RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 FAM214BQ7L5A3 538 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 UBE3DQ7Z6J8 389 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 ANKLE2Q86XL3 938 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 CREG2Q8IUH2 290 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 SPPL2CQ8IUH8 684 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 PHACTR4Q8IZ21 702 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 FBXO15Q8NCQ5 510 aaPredicted RBP2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 ABHD4Q8TB40 342 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 CYB5D2Q8WUJ1 264 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 RNF141Q8WVD5 230 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 MYLIPQ8WY64 445 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 DPH2Q9BQC3 489 aaPredicted RBP2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 RSRP1Q9BUV0 290 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 EPB41L4BQ9H329 900 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 PRDM7Q9NQW5 492 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 TJP2Q9UDY2 1190 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 TMEM59LQ9UK28 342 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 ADAMTS6Q9UKP5 1117 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 CEP131Q9UPN4 1083 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 PCDHB5Q9Y5E4 795 aa2.34□□□□□ -2.03
SNORD28B-201ENST00000390993 FITM1A5D6W6 292 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 GFRA2O00451 464 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 TFE3P19532 575 aaPredicted RBP2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 ENDOUP21128 410 aaKnown RBP2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 PTPN11Q06124 597 aaPredicted RBP2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 TNK2Q07912 1038 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 RAD51AP2Q09MP3 1159 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 CAMK2GQ13555 558 aaPredicted RBP2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 MPP2Q14168 576 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 MEI1Q5TIA1 1274 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 RASIP1Q5U651 963 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 SYDE1Q6ZW31 735 aaPredicted RBP2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 LILRA2Q8N149 483 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 PHC3Q8NDX5 983 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 GATAD2BQ8WXI9 593 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 CCDC74BQ96LY2 380 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 TMEM74Q96NL1 305 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 ASPNQ9BXN1 380 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 SLC6A17Q9H1V8 727 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 DCP1AQ9NPI6 582 aaPredicted RBP2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 SEMA3GQ9NS98 782 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 KLHL3Q9UH77 587 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 SUPT16HQ9Y5B9 1047 aaKnown RBP2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 ST14Q9Y5Y6 855 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 U3KQE9 123 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 USP31Q70CQ4 1352 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 ROBO2Q9HCK4 1378 aa2.33□□□□□ -2.04
SNORD28B-201ENST00000390993 ZBTB7CA1YPR0 619 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 TCAF2A6NFQ2 919 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 MINDY4BA8MYZ0 360 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 PRR33A8MZF0 331 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 CILPO75339 1184 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 TSPAN15O95858 294 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 PF4P02776 101 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 RAG1P15918 1043 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 HK2P52789 917 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 JAG1P78504 1218 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 RBM10P98175 930 aaKnown RBP2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 EGR3Q06889 387 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 SLC14A2Q15849 920 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 ZNF124Q15973 351 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 LRRFIP1Q32MZ4 808 aaKnown RBP2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 TMEM201Q5SNT2 666 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 OLFML2BQ68BL8 750 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 TMEM132EQ6IEE7 984 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 BNC2Q6ZN30 1099 aaPredicted RBP2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 HS2ST1Q7LGA3 356 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 TSPYL5Q86VY4 417 aaPredicted RBP2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 WFDC3Q8IUB2 231 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 SLFN12Q8IYM2 578 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 GOLM1Q8NBJ4 401 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 PDZD8Q8NEN9 1154 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 ENOX1Q8TC92 643 aaKnown RBP2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 ACSF2Q96CM8 615 aaPredicted RBP2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 LIN37Q96GY3 246 aaPredicted RBP2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 SLC26A8Q96RN1 970 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 DIRC2Q96SL1 478 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 GPR62Q9BZJ7 368 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 NSUN3Q9H649 340 aaKnown RBP2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 CWC22Q9HCG8 908 aaKnown RBP2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 REV1Q9UBZ9 1251 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 TLR6Q9Y2C9 796 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 CARMIL2Q6F5E8 1435 aa2.32□□□□□ -2.04
SNORD28B-201ENST00000390993 GRIN3BO60391 1043 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 HTR3BO95264 441 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 F13A1P00488 732 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 CDK8P49336 464 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 ZNF165P49910 485 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 FAM160A1Q05DH4 1040 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 TMEM62Q0P6H9 643 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 SNX17Q15036 470 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 CIAPIN1Q6FI81 312 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 REC114Q7Z4M0 266 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 IRF2BP1Q8IU81 584 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 KRTAP19-1Q8IUB9 90 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 ANKS4BQ8N8V4 417 aa2.31□□□□□ -2.04
SNORD28B-201ENST00000390993 DTWD2Q8NBA8 298 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms