RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 ZNF438Q7Z4V0 828 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 GALNT12Q8IXK2 581 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 SHDQ96IW2 340 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 TRIM56Q9BRZ2 755 aaKnown RBP11.06□□□□□ -0.64
PFDN6-205ENST00000395134 TCEAL9Q9UHQ7 104 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 FNDC3AQ9Y2H6 1198 aaKnown RBP11.06□□□□□ -0.64
PFDN6-205ENST00000395134 WDR90Q96KV7 1748 aa11.06□□□□□ -0.64
PFDN6-205ENST00000395134 GREM1O60565 184 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 HSPA6P17066 643 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 GRM5P41594 1212 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 RASSF7Q02833 373 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 RASGRF1Q13972 1273 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 GRM2Q14416 872 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 NFIXQ14938 502 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 PDE12Q6L8Q7 609 aaKnown RBP11.05□□□□□ -0.64
PFDN6-205ENST00000395134 TTC5Q8N0Z6 440 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 WNT2BQ93097 391 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 CDK15Q96Q40 435 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 PPP4R2Q9NY27 417 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 LEMD3Q9Y2U8 911 aa11.05□□□□□ -0.64
PFDN6-205ENST00000395134 SUPT16HQ9Y5B9 1047 aaKnown RBP11.05□□□□□ -0.64
PFDN6-205ENST00000395134 POLR3DP05423 398 aaPredicted RBP11.04□□□□□ -0.64
PFDN6-205ENST00000395134 TEFQ10587 303 aa11.04□□□□□ -0.64
PFDN6-205ENST00000395134 DDR2Q16832 855 aa11.04□□□□□ -0.64
PFDN6-205ENST00000395134 TKFCQ3LXA3 575 aa11.04□□□□□ -0.64
PFDN6-205ENST00000395134 RPS6KC1Q96S38 1066 aa11.04□□□□□ -0.64
PFDN6-205ENST00000395134 RNF181Q9P0P0 153 aa11.04□□□□□ -0.64
PFDN6-205ENST00000395134 NARFQ9UHQ1 456 aa11.04□□□□□ -0.64
PFDN6-205ENST00000395134 SLX4Q8IY92 1834 aa11.04□□□□□ -0.64
PFDN6-205ENST00000395134 FER1L6Q2WGJ9 1857 aa11.04□□□□□ -0.64
PFDN6-205ENST00000395134 GARTP22102 1010 aa11.03□□□□□ -0.64
PFDN6-205ENST00000395134 TM4SF1P30408 202 aa11.03□□□□□ -0.64
PFDN6-205ENST00000395134 PRKAR2BP31323 418 aa11.03□□□□□ -0.64
PFDN6-205ENST00000395134 PIP4K2AP48426 406 aaPredicted RBP11.03□□□□□ -0.64
PFDN6-205ENST00000395134 EXOSC10Q01780 885 aaKnown RBP11.03□□□□□ -0.64
PFDN6-205ENST00000395134 PPP1R26Q5T8A7 1209 aaPredicted RBP11.03□□□□□ -0.64
PFDN6-205ENST00000395134 APBB1IPQ7Z5R6 666 aaPredicted RBP11.03□□□□□ -0.64
PFDN6-205ENST00000395134 C3orf58Q8NDZ4 430 aa11.03□□□□□ -0.64
PFDN6-205ENST00000395134 IL17REQ8NFR9 667 aa11.03□□□□□ -0.64
PFDN6-205ENST00000395134 RELTQ969Z4 430 aa11.03□□□□□ -0.64
PFDN6-205ENST00000395134 ZNF496Q96IT1 587 aaPredicted RBP11.03□□□□□ -0.64
PFDN6-205ENST00000395134 RHOVQ96L33 236 aa11.03□□□□□ -0.64
PFDN6-205ENST00000395134 UBP1Q9NZI7 540 aa11.03□□□□□ -0.64
PFDN6-205ENST00000395134 GNAT3A8MTJ3 354 aa11.02□□□□□ -0.65
PFDN6-205ENST00000395134 KCNQ3O43525 872 aa11.02□□□□□ -0.65
PFDN6-205ENST00000395134 HIF1AQ16665 826 aa11.02□□□□□ -0.65
PFDN6-205ENST00000395134 C2orf27AQ580R0 203 aa11.02□□□□□ -0.65
PFDN6-205ENST00000395134 PHACTR3Q96KR7 559 aa11.02□□□□□ -0.65
PFDN6-205ENST00000395134 UBA5Q9GZZ9 404 aa11.02□□□□□ -0.65
PFDN6-205ENST00000395134 ST7Q9NRC1 585 aa11.02□□□□□ -0.65
PFDN6-205ENST00000395134 LAMB4A4D0S4 1761 aa11.02□□□□□ -0.65
PFDN6-205ENST00000395134 NPC1L1Q9UHC9 1359 aa11.02□□□□□ -0.65
PFDN6-205ENST00000395134 HEG1Q9ULI3 1381 aa11.02□□□□□ -0.65
PFDN6-205ENST00000395134 ARFGEF2Q9Y6D5 1785 aa11.01□□□□□ -0.65
PFDN6-205ENST00000395134 TGFBR3LH3BV60 316 aa11.01□□□□□ -0.65
PFDN6-205ENST00000395134 STARD3NLO95772 234 aa11.01□□□□□ -0.65
PFDN6-205ENST00000395134 SERPINB2P05120 415 aa11.01□□□□□ -0.65
PFDN6-205ENST00000395134 CENPCQ03188 943 aa11.01□□□□□ -0.65
PFDN6-205ENST00000395134 TCEA2Q15560 299 aa11.01□□□□□ -0.65
PFDN6-205ENST00000395134 C2CD5Q86YS7 1000 aa11.01□□□□□ -0.65
PFDN6-205ENST00000395134 CCDC116Q8IYX3 515 aa11.01□□□□□ -0.65
PFDN6-205ENST00000395134 THAP3Q8WTV1 239 aaPredicted RBP11.01□□□□□ -0.65
PFDN6-205ENST00000395134 NKD1Q969G9 470 aa11.01□□□□□ -0.65
PFDN6-205ENST00000395134 ELP3Q9H9T3 547 aa11.01□□□□□ -0.65
PFDN6-205ENST00000395134 NUP98P52948 1817 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 POTEB3A0JP26 581 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 S1PR4O95977 384 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 A1BGP04217 495 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 HTRA3P83110 453 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 FAM160A1Q05DH4 1040 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 APOBRQ0VD83 1088 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 TBC1D9BQ66K14 1250 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 ZNF790Q6PG37 636 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 POTEBQ6S5H4 581 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 SLITRK4Q8IW52 837 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 JMYQ8N9B5 988 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 GLIS3Q8NEA6 775 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 CFAP53Q96M91 514 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 MTRQ99707 1265 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 NIFKQ9BYG3 293 aaKnown RBP11□□□□□ -0.65
PFDN6-205ENST00000395134 ATP8A1Q9Y2Q0 1164 aa11□□□□□ -0.65
PFDN6-205ENST00000395134 PRAMEF22A3QJZ6 481 aa10.99□□□□□ -0.65
PFDN6-205ENST00000395134 U2AF1L5P0DN76 240 aaPredicted RBP10.99□□□□□ -0.65
PFDN6-205ENST00000395134 EIF5P55010 431 aaKnown RBP10.99□□□□□ -0.65
PFDN6-205ENST00000395134 SKOR1P84550 965 aa10.99□□□□□ -0.65
PFDN6-205ENST00000395134 U2AF1Q01081 240 aaKnown RBP eCLIP10.99□□□□□ -0.65
PFDN6-205ENST00000395134 CLN3Q13286 438 aa10.99□□□□□ -0.65
PFDN6-205ENST00000395134 DCTN1Q14203 1278 aa10.99□□□□□ -0.65
PFDN6-205ENST00000395134 RALBP1Q15311 655 aa10.99□□□□□ -0.65
PFDN6-205ENST00000395134 BRDTQ58F21 947 aaPredicted RBP10.99□□□□□ -0.65
PFDN6-205ENST00000395134 CCSAPQ6IQ19 270 aaPredicted RBP10.99□□□□□ -0.65
PFDN6-205ENST00000395134 PRPF40BQ6NWY9 871 aaKnown RBP10.99□□□□□ -0.65
PFDN6-205ENST00000395134 CCDC81Q6ZN84 652 aa10.99□□□□□ -0.65
PFDN6-205ENST00000395134 TSHZ1Q6ZSZ6 1077 aa10.99□□□□□ -0.65
PFDN6-205ENST00000395134 SV2BQ7L1I2 683 aa10.99□□□□□ -0.65
PFDN6-205ENST00000395134 MCM10Q7L590 875 aa10.99□□□□□ -0.65
PFDN6-205ENST00000395134 JAMLQ86YT9 394 aa10.99□□□□□ -0.65
PFDN6-205ENST00000395134 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
PFDN6-205ENST00000395134 FAM169BQ8N8A8 192 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms