RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 MORC3Q14149 939 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 SRLQ86TD4 932 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 MAP3K14Q99558 947 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 RNF40O75150 1001 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 TUBBP07437 444 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 SLC5A1P13866 664 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 IFNAR1P17181 557 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 TCIRG1Q13488 830 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 NR1I3Q14994 352 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 SPA17Q15506 151 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 ZNF654Q8IZM8 581 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 TMTC2Q8N394 836 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 IPO4Q8TEX9 1081 aaKnown RBP13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 LY9Q9HBG7 655 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 GNL3LQ9NVN8 582 aaKnown RBP13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 SHTN1A0MZ66 631 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 PRKAB2O43741 272 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 SETQ01105 290 aaPredicted RBP13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 PAK1Q13153 545 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 GPATCH11Q8N954 259 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 KIFC2Q96AC6 838 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 GREM2Q9H772 168 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 TMOD3Q9NYL9 352 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 FBXO2Q9UK22 296 aaPredicted RBP13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 SRPRBQ9Y5M8 271 aaKnown RBP13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 TUBGCP6Q96RT7 1819 aa13.31□□□□□ -0.28
R3HDM2-203ENST00000393811 FXR1P51114 621 aaKnown RBP eCLIP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 SLC4A8Q2Y0W8 1093 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 IQCEQ6IPM2 695 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 IQCA1Q86XH1 822 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 TMEM139Q8IV31 216 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 FANCBQ8NB91 859 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 NOC3LQ8WTT2 800 aaKnown RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 NELFBQ8WX92 580 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 EPN1Q9Y6I3 576 aaPredicted RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 PIK3C2AO00443 1686 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 PATL2C9JE40 543 aaKnown RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 IRS4O14654 1257 aaPredicted RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 KRT86O43790 486 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 STAT6P42226 847 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 BEND6Q5SZJ8 279 aaPredicted RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 IFIT1BQ5T764 474 aaKnown RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 CTCFLQ8NI51 663 aaPredicted RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 TEX13AQ9BXU3 409 aaPredicted RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 FOXP1Q9H334 677 aaPredicted RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 CENPHQ9H3R5 247 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 MKRN1Q9UHC7 482 aaKnown RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 CPDO75976 1380 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 STARD3NLO95772 234 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 CYP7A1P22680 504 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 MTIF2P46199 727 aaKnown RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 CASP7P55210 303 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 IRX3P78415 501 aaPredicted RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 CKAP4Q07065 602 aaKnown RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 NOA1Q8NC60 698 aaKnown RBP13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 ESR2Q92731 530 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 PSMB7Q99436 277 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 SAR1BQ9Y6B6 198 aa13.3□□□□□ -0.28
R3HDM2-203ENST00000393811 A0A1B0GTH6 734 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 FAM205CA6NFA0 338 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 KCNJ18B7U540 433 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 SNAP23O00161 211 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 KCNJ12Q14500 433 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 CCDC96Q2M329 555 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 FAM76AQ8TAV0 307 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 CCDC51Q96ER9 411 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 PAGE5Q96GU1 130 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 SETD1AO15047 1707 aaKnown RBP13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 SRGAP2O75044 1071 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 IDEP14735 1019 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 CYLC1P35663 651 aaPredicted RBP13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 COPB1P53618 953 aaKnown RBP13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 TBX2Q13207 712 aaPredicted RBP13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 TTC38Q5R3I4 469 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 HDAC6Q9UBN7 1215 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 NWD1Q149M9 1564 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 KIAA0754O94854 1291 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 KRT31Q15323 416 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 PIK3AP1Q6ZUJ8 805 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 IGDCC4Q8TDY8 1250 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 ANKZF1Q9H8Y5 726 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 HEG1Q9ULI3 1381 aa13.29□□□□□ -0.28
R3HDM2-203ENST00000393811 TULP1O00294 542 aaPredicted RBP13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 TULP2O00295 520 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 EBAG9O00559 213 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 BMP15O95972 392 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 MED4Q9NPJ6 270 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 ATG3Q9NT62 314 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 GOLGA6CA6NDK9 693 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 GOLGA6DP0CG33 693 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 UBA7P41226 1012 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 KRT83P78385 493 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 GSPT2Q8IYD1 628 aaKnown RBP13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 OR8K1Q8NGG5 319 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 PPM1EQ8WY54 764 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 JAKMIP2Q96AA8 810 aa13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 STRBPQ96SI9 672 aaKnown RBP13.28□□□□□ -0.28
R3HDM2-203ENST00000393811 GOLGA6AQ9NYA3 693 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms