RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 CLASRPQ8N2M8 674 aaKnown RBP12.78□□□□□ -0.36
LAMB1-203ENST00000393560 ZNF570Q96NI8 536 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 PNKPQ96T60 521 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 HAUS2Q9NVX0 235 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 ZFATQ9P243 1243 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 C15orf41Q9Y2V0 281 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 WDR33Q9C0J8 1336 aaKnown RBP12.78□□□□□ -0.36
LAMB1-203ENST00000393560 FAM135BQ49AJ0 1406 aa12.78□□□□□ -0.36
LAMB1-203ENST00000393560 EIF3HO15372 352 aaKnown RBP eCLIP12.77□□□□□ -0.368e-7■■□□□ 11.7
LAMB1-203ENST00000393560 MAP3K13O43283 966 aa12.77□□□□□ -0.36
LAMB1-203ENST00000393560 SCG2P13521 617 aa12.77□□□□□ -0.36
LAMB1-203ENST00000393560 PRKAR2BP31323 418 aa12.77□□□□□ -0.36
LAMB1-203ENST00000393560 POLE2P56282 527 aa12.77□□□□□ -0.36
LAMB1-203ENST00000393560 BLMHQ13867 455 aa12.77□□□□□ -0.36
LAMB1-203ENST00000393560 PLCB4Q15147 1175 aa12.77□□□□□ -0.36
LAMB1-203ENST00000393560 TRIM65Q6PJ69 517 aa12.77□□□□□ -0.36
LAMB1-203ENST00000393560 NCCRP1Q6ZVX7 275 aaPredicted RBP12.77□□□□□ -0.36
LAMB1-203ENST00000393560 ERMNQ8TAM6 284 aa12.77□□□□□ -0.36
LAMB1-203ENST00000393560 OXCT2Q9BYC2 517 aaPredicted RBP12.77□□□□□ -0.36
LAMB1-203ENST00000393560 DNAJC25Q9H1X3 360 aa12.77□□□□□ -0.36
LAMB1-203ENST00000393560 TAOK3Q9H2K8 898 aa12.77□□□□□ -0.36
LAMB1-203ENST00000393560 SWAP70Q9UH65 585 aa12.77□□□□□ -0.36
LAMB1-203ENST00000393560 A0A1B0GVL5 298 aa12.77□□□□□ -0.37
LAMB1-203ENST00000393560 CLTAP09496 248 aa12.77□□□□□ -0.37
LAMB1-203ENST00000393560 BPIFB4P59827 614 aa12.77□□□□□ -0.37
LAMB1-203ENST00000393560 MXRA7P84157 204 aa12.77□□□□□ -0.37
LAMB1-203ENST00000393560 IRF5Q13568 498 aa12.77□□□□□ -0.37
LAMB1-203ENST00000393560 Q6ZUG5 572 aa12.77□□□□□ -0.37
LAMB1-203ENST00000393560 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.77□□□□□ -0.37
LAMB1-203ENST00000393560 FAM76AQ8TAV0 307 aa12.77□□□□□ -0.37
LAMB1-203ENST00000393560 JAKMIP2Q96AA8 810 aa12.77□□□□□ -0.37
LAMB1-203ENST00000393560 TECPR2O15040 1411 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 ACEP12821 1306 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 KCNA6P17658 529 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 ATP5JP18859 108 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 WDR75Q8IWA0 830 aaKnown RBP12.76□□□□□ -0.37
LAMB1-203ENST00000393560 MAIP1Q8WWC4 291 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 DDX19BQ9UMR2 479 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 GOLGA6L7A0A1B0GV03 622 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 PFDN1O60925 122 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 SUPT3HO75486 399 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 ANP32DO95626 131 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 WHAMMP3Q1A5X7 153 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 PEX5LQ8IYB4 626 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 ZBTB8BQ8NAP8 495 aaPredicted RBP12.76□□□□□ -0.37
LAMB1-203ENST00000393560 COG3Q96JB2 828 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 SLC39A3Q9BRY0 314 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 NUP62CLQ9H1M0 184 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 ANKZF1Q9H8Y5 726 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 EBF2Q9HAK2 575 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 ZBTB40Q9NUA8 1239 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 WDR35Q9P2L0 1181 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 BAIAP2L1Q9UHR4 511 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 TBX22Q9Y458 520 aa12.76□□□□□ -0.37
LAMB1-203ENST00000393560 DPPA5A6NC42 116 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 VDRP11473 427 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 BDNFP23560 247 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 NEK4P51957 841 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 PABPC1LQ4VXU2 614 aaKnown RBP12.75□□□□□ -0.37
LAMB1-203ENST00000393560 FAM117BQ6P1L5 589 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 TRIM50Q86XT4 487 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 GOLGA6L4A6NEF3 574 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 FGFR1OPO95684 399 aaKnown RBP12.75□□□□□ -0.37
LAMB1-203ENST00000393560 DYNC1I2Q13409 638 aaKnown RBP12.75□□□□□ -0.37
LAMB1-203ENST00000393560 CLPPQ16740 277 aaPredicted RBP12.75□□□□□ -0.37
LAMB1-203ENST00000393560 PI16Q6UXB8 463 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 SIRT2Q8IXJ6 389 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 IL17RAQ96F46 866 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 OSBPL1AQ9BXW6 950 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 ATP7BP35670 1465 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
LAMB1-203ENST00000393560 P4HA2O15460 535 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 ZFXP17010 805 aaPredicted RBP12.75□□□□□ -0.37
LAMB1-203ENST00000393560 PDE4BQ07343 736 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 KRT72Q14CN4 511 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 LCA5Q86VQ0 697 aa12.75□□□□□ -0.37
LAMB1-203ENST00000393560 CPS1P31327 1500 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 GRIN2DO15399 1336 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 HOXD12P35452 270 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 THOC7Q6I9Y2 204 aaKnown RBP12.74□□□□□ -0.37
LAMB1-203ENST00000393560 PTF1AQ7RTS3 328 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 SLC7A5P1Q8MH63 180 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 DDX12PQ92771 950 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.74□□□□□ -0.37
LAMB1-203ENST00000393560 SPDYE5A6NIY4 337 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 RASSF10A6NK89 507 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 LIN7AO14910 233 aaPredicted RBP12.74□□□□□ -0.37
LAMB1-203ENST00000393560 OXCT1P55809 520 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 SPATS2Q86XZ4 545 aaKnown RBP12.74□□□□□ -0.37
LAMB1-203ENST00000393560 OPTNQ96CV9 577 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 NOD2Q9HC29 1040 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 PCDH18Q9HCL0 1135 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 ATXN10Q9UBB4 475 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 CROTQ9UKG9 612 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 PRELID1Q9Y255 219 aa12.74□□□□□ -0.37
LAMB1-203ENST00000393560 RPAP1Q9BWH6 1393 aaPredicted RBP12.74□□□□□ -0.37
LAMB1-203ENST00000393560 EDC4Q6P2E9 1401 aaKnown RBP12.73□□□□□ -0.37
LAMB1-203ENST00000393560 MGRN1O60291 552 aa12.73□□□□□ -0.37
LAMB1-203ENST00000393560 WDHD1O75717 1129 aaPredicted RBP12.73□□□□□ -0.37
LAMB1-203ENST00000393560 GSDMDP57764 484 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms