RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 RCSD1Q6JBY9 416 aa11.53□□□□□ -0.56
BBS4-202ENST00000395205 SMARCC2Q8TAQ2 1214 aa11.53□□□□□ -0.56
BBS4-202ENST00000395205 TRPM4Q8TD43 1214 aa11.53□□□□□ -0.56
BBS4-202ENST00000395205 ANKS1AQ92625 1134 aa11.53□□□□□ -0.56
BBS4-202ENST00000395205 CEP95Q96GE4 821 aa11.53□□□□□ -0.56
BBS4-202ENST00000395205 DNAJC18Q9H819 358 aa11.53□□□□□ -0.56
BBS4-202ENST00000395205 TAOK2Q9UL54 1235 aa11.53□□□□□ -0.56
BBS4-202ENST00000395205 NAV1Q8NEY1 1877 aa11.53□□□□□ -0.56
BBS4-202ENST00000395205 PSME4Q14997 1843 aa11.52□□□□□ -0.56
BBS4-202ENST00000395205 PDCP20941 246 aa11.52□□□□□ -0.56
BBS4-202ENST00000395205 HERC5Q9UII4 1024 aaKnown RBP11.52□□□□□ -0.56
BBS4-202ENST00000395205 MTMR7Q9Y216 660 aa11.52□□□□□ -0.56
BBS4-202ENST00000395205 KIF3AQ9Y496 699 aa11.52□□□□□ -0.56
BBS4-202ENST00000395205 STX6O43752 255 aa11.52□□□□□ -0.57
BBS4-202ENST00000395205 DDAH1O94760 285 aa11.52□□□□□ -0.57
BBS4-202ENST00000395205 RCAN1P53805 252 aa11.52□□□□□ -0.57
BBS4-202ENST00000395205 ANGEL2Q5VTE6 544 aaKnown RBP11.52□□□□□ -0.57
BBS4-202ENST00000395205 TATDN1Q6P1N9 297 aa11.52□□□□□ -0.57
BBS4-202ENST00000395205 MIGA2Q7L4E1 593 aa11.52□□□□□ -0.57
BBS4-202ENST00000395205 METTL16Q86W50 562 aaKnown RBP11.52□□□□□ -0.57
BBS4-202ENST00000395205 PNMA1Q8ND90 353 aa11.52□□□□□ -0.57
BBS4-202ENST00000395205 TMEM47Q9BQJ4 181 aa11.52□□□□□ -0.57
BBS4-202ENST00000395205 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.52□□□□□ -0.57
BBS4-202ENST00000395205 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
BBS4-202ENST00000395205 WDR33Q9C0J8 1336 aaKnown RBP11.52□□□□□ -0.57
BBS4-202ENST00000395205 ATP2B2Q01814 1243 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 TROAPQ12815 778 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 PPP2R5BQ15173 497 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 CCDC82Q8N4S0 544 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 CTCFLQ8NI51 663 aaPredicted RBP11.51□□□□□ -0.57
BBS4-202ENST00000395205 TNPO1Q92973 898 aaKnown RBP11.51□□□□□ -0.57
BBS4-202ENST00000395205 DEFB129Q9H1M3 183 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 MTMR4Q9NYA4 1195 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 ORC3Q9UBD5 711 aaPredicted RBP11.51□□□□□ -0.57
BBS4-202ENST00000395205 CLIP2Q9UDT6 1046 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 VPS37CA5D8V6 355 aaPredicted RBP11.51□□□□□ -0.57
BBS4-202ENST00000395205 GDF11O95390 407 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 TOP1P11387 765 aaKnown RBP11.51□□□□□ -0.57
BBS4-202ENST00000395205 ABCB5Q2M3G0 1257 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 CDAN1Q8IWY9 1227 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 PHKBQ93100 1093 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 CABP5Q9NP86 173 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 ADARB2Q9NS39 739 aaKnown RBP11.51□□□□□ -0.57
BBS4-202ENST00000395205 RBM28Q9NW13 759 aaKnown RBP11.51□□□□□ -0.57
BBS4-202ENST00000395205 ZDHHC9Q9Y397 364 aa11.51□□□□□ -0.57
BBS4-202ENST00000395205 COL2A1P02458 1487 aaPredicted RBP11.51□□□□□ -0.57
BBS4-202ENST00000395205 H3BQV1 296 aa11.5□□□□□ -0.57
BBS4-202ENST00000395205 BRD1O95696 1058 aa11.5□□□□□ -0.57
BBS4-202ENST00000395205 TTLL1O95922 423 aa11.5□□□□□ -0.57
BBS4-202ENST00000395205 PDIA4P13667 645 aaKnown RBP11.5□□□□□ -0.57
BBS4-202ENST00000395205 FOSBP53539 338 aa11.5□□□□□ -0.57
BBS4-202ENST00000395205 HIRAP54198 1017 aaPredicted RBP11.5□□□□□ -0.57
BBS4-202ENST00000395205 SSRP1Q08945 709 aaKnown RBP11.5□□□□□ -0.57
BBS4-202ENST00000395205 IFFO2Q5TF58 517 aa11.5□□□□□ -0.57
BBS4-202ENST00000395205 CMTR1Q8N1G2 835 aaKnown RBP11.5□□□□□ -0.57
BBS4-202ENST00000395205 LAMB1P07942 1786 aa11.5□□□□□ -0.57
BBS4-202ENST00000395205 IGKV6D-41A0A0C4DH26 115 aa11.5□□□□□ -0.57
BBS4-202ENST00000395205 FDPSP14324 419 aaKnown RBP11.5□□□□□ -0.57
BBS4-202ENST00000395205 KIF5BP33176 963 aa11.5□□□□□ -0.57
BBS4-202ENST00000395205 PPP4R3BQ5MIZ7 849 aa11.5□□□□□ -0.57
BBS4-202ENST00000395205 APOBEC3FQ8IUX4 373 aaKnown RBP11.5□□□□□ -0.57
BBS4-202ENST00000395205 SLC26A6Q9BXS9 759 aa11.5□□□□□ -0.57
BBS4-202ENST00000395205 DDX60LQ5H9U9 1706 aaKnown RBP11.5□□□□□ -0.57
BBS4-202ENST00000395205 TBC1D12O60347 775 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 ZSCAN22P10073 491 aaPredicted RBP11.49□□□□□ -0.57
BBS4-202ENST00000395205 IFNAR1P17181 557 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 NTRK3Q16288 839 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 TMEM179Q6ZVK1 233 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 CLEC10AQ8IUN9 316 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 TRIM22Q8IYM9 498 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 KANSL2Q9H9L4 492 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 GGA3Q9NZ52 723 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 PGAP2Q9UHJ9 254 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 MYH1P12882 1939 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 GH2P01242 217 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 AKAP17AQ02040 695 aaKnown RBP11.49□□□□□ -0.57
BBS4-202ENST00000395205 SEPT2Q15019 361 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 SHROOM1Q2M3G4 852 aaPredicted RBP11.49□□□□□ -0.57
BBS4-202ENST00000395205 MTMR6Q9Y217 621 aa11.49□□□□□ -0.57
BBS4-202ENST00000395205 NID2Q14112 1375 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 PLIN4Q96Q06 1357 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 CDK5RAP2Q96SN8 1893 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 GLTPD2A6NH11 291 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 FMNL1O95466 1100 aaPredicted RBP11.48□□□□□ -0.57
BBS4-202ENST00000395205 NOVP48745 357 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 RRP1BQ14684 758 aaKnown RBP11.48□□□□□ -0.57
BBS4-202ENST00000395205 LRRC47Q8N1G4 583 aaKnown RBP11.48□□□□□ -0.57
BBS4-202ENST00000395205 TEPSINQ96N21 525 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 MAP3K14Q99558 947 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 PLEKHA8P1O95397 391 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 EEF2P13639 858 aaKnown RBP11.48□□□□□ -0.57
BBS4-202ENST00000395205 NBPF12Q5TAG4 269 aaPredicted RBP11.48□□□□□ -0.57
BBS4-202ENST00000395205 PRAMEF18Q5VWM3 479 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 DCPSQ96C86 337 aaKnown RBP11.48□□□□□ -0.57
BBS4-202ENST00000395205 C8orf76Q96K31 380 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 GBP4Q96PP9 640 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 ALG1Q9BT22 464 aa11.48□□□□□ -0.57
BBS4-202ENST00000395205 FOCADQ5VW36 1801 aa11.47□□□□□ -0.57
BBS4-202ENST00000395205 RAD21O60216 631 aa11.47□□□□□ -0.57
BBS4-202ENST00000395205 GNAQP50148 359 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms