RNA–Protein interactions for RNA: ENST00000392001.6

RAB17-202, Transcript of RAB17, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB17, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB17-202ENST00000392001 NTRK3Q16288 839 aa18.1■□□□□ 0.49
RAB17-202ENST00000392001 HACL1Q9UJ83 578 aa18.1■□□□□ 0.49
RAB17-202ENST00000392001 ZDHHC9Q9Y397 364 aa18.1■□□□□ 0.49
RAB17-202ENST00000392001 ASTN2O75129 1339 aaPredicted RBP18.1■□□□□ 0.49
RAB17-202ENST00000392001 PTPDC1A2A3K4 754 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 SYT1P21579 422 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 RASA3Q14644 834 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 CERKLQ49MI3 558 aaPredicted RBP18.09■□□□□ 0.49
RAB17-202ENST00000392001 DPY19L2Q6NUT2 758 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 TRPM4Q8TD43 1214 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 CEP95Q96GE4 821 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 TRIM34Q9BYJ4 488 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 MTMR4Q9NYA4 1195 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 GREB1LQ9C091 1923 aaPredicted RBP18.09■□□□□ 0.49
RAB17-202ENST00000392001 CCDC196A0A1B0GTZ2 297 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 FAM196BA6NMK8 535 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 CPLX1O14810 134 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 BRD1O95696 1058 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 PDCP20941 246 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 HIRAP54198 1017 aaPredicted RBP18.09■□□□□ 0.49
RAB17-202ENST00000392001 CCDC144CPQ8IYA2 1237 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 TEPSINQ96N21 525 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 MAP3K14Q99558 947 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 TMEM47Q9BQJ4 181 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 KAT14Q9H8E8 782 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 STX8Q9UNK0 236 aa18.09■□□□□ 0.49
RAB17-202ENST00000392001 FDPSP14324 419 aaKnown RBP18.08■□□□□ 0.48
RAB17-202ENST00000392001 RTN1Q16799 776 aa18.08■□□□□ 0.48
RAB17-202ENST00000392001 CDAN1Q8IWY9 1227 aa18.08■□□□□ 0.48
RAB17-202ENST00000392001 PNMA1Q8ND90 353 aa18.08■□□□□ 0.48
RAB17-202ENST00000392001 NUP133Q8WUM0 1156 aa18.08■□□□□ 0.48
RAB17-202ENST00000392001 L3MBTL3Q96JM7 780 aaPredicted RBP18.08■□□□□ 0.48
RAB17-202ENST00000392001 STX6O43752 255 aa18.07■□□□□ 0.48
RAB17-202ENST00000392001 CDKL5O76039 1030 aa18.07■□□□□ 0.48
RAB17-202ENST00000392001 LMOD1P29536 600 aaPredicted RBP18.07■□□□□ 0.48
RAB17-202ENST00000392001 LARP1BQ659C4 914 aaKnown RBP18.07■□□□□ 0.48
RAB17-202ENST00000392001 CPLX2Q6PUV4 134 aaKnown RBP18.07■□□□□ 0.48
RAB17-202ENST00000392001 DDX11Q96FC9 970 aa18.07■□□□□ 0.48
RAB17-202ENST00000392001 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.07■□□□□ 0.483e-23■■■□□ 19.1
RAB17-202ENST00000392001 ADARB2Q9NS39 739 aaKnown RBP18.07■□□□□ 0.48
RAB17-202ENST00000392001 TOP1P11387 765 aaKnown RBP18.07■□□□□ 0.48
RAB17-202ENST00000392001 IFNAR1P17181 557 aa18.07■□□□□ 0.48
RAB17-202ENST00000392001 TNPO1Q92973 898 aaKnown RBP18.07■□□□□ 0.48
RAB17-202ENST00000392001 DEFB129Q9H1M3 183 aa18.07■□□□□ 0.48
RAB17-202ENST00000392001 RBM28Q9NW13 759 aaKnown RBP18.07■□□□□ 0.48
RAB17-202ENST00000392001 KIF3AQ9Y496 699 aa18.07■□□□□ 0.48
RAB17-202ENST00000392001 WDR33Q9C0J8 1336 aaKnown RBP18.06■□□□□ 0.48
RAB17-202ENST00000392001 PPP4R3BQ5MIZ7 849 aa18.06■□□□□ 0.48
RAB17-202ENST00000392001 ANGEL2Q5VTE6 544 aaKnown RBP18.06■□□□□ 0.48
RAB17-202ENST00000392001 APOBEC3FQ8IUX4 373 aaKnown RBP18.06■□□□□ 0.48
RAB17-202ENST00000392001 GLTPD2A6NH11 291 aa18.05■□□□□ 0.48
RAB17-202ENST00000392001 TTLL1O95922 423 aa18.05■□□□□ 0.48
RAB17-202ENST00000392001 RRP1BQ14684 758 aaKnown RBP18.05■□□□□ 0.48
RAB17-202ENST00000392001 CLEC17AQ6ZS10 378 aa18.05■□□□□ 0.48
RAB17-202ENST00000392001 TMEM179Q6ZVK1 233 aa18.05■□□□□ 0.48
RAB17-202ENST00000392001 FAM184AQ8NB25 1140 aa18.05■□□□□ 0.48
RAB17-202ENST00000392001 SCAF8Q9UPN6 1271 aaKnown RBP18.05■□□□□ 0.48
RAB17-202ENST00000392001 MPHOSPH10O00566 681 aaKnown RBP18.04■□□□□ 0.48
RAB17-202ENST00000392001 FUT2Q10981 343 aa18.04■□□□□ 0.48
RAB17-202ENST00000392001 ABCB5Q2M3G0 1257 aa18.04■□□□□ 0.48
RAB17-202ENST00000392001 NBPF11Q86T75 865 aa18.04■□□□□ 0.48
RAB17-202ENST00000392001 KANSL2Q9H9L4 492 aa18.04■□□□□ 0.48
RAB17-202ENST00000392001 ORC3Q9UBD5 711 aaPredicted RBP18.04■□□□□ 0.48
RAB17-202ENST00000392001 MTMR6Q9Y217 621 aa18.04■□□□□ 0.48
RAB17-202ENST00000392001 PITPNM2Q9BZ72 1349 aa18.04■□□□□ 0.48
RAB17-202ENST00000392001 PPFIA3O75145 1194 aa18.04■□□□□ 0.48
RAB17-202ENST00000392001 FMNL1O95466 1100 aaPredicted RBP18.04■□□□□ 0.48
RAB17-202ENST00000392001 ZSCAN22P10073 491 aaPredicted RBP18.04■□□□□ 0.48
RAB17-202ENST00000392001 GUCY1A2P33402 732 aa18.04■□□□□ 0.48
RAB17-202ENST00000392001 CTCFLQ8NI51 663 aaPredicted RBP18.04■□□□□ 0.48
RAB17-202ENST00000392001 PHKBQ93100 1093 aa18.04■□□□□ 0.48
RAB17-202ENST00000392001 MKL1Q969V6 931 aa18.04■□□□□ 0.48
RAB17-202ENST00000392001 NYAP2Q9P242 653 aa18.04■□□□□ 0.48
RAB17-202ENST00000392001 STK36Q9NRP7 1315 aa18.03■□□□□ 0.48
RAB17-202ENST00000392001 KIF5BP33176 963 aa18.03■□□□□ 0.48
RAB17-202ENST00000392001 JAG1P78504 1218 aa18.03■□□□□ 0.48
RAB17-202ENST00000392001 GRM4Q14833 912 aa18.03■□□□□ 0.48
RAB17-202ENST00000392001 SHROOM1Q2M3G4 852 aaPredicted RBP18.03■□□□□ 0.48
RAB17-202ENST00000392001 MIGA2Q7L4E1 593 aa18.03■□□□□ 0.48
RAB17-202ENST00000392001 RGS22Q8NE09 1264 aa18.03■□□□□ 0.48
RAB17-202ENST00000392001 GGA3Q9NZ52 723 aa18.03■□□□□ 0.48
RAB17-202ENST00000392001 CLIP2Q9UDT6 1046 aa18.03■□□□□ 0.48
RAB17-202ENST00000392001 PPP2R3BQ9Y5P8 575 aa18.03■□□□□ 0.48
RAB17-202ENST00000392001 GDF11O95390 407 aa18.02■□□□□ 0.48
RAB17-202ENST00000392001 SSRP1Q08945 709 aaKnown RBP18.02■□□□□ 0.48
RAB17-202ENST00000392001 TMTC3Q6ZXV5 915 aa18.02■□□□□ 0.48
RAB17-202ENST00000392001 CLEC10AQ8IUN9 316 aa18.02■□□□□ 0.48
RAB17-202ENST00000392001 SIAH1Q8IUQ4 282 aa18.02■□□□□ 0.48
RAB17-202ENST00000392001 MAD2L2Q9UI95 211 aa18.02■□□□□ 0.48
RAB17-202ENST00000392001 PALM3A6NDB9 673 aaPredicted RBP18.02■□□□□ 0.47
RAB17-202ENST00000392001 PHF20L1A8MW92 1017 aa18.02■□□□□ 0.47
RAB17-202ENST00000392001 GH2P01242 217 aa18.02■□□□□ 0.47
RAB17-202ENST00000392001 SEPT2Q15019 361 aa18.02■□□□□ 0.47
RAB17-202ENST00000392001 CMTR1Q8N1G2 835 aaKnown RBP18.02■□□□□ 0.47
RAB17-202ENST00000392001 CABP5Q9NP86 173 aa18.02■□□□□ 0.47
RAB17-202ENST00000392001 PLEKHA8P1O95397 391 aa18.01■□□□□ 0.47
RAB17-202ENST00000392001 SNHG28P0DPA3 235 aa18.01■□□□□ 0.47
RAB17-202ENST00000392001 CAP2P40123 477 aa18.01■□□□□ 0.47
RAB17-202ENST00000392001 C1QTNF8P60827 252 aa18.01■□□□□ 0.47
RAB17-202ENST00000392001 USP50Q70EL3 339 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms