RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 RIOX1Q9H6W3 641 aa16.44■□□□□ 0.22
CDC42SE2-202ENST00000395246 FAM160A1Q05DH4 1040 aa16.44■□□□□ 0.22
CDC42SE2-202ENST00000395246 SRBD1Q8N5C6 995 aaKnown RBP16.44■□□□□ 0.22
CDC42SE2-202ENST00000395246 NCLP19338 710 aaKnown RBP16.44■□□□□ 0.22
CDC42SE2-202ENST00000395246 CCDC173Q0VFZ6 552 aa16.44■□□□□ 0.22
CDC42SE2-202ENST00000395246 RILPL1Q5EBL4 403 aa16.44■□□□□ 0.22
CDC42SE2-202ENST00000395246 DDX11Q96FC9 970 aa16.44■□□□□ 0.22
CDC42SE2-202ENST00000395246 GPR101Q96P66 508 aaPredicted RBP16.44■□□□□ 0.22
CDC42SE2-202ENST00000395246 GUCY1A2P33402 732 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 CDC42EP5Q6NZY7 148 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 MCM9Q9NXL9 1143 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 PCDHA7Q9UN72 937 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 CPLX1O14810 134 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 LIG1P18858 919 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 CHAF1AQ13111 956 aaPredicted RBP16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 GOLPH3LQ9H4A5 285 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 A0A0G2JMZ2 1700 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 WDR90Q96KV7 1748 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 USP17L3A6NCW0 530 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 USP17L4A6NCW7 530 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 TBC1D12O60347 775 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 USP17L1Q7RTZ2 530 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 TSPY26PQ9H489 355 aa16.43■□□□□ 0.22
CDC42SE2-202ENST00000395246 YDJCA8MPS7 323 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 ECE2O60344 883 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 SHMT1P34896 483 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 TRIM22Q8IYM9 498 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 SPATA20Q8TB22 786 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 GDPD2Q9HCC8 539 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 DDX4Q9NQI0 724 aaKnown RBP16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 KIF5BP33176 963 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 SEMA3FQ13275 785 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 PPP1R18Q6NYC8 613 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 TEX11Q8IYF3 940 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 MICU3Q86XE3 530 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 TGFBRAP1Q8WUH2 860 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 TEKT1Q969V4 418 aa16.42■□□□□ 0.22
CDC42SE2-202ENST00000395246 MINDY4BA8MYZ0 360 aa16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 CUTAO60888 179 aa16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 BMP15O95972 392 aa16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 AMOTL1Q8IY63 956 aa16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 TUBE1Q9UJT0 475 aa16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 FIBPO43427 364 aa16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 TOP1P11387 765 aaKnown RBP16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 PTPREP23469 700 aa16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 CRKP46108 304 aa16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 GTF2IP78347 998 aa16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 CCDC17Q96LX7 622 aa16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 CLIC4Q9Y696 253 aa16.41■□□□□ 0.22
CDC42SE2-202ENST00000395246 MDM2Q00987 491 aaPredicted RBP16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 CCDC93Q567U6 631 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 FAM198AQ9UFP1 575 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 FBXO2Q9UK22 296 aaPredicted RBP16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 SYCE3A1L190 88 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 C4orf32Q8N8J7 132 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 PHKBQ93100 1093 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 NPHP1O15259 732 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 USP5P45974 858 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 TFAP4Q01664 338 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 FAM173BQ6P4H8 233 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 STK11IPQ8N1F8 1099 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 AGBL3Q8NEM8 1001 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 TMEM47Q9BQJ4 181 aa16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 SRPRBQ9Y5M8 271 aaKnown RBP16.4■□□□□ 0.22
CDC42SE2-202ENST00000395246 NR1I2O75469 434 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 CT47A1Q5JQC4 288 aaPredicted RBP16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 DNAJC18Q9H819 358 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 SPTLC2O15270 562 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 SCG2P13521 617 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 NFXL1Q6ZNB6 911 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 FERMT3Q86UX7 667 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 ZMYND12Q9H0C1 365 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 MRVI1Q9Y6F6 885 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 RLFQ13129 1914 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 CNTNAP1P78357 1384 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 C6orf229H3BNL8 230 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 PLEKHA8P1O95397 391 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 TTLL6Q8N841 843 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 GMCL1P1Q8NEA9 526 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 MRPS27Q92552 414 aaKnown RBP16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 CD2APQ9Y5K6 639 aa16.39■□□□□ 0.21
CDC42SE2-202ENST00000395246 CYTH3O43739 400 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 SARM1Q6SZW1 724 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 SH3BP5LQ7L8J4 393 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 AIFM3Q96NN9 605 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 NYAP2Q9P242 653 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 PLA2G6O60733 806 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 ZNF280AP59817 542 aaPredicted RBP16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 SLC26A6Q9BXS9 759 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 USP25Q9UHP3 1055 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 FOXP4Q8IVH2 680 aaPredicted RBP16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 MYL10Q9BUA6 226 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 MTFR1LQ9H019 292 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 NUP62CLQ9H1M0 184 aa16.38■□□□□ 0.21
CDC42SE2-202ENST00000395246 CLK2P49760 499 aaKnown RBP16.37■□□□□ 0.21
CDC42SE2-202ENST00000395246 MAP3K11Q16584 847 aa16.37■□□□□ 0.21
CDC42SE2-202ENST00000395246 ASPRV1Q53RT3 343 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms