RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 A0A1W2PRG0 241 aa16.71■□□□□ 0.27
CCDC57-204ENST00000392345 C19orf81C9J6K1 198 aa16.71■□□□□ 0.27
CCDC57-204ENST00000392345 HOXA7P31268 230 aaPredicted RBP16.71■□□□□ 0.27
CCDC57-204ENST00000392345 CDK8P49336 464 aa16.71■□□□□ 0.27
CCDC57-204ENST00000392345 FCGRTP55899 365 aa16.71■□□□□ 0.27
CCDC57-204ENST00000392345 IRX3P78415 501 aaPredicted RBP16.71■□□□□ 0.27
CCDC57-204ENST00000392345 PABPC4Q13310 644 aaKnown RBP eCLIP16.71■□□□□ 0.27
CCDC57-204ENST00000392345 AAMPQ13685 434 aa16.71■□□□□ 0.27
CCDC57-204ENST00000392345 FAM110CQ1W6H9 321 aa16.71■□□□□ 0.27
CCDC57-204ENST00000392345 POTEEQ6S8J3 1075 aa16.71■□□□□ 0.27
CCDC57-204ENST00000392345 C16orf86Q6ZW13 317 aa16.71■□□□□ 0.27
CCDC57-204ENST00000392345 C12orf42Q96LP6 360 aa16.71■□□□□ 0.27
CCDC57-204ENST00000392345 P2RX7Q99572 595 aaKnown RBP16.71■□□□□ 0.27
CCDC57-204ENST00000392345 TXNRD2Q9NNW7 524 aa16.71■□□□□ 0.27
CCDC57-204ENST00000392345 CABP5Q9NP86 173 aa16.71■□□□□ 0.27
CCDC57-204ENST00000392345 ZBTB47Q9UFB7 747 aaPredicted RBP16.71■□□□□ 0.27
CCDC57-204ENST00000392345 GNRH1P01148 92 aa16.7■□□□□ 0.26
CCDC57-204ENST00000392345 ZFYP08048 801 aaPredicted RBP16.7■□□□□ 0.26
CCDC57-204ENST00000392345 VCAM1P19320 739 aa16.7■□□□□ 0.26
CCDC57-204ENST00000392345 HERVK_113P62684 666 aa16.7■□□□□ 0.26
CCDC57-204ENST00000392345 ZMYM1Q5SVZ6 1142 aa16.7■□□□□ 0.26
CCDC57-204ENST00000392345 STK11IPQ8N1F8 1099 aa16.7■□□□□ 0.26
CCDC57-204ENST00000392345 KIAA1683Q9H0B3 1180 aa16.7■□□□□ 0.26
CCDC57-204ENST00000392345 SWAP70Q9UH65 585 aa16.7■□□□□ 0.26
CCDC57-204ENST00000392345 GCLCP48506 637 aaPredicted RBP16.69■□□□□ 0.26
CCDC57-204ENST00000392345 PRMT2P55345 433 aa16.69■□□□□ 0.26
CCDC57-204ENST00000392345 KIAA1755Q5JYT7 1200 aa16.69■□□□□ 0.26
CCDC57-204ENST00000392345 CCDC129Q6ZRS4 1044 aa16.69■□□□□ 0.26
CCDC57-204ENST00000392345 TMEM179Q6ZVK1 233 aa16.69■□□□□ 0.26
CCDC57-204ENST00000392345 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
CCDC57-204ENST00000392345 DDRGK1Q96HY6 314 aa16.69■□□□□ 0.26
CCDC57-204ENST00000392345 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
CCDC57-204ENST00000392345 ARPP21Q9UBL0 812 aaPredicted RBP16.69■□□□□ 0.26
CCDC57-204ENST00000392345 TNPO2O14787 897 aaKnown RBP16.68■□□□□ 0.26
CCDC57-204ENST00000392345 FOXP2O15409 715 aa16.68■□□□□ 0.26
CCDC57-204ENST00000392345 AMOTL1Q8IY63 956 aa16.68■□□□□ 0.26
CCDC57-204ENST00000392345 RAET1EQ8TD07 263 aa16.68■□□□□ 0.26
CCDC57-204ENST00000392345 MORF4L1Q9UBU8 362 aa16.68■□□□□ 0.26
CCDC57-204ENST00000392345 ROBO3Q96MS0 1386 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 MINDY4BA8MYZ0 360 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 HOXD10P28358 340 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 FLT3LGP49771 235 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 USP14P54578 494 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 NUCB1Q02818 461 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 ICA1Q05084 483 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 MTFR1Q15390 333 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 SBK1Q52WX2 424 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 CHD1LQ86WJ1 897 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC57-204ENST00000392345 RPAP3Q9H6T3 665 aaPredicted RBP16.67■□□□□ 0.26
CCDC57-204ENST00000392345 RBPJLQ9UBG7 517 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 MGAMO43451 1857 aa16.67■□□□□ 0.26
CCDC57-204ENST00000392345 CNMDO75829 334 aa16.66■□□□□ 0.26
CCDC57-204ENST00000392345 APPP05067 770 aa16.66■□□□□ 0.26
CCDC57-204ENST00000392345 ELNP15502 786 aa16.66■□□□□ 0.26
CCDC57-204ENST00000392345 EN2P19622 333 aaPredicted RBP16.66■□□□□ 0.26
CCDC57-204ENST00000392345 TDO2P48775 406 aa16.66■□□□□ 0.26
CCDC57-204ENST00000392345 LRRFIP1Q32MZ4 808 aaKnown RBP16.66■□□□□ 0.26
CCDC57-204ENST00000392345 GIMAP6Q6P9H5 292 aa16.66■□□□□ 0.26
CCDC57-204ENST00000392345 EVI5LQ96CN4 794 aa16.66■□□□□ 0.26
CCDC57-204ENST00000392345 PAGR1Q9BTK6 254 aa16.66■□□□□ 0.26
CCDC57-204ENST00000392345 A0A0D9SFI3 127 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 USP17L15C9J2P7 530 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 USP17L13C9JLJ4 530 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 USP17L11C9JVI0 530 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 USP17L18D6R9N7 530 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 USP17L22D6RA61 530 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 USP17L17D6RBQ6 530 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 USP17L19D6RCP7 530 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 USP17L20D6RJB6 530 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 GNAT2P19087 354 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 RASA1P20936 1047 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 GRK4P32298 578 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 USP17L24Q0WX57 530 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 Q3C1V9 767 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 VPS53Q5VIR6 699 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 CATSPERGQ6ZRH7 1159 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 NBPF11Q86T75 865 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 IFNL3Q8IZI9 196 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 FAM227BQ96M60 508 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 PORCNQ9H237 461 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 TAOK2Q9UL54 1235 aa16.65■□□□□ 0.26
CCDC57-204ENST00000392345 SPDYE16A6NNV3 312 aaPredicted RBP16.64■□□□□ 0.25
CCDC57-204ENST00000392345 PATL2C9JE40 543 aaKnown RBP16.64■□□□□ 0.25
CCDC57-204ENST00000392345 PRDM1O75626 825 aa16.64■□□□□ 0.25
CCDC57-204ENST00000392345 ERVK-9P63128 1117 aa16.64■□□□□ 0.25
CCDC57-204ENST00000392345 ERVK-24P63145 666 aa16.64■□□□□ 0.25
CCDC57-204ENST00000392345 PLEKHM2Q8IWE5 1019 aa16.64■□□□□ 0.25
CCDC57-204ENST00000392345 SPICE1Q8N0Z3 855 aa16.64■□□□□ 0.25
CCDC57-204ENST00000392345 RBBP6Q7Z6E9 1792 aaKnown RBP16.64■□□□□ 0.25
CCDC57-204ENST00000392345 ADCY3O60266 1144 aa16.63■□□□□ 0.25
CCDC57-204ENST00000392345 EEF2P13639 858 aaKnown RBP16.63■□□□□ 0.25
CCDC57-204ENST00000392345 ATP2B2Q01814 1243 aa16.63■□□□□ 0.25
CCDC57-204ENST00000392345 SLAIN1Q8ND83 568 aa16.63■□□□□ 0.25
CCDC57-204ENST00000392345 GPRC5AQ8NFJ5 357 aa16.63■□□□□ 0.25
CCDC57-204ENST00000392345 COA7Q96BR5 231 aa16.63■□□□□ 0.25
CCDC57-204ENST00000392345 BTBD7Q9P203 1132 aa16.63■□□□□ 0.25
CCDC57-204ENST00000392345 GJD2Q9UKL4 321 aa16.63■□□□□ 0.25
CCDC57-204ENST00000392345 TMX2Q9Y320 296 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms