RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 DYNLL1P63167 89 aaKnown RBP10.63□□□□□ -0.71
NDE1-201ENST00000396354 SSRP1Q08945 709 aaKnown RBP10.63□□□□□ -0.71
NDE1-201ENST00000396354 SAFBQ15424 915 aaKnown RBP eCLIP10.63□□□□□ -0.71
NDE1-201ENST00000396354 NTRK3Q16288 839 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 TOGARAM2Q6ZUX3 1019 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 NYAP1Q6ZVC0 841 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 TXNRD3Q86VQ6 643 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 METTL16Q86W50 562 aaKnown RBP10.63□□□□□ -0.71
NDE1-201ENST00000396354 KRT222Q8N1A0 295 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 SHISA4Q96DD7 197 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 MINPP1Q9UNW1 487 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 TAF1LQ8IZX4 1826 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 FMR1Q06787 632 aaKnown RBP eCLIP10.63□□□□□ -0.71
NDE1-201ENST00000396354 NCAPHQ15003 741 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 LRRFIP1Q32MZ4 808 aaKnown RBP10.63□□□□□ -0.71
NDE1-201ENST00000396354 SARM1Q6SZW1 724 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 EPSTI1Q96J88 318 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 WDR24Q96S15 920 aa10.63□□□□□ -0.71
NDE1-201ENST00000396354 MYH13Q9UKX3 1938 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 CLCN6P51797 869 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 DHX8Q14562 1220 aaKnown RBP10.62□□□□□ -0.71
NDE1-201ENST00000396354 SLC39A14Q15043 492 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 MFSD6Q6ZSS7 791 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 POLR3EQ9NVU0 708 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 ZNF446Q9NWS9 450 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 DDX41Q9UJV9 622 aaKnown RBP10.62□□□□□ -0.71
NDE1-201ENST00000396354 ERICH2A1L162 156 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 PATL2C9JE40 543 aaKnown RBP10.62□□□□□ -0.71
NDE1-201ENST00000396354 AKAP17AQ02040 695 aaKnown RBP10.62□□□□□ -0.71
NDE1-201ENST00000396354 ZNF174Q15697 407 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 FAM84BQ96KN1 310 aaPredicted RBP10.62□□□□□ -0.71
NDE1-201ENST00000396354 UIMC1Q96RL1 719 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 UBAC1Q9BSL1 405 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 MYH2Q9UKX2 1941 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 TULP1O00294 542 aaPredicted RBP10.62□□□□□ -0.71
NDE1-201ENST00000396354 GNPATO15228 680 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 PHACTR2O75167 634 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 CAVIN2O95810 425 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 BMP6P22004 513 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 CMA1P23946 247 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 PPARDQ03181 441 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 WWC2Q6AWC2 1192 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 NEK11Q8NG66 645 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 CCDC12Q8WUD4 166 aaPredicted RBP10.62□□□□□ -0.71
NDE1-201ENST00000396354 ERO1AQ96HE7 468 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 GDAP1L1Q96MZ0 367 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 TFCP2L1Q9NZI6 479 aa10.62□□□□□ -0.71
NDE1-201ENST00000396354 NHSQ6T4R5 1651 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 ZMYM6O95789 1325 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 FAM170AA1A519 330 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 SOWAHDA6NJG2 315 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 YEATS4O95619 227 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 SF3B3Q15393 1217 aaKnown RBP10.61□□□□□ -0.71
NDE1-201ENST00000396354 BRAPQ7Z569 592 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 TRIM22Q8IYM9 498 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 JMYQ8N9B5 988 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 RIOK1Q9BRS2 568 aaKnown RBP10.61□□□□□ -0.71
NDE1-201ENST00000396354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.61□□□□□ -0.711e-7■■□□□ 11.9
NDE1-201ENST00000396354 CNTNAP4Q9C0A0 1308 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 FANCGO15287 622 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 TEX33O43247 280 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 NEMFO60524 1076 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 NMT2O60551 498 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 GTF2E1P29083 439 aaPredicted RBP10.61□□□□□ -0.71
NDE1-201ENST00000396354 MAP3K12Q12852 859 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 WTAPQ15007 396 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 ALX1Q15699 326 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 RTN1Q16799 776 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 FKBP15Q5T1M5 1219 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 FAM196AQ6ZSG2 479 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 CCDC150Q8NCX0 1101 aa10.61□□□□□ -0.71
NDE1-201ENST00000396354 SMARCC1Q92922 1105 aaPredicted RBP10.61□□□□□ -0.71
NDE1-201ENST00000396354 VWA3AA6NCI4 1184 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 VGLL3A8MV65 326 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 GTPBP6O43824 516 aaPredicted RBP10.6□□□□□ -0.71
NDE1-201ENST00000396354 TM4SF1P30408 202 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 MCM6Q14566 821 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 GPR101Q96P66 508 aaPredicted RBP10.6□□□□□ -0.71
NDE1-201ENST00000396354 BAG1Q99933 345 aaPredicted RBP10.6□□□□□ -0.71
NDE1-201ENST00000396354 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.6□□□□□ -0.71
NDE1-201ENST00000396354 TFR2Q9UP52 801 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 CYP7A1P22680 504 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 CDC25BP30305 580 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 ETF1P62495 437 aaKnown RBP10.6□□□□□ -0.71
NDE1-201ENST00000396354 TMCO3Q6UWJ1 677 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 CLEC4GQ6UXB4 293 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 KRBA2Q6ZNG9 492 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 KRI1Q8N9T8 703 aaKnown RBP10.6□□□□□ -0.71
NDE1-201ENST00000396354 SMARCE1Q969G3 411 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 LRRC4BQ9NT99 713 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 V9GY48 417 aaPredicted RBP10.6□□□□□ -0.71
NDE1-201ENST00000396354 WDR19Q8NEZ3 1342 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 LY75O60449 1722 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 A0A1W2PQ27 194 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 A0A1W2PQ64 194 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 A0A1W2PQD8 194 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 RHOXF2BP0C7M4 288 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 FAM47AQ5JRC9 791 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 ANKRD18AQ8IVF6 992 aa10.6□□□□□ -0.71
NDE1-201ENST00000396354 ARHGEF1Q92888 912 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms