RNA–Protein interactions for RNA: ENST00000396076.5

LDHB-203, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LDHB, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-203ENST00000396076 KAT14Q9H8E8 782 aa27.39■■□□□ 1.98
LDHB-203ENST00000396076 FAM217BQ9NTX9 383 aaPredicted RBP27.39■■□□□ 1.98
LDHB-203ENST00000396076 STX8Q9UNK0 236 aa27.39■■□□□ 1.98
LDHB-203ENST00000396076 MPHOSPH10O00566 681 aaKnown RBP27.38■■□□□ 1.97
LDHB-203ENST00000396076 DDAH1O94760 285 aa27.38■■□□□ 1.97
LDHB-203ENST00000396076 CDC27P30260 824 aa27.38■■□□□ 1.97
LDHB-203ENST00000396076 ADD1P35611 737 aaKnown RBP27.38■■□□□ 1.97
LDHB-203ENST00000396076 MAP3K10Q02779 954 aa27.38■■□□□ 1.97
LDHB-203ENST00000396076 TROAPQ12815 778 aa27.38■■□□□ 1.97
LDHB-203ENST00000396076 FANCBQ8NB91 859 aa27.38■■□□□ 1.97
LDHB-203ENST00000396076 NUP133Q8WUM0 1156 aa27.38■■□□□ 1.97
LDHB-203ENST00000396076 MTMR4Q9NYA4 1195 aa27.38■■□□□ 1.97
LDHB-203ENST00000396076 CPLX1O14810 134 aa27.37■■□□□ 1.97
LDHB-203ENST00000396076 CALM1P0DP23 149 aa27.37■■□□□ 1.97
LDHB-203ENST00000396076 CALM2P0DP24 149 aa27.37■■□□□ 1.97
LDHB-203ENST00000396076 CALM3P0DP25 149 aa27.37■■□□□ 1.97
LDHB-203ENST00000396076 TMEM47Q9BQJ4 181 aa27.37■■□□□ 1.97
LDHB-203ENST00000396076 GGA3Q9NZ52 723 aa27.37■■□□□ 1.97
LDHB-203ENST00000396076 PPP2R5BQ15173 497 aa27.36■■□□□ 1.97
LDHB-203ENST00000396076 RTN1Q16799 776 aa27.36■■□□□ 1.97
LDHB-203ENST00000396076 PTPDC1A2A3K4 754 aa27.36■■□□□ 1.97
LDHB-203ENST00000396076 NUCB2P80303 420 aa27.36■■□□□ 1.97
LDHB-203ENST00000396076 HMGN5P82970 282 aaKnown RBP27.36■■□□□ 1.97
LDHB-203ENST00000396076 MIGA2Q7L4E1 593 aa27.36■■□□□ 1.97
LDHB-203ENST00000396076 PNMA1Q8ND90 353 aa27.36■■□□□ 1.97
LDHB-203ENST00000396076 CCDC196A0A1B0GTZ2 297 aa27.35■■□□□ 1.97
LDHB-203ENST00000396076 TOP1P11387 765 aaKnown RBP27.35■■□□□ 1.97
LDHB-203ENST00000396076 RRP1BQ14684 758 aaKnown RBP27.35■■□□□ 1.97
LDHB-203ENST00000396076 ABCB5Q2M3G0 1257 aa27.35■■□□□ 1.97
LDHB-203ENST00000396076 CPLX2Q6PUV4 134 aaKnown RBP27.35■■□□□ 1.97
LDHB-203ENST00000396076 DDX11Q96FC9 970 aa27.35■■□□□ 1.97
LDHB-203ENST00000396076 PITPNM2Q9BZ72 1349 aa27.35■■□□□ 1.97
LDHB-203ENST00000396076 GDF11O95390 407 aa27.34■■□□□ 1.97
LDHB-203ENST00000396076 NTRK3Q16288 839 aa27.34■■□□□ 1.97
LDHB-203ENST00000396076 PPP4R3BQ5MIZ7 849 aa27.34■■□□□ 1.97
LDHB-203ENST00000396076 TMEM179Q6ZVK1 233 aa27.34■■□□□ 1.97
LDHB-203ENST00000396076 CDKL5O76039 1030 aa27.33■■□□□ 1.97
LDHB-203ENST00000396076 TTLL1O95922 423 aa27.33■■□□□ 1.97
LDHB-203ENST00000396076 PKP1Q13835 747 aa27.33■■□□□ 1.97
LDHB-203ENST00000396076 SHROOM1Q2M3G4 852 aaPredicted RBP27.33■■□□□ 1.97
LDHB-203ENST00000396076 USP50Q70EL3 339 aaPredicted RBP27.33■■□□□ 1.97
LDHB-203ENST00000396076 EPHX2P34913 555 aa27.32■■□□□ 1.96
LDHB-203ENST00000396076 JAG1P78504 1218 aa27.32■■□□□ 1.96
LDHB-203ENST00000396076 RAB3GAP1Q15042 981 aa27.32■■□□□ 1.96
LDHB-203ENST00000396076 MAP3K14Q99558 947 aa27.32■■□□□ 1.96
LDHB-203ENST00000396076 KANSL2Q9H9L4 492 aa27.32■■□□□ 1.96
LDHB-203ENST00000396076 CABP5Q9NP86 173 aa27.32■■□□□ 1.96
LDHB-203ENST00000396076 RBM28Q9NW13 759 aaKnown RBP27.32■■□□□ 1.96
LDHB-203ENST00000396076 CLIP2Q9UDT6 1046 aa27.32■■□□□ 1.96
LDHB-203ENST00000396076 PPP2R3BQ9Y5P8 575 aa27.32■■□□□ 1.96
LDHB-203ENST00000396076 PPFIA3O75145 1194 aa27.31■■□□□ 1.96
LDHB-203ENST00000396076 SYT1P21579 422 aa27.31■■□□□ 1.96
LDHB-203ENST00000396076 GUCY1A2P33402 732 aa27.31■■□□□ 1.96
LDHB-203ENST00000396076 NBPF12Q5TAG4 269 aaPredicted RBP27.31■■□□□ 1.96
LDHB-203ENST00000396076 CLEC10AQ8IUN9 316 aa27.31■■□□□ 1.96
LDHB-203ENST00000396076 GH2P01242 217 aa27.31■■□□□ 1.96
LDHB-203ENST00000396076 FDPSP14324 419 aaKnown RBP27.31■■□□□ 1.96
LDHB-203ENST00000396076 IFNAR1P17181 557 aa27.31■■□□□ 1.96
LDHB-203ENST00000396076 PDCP20941 246 aa27.31■■□□□ 1.96
LDHB-203ENST00000396076 SEPT2Q15019 361 aa27.31■■□□□ 1.96
LDHB-203ENST00000396076 LARP1BQ659C4 914 aaKnown RBP27.31■■□□□ 1.96
LDHB-203ENST00000396076 FAM184AQ8NB25 1140 aa27.31■■□□□ 1.96
LDHB-203ENST00000396076 CTCFLQ8NI51 663 aaPredicted RBP27.31■■□□□ 1.96
LDHB-203ENST00000396076 ZDHHC9Q9Y397 364 aa27.31■■□□□ 1.96
LDHB-203ENST00000396076 MYH8P13535 1937 aa27.3■■□□□ 1.96
LDHB-203ENST00000396076 IQCA1LA6NCM1 817 aa27.3■■□□□ 1.96
LDHB-203ENST00000396076 DCPSQ96C86 337 aaKnown RBP27.3■■□□□ 1.96
LDHB-203ENST00000396076 NYAP2Q9P242 653 aa27.3■■□□□ 1.96
LDHB-203ENST00000396076 KIF3AQ9Y496 699 aa27.3■■□□□ 1.96
LDHB-203ENST00000396076 STX6O43752 255 aa27.29■■□□□ 1.96
LDHB-203ENST00000396076 PDIA4P13667 645 aaKnown RBP27.29■■□□□ 1.96
LDHB-203ENST00000396076 KIF5BP33176 963 aa27.29■■□□□ 1.96
LDHB-203ENST00000396076 HOOK2Q96ED9 719 aa27.29■■□□□ 1.96
LDHB-203ENST00000396076 ORC3Q9UBD5 711 aaPredicted RBP27.29■■□□□ 1.96
LDHB-203ENST00000396076 GREB1LQ9C091 1923 aaPredicted RBP27.28■■□□□ 1.96
LDHB-203ENST00000396076 POTECB2RU33 542 aa27.28■■□□□ 1.96
LDHB-203ENST00000396076 BRD1O95696 1058 aa27.28■■□□□ 1.96
LDHB-203ENST00000396076 CAP2P40123 477 aa27.28■■□□□ 1.96
LDHB-203ENST00000396076 GRM4Q14833 912 aa27.28■■□□□ 1.96
LDHB-203ENST00000396076 PRAMEF18Q5VWM3 479 aa27.28■■□□□ 1.96
LDHB-203ENST00000396076 PHKBQ93100 1093 aa27.28■■□□□ 1.96
LDHB-203ENST00000396076 MKL1Q969V6 931 aa27.28■■□□□ 1.96
LDHB-203ENST00000396076 TAF1DQ9H5J8 278 aaPredicted RBP27.28■■□□□ 1.96
LDHB-203ENST00000396076 PHF20L1A8MW92 1017 aa27.27■■□□□ 1.96
LDHB-203ENST00000396076 EEF2P13639 858 aaKnown RBP27.27■■□□□ 1.96
LDHB-203ENST00000396076 ATP2B2Q01814 1243 aa27.27■■□□□ 1.96
LDHB-203ENST00000396076 SIAH1Q8IUQ4 282 aa27.27■■□□□ 1.96
LDHB-203ENST00000396076 CMTR1Q8N1G2 835 aaKnown RBP27.27■■□□□ 1.96
LDHB-203ENST00000396076 ZC3H15Q8WU90 426 aaKnown RBP27.27■■□□□ 1.96
LDHB-203ENST00000396076 WDR33Q9C0J8 1336 aaKnown RBP27.27■■□□□ 1.96
LDHB-203ENST00000396076 DCAF8L1A6NGE4 600 aa27.26■■□□□ 1.96
LDHB-203ENST00000396076 ICA1Q05084 483 aa27.26■■□□□ 1.96
LDHB-203ENST00000396076 SSRP1Q08945 709 aaKnown RBP27.26■■□□□ 1.96
LDHB-203ENST00000396076 DCAF15Q66K64 600 aa27.26■■□□□ 1.96
LDHB-203ENST00000396076 TMTC3Q6ZXV5 915 aa27.26■■□□□ 1.96
LDHB-203ENST00000396076 NBPF11Q86T75 865 aa27.26■■□□□ 1.96
LDHB-203ENST00000396076 LRRC47Q8N1G4 583 aaKnown RBP27.26■■□□□ 1.96
LDHB-203ENST00000396076 ZBTB21Q9ULJ3 1066 aa27.26■■□□□ 1.96
LDHB-203ENST00000396076 PLEKHA8P1O95397 391 aa27.26■■□□□ 1.95
LDHB-203ENST00000396076 FMNL1O95466 1100 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms