RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 TULP1O00294 542 aaPredicted RBP8.51□□□□□ -1.05
XCR1-202ENST00000395946 STRNO43815 780 aa8.51□□□□□ -1.05
XCR1-202ENST00000395946 SURF6O75683 361 aaKnown RBP8.51□□□□□ -1.05
XCR1-202ENST00000395946 SLURP2P0DP57 97 aa8.51□□□□□ -1.05
XCR1-202ENST00000395946 CACNB2Q08289 660 aaPredicted RBP8.51□□□□□ -1.05
XCR1-202ENST00000395946 GRB14Q14449 540 aa8.51□□□□□ -1.05
XCR1-202ENST00000395946 LHX8Q68G74 356 aa8.51□□□□□ -1.05
XCR1-202ENST00000395946 FAM109BQ6ICB4 259 aaPredicted RBP8.51□□□□□ -1.05
XCR1-202ENST00000395946 MB21D1Q8N884 522 aa8.51□□□□□ -1.05
XCR1-202ENST00000395946 EDC3Q96F86 508 aaKnown RBP8.51□□□□□ -1.05
XCR1-202ENST00000395946 TXNRD2Q9NNW7 524 aa8.51□□□□□ -1.05
XCR1-202ENST00000395946 CABP5Q9NP86 173 aa8.51□□□□□ -1.05
XCR1-202ENST00000395946 EMILIN3Q9NT22 766 aa8.51□□□□□ -1.05
XCR1-202ENST00000395946 DBNLQ9UJU6 430 aaKnown RBP8.51□□□□□ -1.05
XCR1-202ENST00000395946 PALD1Q9ULE6 856 aa8.51□□□□□ -1.05
XCR1-202ENST00000395946 SZT2Q5T011 3432 aa8.51□□□□□ -1.05
XCR1-202ENST00000395946 DDX60LQ5H9U9 1706 aaKnown RBP8.51□□□□□ -1.05
XCR1-202ENST00000395946 ZNF236Q9UL36 1845 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 DNM1LO00429 736 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 SOX1O00570 391 aaPredicted RBP8.5□□□□□ -1.05
XCR1-202ENST00000395946 GDF11O95390 407 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 GH2P01242 217 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 VCAM1P19320 739 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 CYP7A1P22680 504 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 PTPREP23469 700 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 MAGEA10P43363 369 aaPredicted RBP8.5□□□□□ -1.05
XCR1-202ENST00000395946 ZAP70P43403 619 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 USP5P45974 858 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 CERKLQ49MI3 558 aaPredicted RBP8.5□□□□□ -1.05
XCR1-202ENST00000395946 OLFML2BQ68BL8 750 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 CATSPERGQ6ZRH7 1159 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 ADGRA1Q86SQ6 560 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 FTSJ3Q8IY81 847 aaKnown RBP8.5□□□□□ -1.05
XCR1-202ENST00000395946 ABRAQ8N0Z2 381 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 TMEM57Q8N5G2 664 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 SHCBP1Q8NEM2 672 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.5□□□□□ -1.05
XCR1-202ENST00000395946 LPAR1Q92633 364 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 FRAT1Q92837 279 aaPredicted RBP8.5□□□□□ -1.05
XCR1-202ENST00000395946 UBE2OQ9C0C9 1292 aaKnown RBP8.5□□□□□ -1.05
XCR1-202ENST00000395946 PORCNQ9H237 461 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 SH2D4AQ9H788 454 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 SLC5A4Q9NY91 659 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 DDX20Q9UHI6 824 aaKnown RBP8.5□□□□□ -1.05
XCR1-202ENST00000395946 LAMA3Q16787 3333 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 PLXNB2O15031 1838 aa8.5□□□□□ -1.05
XCR1-202ENST00000395946 IDH1O75874 414 aaKnown RBP8.49□□□□□ -1.05
XCR1-202ENST00000395946 TRIM32Q13049 653 aa8.49□□□□□ -1.05
XCR1-202ENST00000395946 ABCB5Q2M3G0 1257 aa8.49□□□□□ -1.05
XCR1-202ENST00000395946 DEFB123Q8N688 67 aa8.49□□□□□ -1.05
XCR1-202ENST00000395946 LRCH3Q96II8 777 aa8.49□□□□□ -1.05
XCR1-202ENST00000395946 PAGR1Q9BTK6 254 aa8.49□□□□□ -1.05
XCR1-202ENST00000395946 SNRKQ9NRH2 765 aa8.49□□□□□ -1.05
XCR1-202ENST00000395946 HOXC10Q9NYD6 342 aa8.49□□□□□ -1.05
XCR1-202ENST00000395946 PRKAG2Q9UGJ0 569 aa8.49□□□□□ -1.05
XCR1-202ENST00000395946 SWAP70Q9UH65 585 aa8.49□□□□□ -1.05
XCR1-202ENST00000395946 NRBP1Q9UHY1 535 aa8.49□□□□□ -1.05
XCR1-202ENST00000395946 ZMYND8Q9ULU4 1186 aaPredicted RBP8.49□□□□□ -1.05
XCR1-202ENST00000395946 ROBO3Q96MS0 1386 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 ALPK3Q96L96 1907 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 SPDYE16A6NNV3 312 aaPredicted RBP8.48□□□□□ -1.05
XCR1-202ENST00000395946 DLL1O00548 723 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 BCAR3O75815 825 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 IGHA2P01877 340 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 MS4A1P11836 297 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 COPB2P35606 906 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 JAG1P78504 1218 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 ATP2B2Q01814 1243 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 GABPAQ06546 454 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 COG2Q14746 738 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 Q3C1V9 767 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 C1orf53Q5VUE5 145 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 TMEM179Q6ZVK1 233 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 MAGEB6Q8N7X4 407 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 ARRDC4Q8NCT1 418 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 CLUAP1Q96AJ1 413 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 LBHD1Q9BQE6 289 aaPredicted RBP8.48□□□□□ -1.05
XCR1-202ENST00000395946 RIOK1Q9BRS2 568 aaKnown RBP8.48□□□□□ -1.05
XCR1-202ENST00000395946 CRNKL1Q9BZJ0 848 aaKnown RBP8.48□□□□□ -1.05
XCR1-202ENST00000395946 MROH8Q9H579 483 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 PIH1D3Q9NQM4 214 aaKnown RBP8.48□□□□□ -1.05
XCR1-202ENST00000395946 MTMR10Q9NXD2 777 aa8.48□□□□□ -1.05
XCR1-202ENST00000395946 CNMDO75829 334 aa8.47□□□□□ -1.05
XCR1-202ENST00000395946 CYBAP13498 195 aa8.47□□□□□ -1.05
XCR1-202ENST00000395946 CCND3P30281 292 aaPredicted RBP8.47□□□□□ -1.05
XCR1-202ENST00000395946 SHMT1P34896 483 aa8.47□□□□□ -1.05
XCR1-202ENST00000395946 SNX17Q15036 470 aa8.47□□□□□ -1.05
XCR1-202ENST00000395946 RAB3GAP1Q15042 981 aa8.47□□□□□ -1.05
XCR1-202ENST00000395946 CCL14Q16627 93 aa8.47□□□□□ -1.05
XCR1-202ENST00000395946 LRRC26Q2I0M4 334 aa8.47□□□□□ -1.05
XCR1-202ENST00000395946 EAF2Q96CJ1 260 aaPredicted RBP8.47□□□□□ -1.05
XCR1-202ENST00000395946 CCDC17Q96LX7 622 aa8.47□□□□□ -1.05
XCR1-202ENST00000395946 CHMP4BQ9H444 224 aaKnown RBP8.47□□□□□ -1.05
XCR1-202ENST00000395946 RPAP3Q9H6T3 665 aaPredicted RBP8.47□□□□□ -1.05
XCR1-202ENST00000395946 SAP30BPQ9UHR5 308 aaKnown RBP8.47□□□□□ -1.05
XCR1-202ENST00000395946 CDK5RAP2Q96SN8 1893 aa8.47□□□□□ -1.05
XCR1-202ENST00000395946 A0A0G2JMZ2 1700 aa8.46□□□□□ -1.05
XCR1-202ENST00000395946 DOCK3Q8IZD9 2030 aa8.46□□□□□ -1.05
XCR1-202ENST00000395946 TMEM265A0A087WTH1 108 aa8.46□□□□□ -1.06
XCR1-202ENST00000395946 MAGEB6P1A0A0J9YX57 407 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms