RNA–Protein interactions for RNA: ENST00000394672.7

CCDC66-203, Transcript of coiled-coil domain containing 66, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC66, Length 3,096 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-203ENST00000394672 SMC1BQ8NDV3 1235 aa9.13□□□□□ -0.95
CCDC66-203ENST00000394672 NKX2-3Q8TAU0 364 aa9.13□□□□□ -0.95
CCDC66-203ENST00000394672 AS3MTQ9HBK9 375 aa9.13□□□□□ -0.95
CCDC66-203ENST00000394672 TNKSO95271 1327 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 TSPY3P0CV98 308 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 TSPY8P0CW00 308 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 MAP3K9P80192 1104 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 TFAP4Q01664 338 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 EVX2Q03828 476 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 NBPF12Q5TAG4 269 aaPredicted RBP9.12□□□□□ -0.95
CCDC66-203ENST00000394672 BTNL9Q6UXG8 535 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 Q6ZUG5 572 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 USP48Q86UV5 1035 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 CRACR2BQ8N4Y2 399 aaPredicted RBP9.12□□□□□ -0.95
CCDC66-203ENST00000394672 TRIM34Q9BYJ4 488 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 KIAA1683Q9H0B3 1180 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 ZCCHC17Q9NP64 241 aaKnown RBP9.12□□□□□ -0.95
CCDC66-203ENST00000394672 TMX2Q9Y320 296 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 MYPNQ86TC9 1320 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 K7ELQ4 463 aaPredicted RBP9.12□□□□□ -0.95
CCDC66-203ENST00000394672 PPATQ06203 517 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 TCP10Q12799 353 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 WTAPQ15007 396 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 SIAH1Q8IUQ4 282 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 CABP5Q9NP86 173 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 SNCAIPQ9Y6H5 919 aa9.12□□□□□ -0.95
CCDC66-203ENST00000394672 ERICH2A1L162 156 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 TESPA1A2RU30 521 aaPredicted RBP9.11□□□□□ -0.95
CCDC66-203ENST00000394672 C19orf81C9J6K1 198 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 PPIL2Q13356 520 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC66-203ENST00000394672 ARMC9Q7Z3E5 817 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 SMARCC2Q8TAQ2 1214 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 LPAR1Q92633 364 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 GTF3C6Q969F1 213 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 UBAC1Q9BSL1 405 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 HPS5Q9UPZ3 1129 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 SPDYE5A6NIY4 337 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 TSPY2A6NKD2 308 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 ADM5C9JUS6 153 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 DDIT3P35638 169 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 USP14P54578 494 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 TROAPQ12815 778 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 ASPRV1Q53RT3 343 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 TMEM67Q5HYA8 995 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 APOA5Q6Q788 366 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 ANKRD13AQ8IZ07 590 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 MTMR8Q96EF0 704 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 USP17L5A8MUK1 530 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 hCG_1984214I3L0E3 225 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 SMIM22K7EJ46 135 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 CXCL11O14625 94 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 GNAQP50148 359 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 NEK4P51957 841 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 BECN1Q14457 450 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 ZNF713Q8N859 430 aaPredicted RBP9.11□□□□□ -0.95
CCDC66-203ENST00000394672 SLC44A5Q8NCS7 719 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 CEP95Q96GE4 821 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 ARHGEF10LQ9HCE6 1279 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 NMRK2Q9NPI5 230 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 RBM27Q9P2N5 1060 aaKnown RBP9.11□□□□□ -0.95
CCDC66-203ENST00000394672 PNMA2Q9UL42 364 aa9.11□□□□□ -0.95
CCDC66-203ENST00000394672 PALM3A6NDB9 673 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 PPP1R12BO60237 982 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 TOMM70O94826 608 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 PTPRAP18433 802 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 PDIA3P30101 505 aaKnown RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 LBX2Q6XYB7 198 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 SPZ1Q9BXG8 430 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 RBM19Q9Y4C8 960 aaKnown RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 AFG3L2Q9Y4W6 797 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 CCDC196A0A1B0GTZ2 297 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 IFIT3O14879 490 aaKnown RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 ZBTB48P10074 688 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 FDX1P10109 184 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 JAG1P78504 1218 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 GPATCH4Q5T3I0 446 aaKnown RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 IFIT1BQ5T764 474 aaKnown RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 ZSCAN29Q8IWY8 852 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 CDAN1Q8IWY9 1227 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 REM2Q8IYK8 340 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 PROCA1Q8NCQ7 364 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-203ENST00000394672 TMEM47Q9BQJ4 181 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 BRPF3Q9ULD4 1205 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 TPCN1Q9ULQ1 816 aa9.1□□□□□ -0.95
CCDC66-203ENST00000394672 IRF6O14896 467 aa9.09□□□□□ -0.95
CCDC66-203ENST00000394672 RANBP6O60518 1105 aaKnown RBP9.09□□□□□ -0.95
CCDC66-203ENST00000394672 FUT2Q10981 343 aa9.09□□□□□ -0.95
CCDC66-203ENST00000394672 ST3GAL1Q11201 340 aa9.09□□□□□ -0.95
CCDC66-203ENST00000394672 COL9A3Q14050 684 aaPredicted RBP9.09□□□□□ -0.95
CCDC66-203ENST00000394672 USP17L2Q6R6M4 530 aa9.09□□□□□ -0.95
CCDC66-203ENST00000394672 CATIPQ7Z7H3 387 aa9.09□□□□□ -0.95
CCDC66-203ENST00000394672 ZNF654Q8IZM8 581 aa9.09□□□□□ -0.95
CCDC66-203ENST00000394672 GOPCQ9HD26 462 aa9.09□□□□□ -0.95
CCDC66-203ENST00000394672 TLL2Q9Y6L7 1015 aa9.09□□□□□ -0.95
CCDC66-203ENST00000394672 COL11A1P12107 1806 aaPredicted RBP9.09□□□□□ -0.95
CCDC66-203ENST00000394672 A0A0G2JLL6 359 aaPredicted RBP9.09□□□□□ -0.95
CCDC66-203ENST00000394672 DHX16O60231 1041 aaKnown RBP9.09□□□□□ -0.95
CCDC66-203ENST00000394672 ICA1Q05084 483 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms