□ -0.63
TRIM39-203ENST00000396547 UBN2Q6ZU65 1347 aa11.13□□□□□ -0.63
TRIM39-203ENST00000396547 CCT5P48643 541 aa11.13□□□□□ -0.63
TRIM39-203ENST00000396547 PLCD1P51178 756 aa11.13□□□□□ -0.63
TRIM39-203ENST00000396547 MORC3Q14149 939 aa11.13□□□□□ -0.63
TRIM39-203ENST00000396547 FAM71BQ8TC56 605 aa11.13□□□□□ -0.63
TRIM39-203ENST00000396547 CHP1Q99653 195 aa11.13□□□□□ -0.63
TRIM39-203ENST00000396547 SYNRGQ9UMZ2 1314 aa11.13□□□□□ -0.63
TRIM39-203ENST00000396547 KRT9P35527 623 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 CABP4P57796 275 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 CRACR2AQ9BSW2 395 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 GBP3Q9H0R5 595 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 TJP1Q07157 1748 aa11.12□□□□□ -0.63
TRIM39-203ENST00000396547 MFAP3LO75121 409 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms